RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 COG2Q14746 738 aa14.96□□□□□ -0.01
BRAT1-203ENST00000467558 ADAT2Q7Z6V5 191 aaKnown RBP14.96□□□□□ -0.01
BRAT1-203ENST00000467558 RBM46Q8TBY0 533 aaKnown RBP14.96□□□□□ -0.01
BRAT1-203ENST00000467558 RTFDC1Q9BY42 306 aaPredicted RBP14.96□□□□□ -0.01
BRAT1-203ENST00000467558 TUFT1Q9NNX1 390 aa14.96□□□□□ -0.01
BRAT1-203ENST00000467558 MAD2L2Q9UI95 211 aa14.96□□□□□ -0.01
BRAT1-203ENST00000467558 FCER1AP12319 257 aa14.96□□□□□ -0.02
BRAT1-203ENST00000467558 IL1R1P14778 569 aa14.96□□□□□ -0.02
BRAT1-203ENST00000467558 DPEP1P16444 411 aa14.96□□□□□ -0.02
BRAT1-203ENST00000467558 GBP1P32455 592 aa14.96□□□□□ -0.02
BRAT1-203ENST00000467558 ZDHHC15Q96MV8 337 aa14.96□□□□□ -0.02
BRAT1-203ENST00000467558 C7orf25Q9BPX7 421 aa14.96□□□□□ -0.02
BRAT1-203ENST00000467558 MSTO1Q9BUK6 570 aa14.96□□□□□ -0.02
BRAT1-203ENST00000467558 SALL1Q9NSC2 1324 aa14.96□□□□□ -0.02
BRAT1-203ENST00000467558 THAP12O43422 761 aa14.95□□□□□ -0.02
BRAT1-203ENST00000467558 VIMP08670 466 aaKnown RBP14.95□□□□□ -0.02
BRAT1-203ENST00000467558 GUCY2DQ02846 1103 aa14.95□□□□□ -0.02
BRAT1-203ENST00000467558 ADGRA1Q86SQ6 560 aa14.95□□□□□ -0.02
BRAT1-203ENST00000467558 CCDC125Q86Z20 511 aa14.95□□□□□ -0.02
BRAT1-203ENST00000467558 ELOA2Q8IYF1 753 aaPredicted RBP14.95□□□□□ -0.02
BRAT1-203ENST00000467558 VGLL2Q8N8G2 317 aa14.95□□□□□ -0.02
BRAT1-203ENST00000467558 RSAD2Q8WXG1 361 aa14.95□□□□□ -0.02
BRAT1-203ENST00000467558 PGRMC1O00264 195 aaKnown RBP14.95□□□□□ -0.02
BRAT1-203ENST00000467558 SLC26A4O43511 780 aa14.95□□□□□ -0.02
BRAT1-203ENST00000467558 RHOBTB3O94955 611 aa14.95□□□□□ -0.02
BRAT1-203ENST00000467558 MOCS3O95396 460 aa14.95□□□□□ -0.02
BRAT1-203ENST00000467558 MAPK4P31152 587 aa14.95□□□□□ -0.02
BRAT1-203ENST00000467558 SCYL2Q6P3W7 929 aa14.95□□□□□ -0.02
BRAT1-203ENST00000467558 ADSSL1Q8N142 457 aa14.95□□□□□ -0.02
BRAT1-203ENST00000467558 SPON1Q9HCB6 807 aa14.95□□□□□ -0.02
BRAT1-203ENST00000467558 MRPL47Q9HD33 250 aaKnown RBP14.95□□□□□ -0.02
BRAT1-203ENST00000467558 PCDHA10Q9Y5I2 948 aa14.95□□□□□ -0.02
BRAT1-203ENST00000467558 RPS12P25398 132 aaKnown RBP14.95□□□□□ -0.02
BRAT1-203ENST00000467558 MTMR2Q13614 643 aa14.95□□□□□ -0.02
BRAT1-203ENST00000467558 PPP1R21Q6ZMI0 780 aa14.95□□□□□ -0.02
BRAT1-203ENST00000467558 DAGLBQ8NCG7 672 aa14.95□□□□□ -0.02
BRAT1-203ENST00000467558 POLD4Q9HCU8 107 aa14.95□□□□□ -0.02
BRAT1-203ENST00000467558 GABBR1Q9UBS5 961 aa14.95□□□□□ -0.02
BRAT1-203ENST00000467558 ANKRD26Q9UPS8 1709 aa14.95□□□□□ -0.02
BRAT1-203ENST00000467558 TTC26A0AVF1 554 aa14.95□□□□□ -0.02
BRAT1-203ENST00000467558 C19orf81C9J6K1 198 aa14.95□□□□□ -0.02
BRAT1-203ENST00000467558 ALDH3A1P30838 453 aa14.95□□□□□ -0.02
BRAT1-203ENST00000467558 ADCY8P40145 1251 aa14.95□□□□□ -0.02
BRAT1-203ENST00000467558 EZH2Q15910 746 aaKnown RBP14.95□□□□□ -0.02
BRAT1-203ENST00000467558 NAA35Q5VZE5 725 aa14.95□□□□□ -0.02
BRAT1-203ENST00000467558 B4GALNT4Q76KP1 1039 aa14.95□□□□□ -0.02
BRAT1-203ENST00000467558 FBF1Q8TES7 1133 aa14.95□□□□□ -0.02
BRAT1-203ENST00000467558 NLRP4Q96MN2 994 aa14.95□□□□□ -0.02
BRAT1-203ENST00000467558 RUNDC3BQ96NL0 473 aa14.95□□□□□ -0.02
BRAT1-203ENST00000467558 KRT12Q99456 494 aa14.95□□□□□ -0.02
BRAT1-203ENST00000467558 TEX13BQ9BXU2 312 aa14.95□□□□□ -0.02
BRAT1-203ENST00000467558 DPH5Q9H2P9 285 aa14.95□□□□□ -0.02
BRAT1-203ENST00000467558 DNAJC12Q9UKB3 198 aa14.95□□□□□ -0.02
BRAT1-203ENST00000467558 MARK3P27448 753 aa14.94□□□□□ -0.02
BRAT1-203ENST00000467558 COPB2P35606 906 aa14.94□□□□□ -0.02
BRAT1-203ENST00000467558 KRT81Q14533 505 aa14.94□□□□□ -0.02
BRAT1-203ENST00000467558 C2orf69Q8N8R5 385 aa14.94□□□□□ -0.02
BRAT1-203ENST00000467558 NLRP7Q8WX94 980 aa14.94□□□□□ -0.02
BRAT1-203ENST00000467558 MAGOHBQ96A72 148 aaKnown RBP14.94□□□□□ -0.02
BRAT1-203ENST00000467558 OTUD5Q96G74 571 aa14.94□□□□□ -0.02
BRAT1-203ENST00000467558 PBKQ96KB5 322 aa14.94□□□□□ -0.02
BRAT1-203ENST00000467558 RPS6KC1Q96S38 1066 aa14.94□□□□□ -0.02
BRAT1-203ENST00000467558 CAMTA1Q9Y6Y1 1673 aa14.94□□□□□ -0.02
BRAT1-203ENST00000467558 CAPN9O14815 690 aa14.94□□□□□ -0.02
BRAT1-203ENST00000467558 ATP8B1O43520 1251 aa14.94□□□□□ -0.02
BRAT1-203ENST00000467558 LGSNQ5TDP6 509 aa14.94□□□□□ -0.02
BRAT1-203ENST00000467558 EDEM3Q9BZQ6 932 aa14.94□□□□□ -0.02
BRAT1-203ENST00000467558 TMEM60Q9H2L4 133 aa14.94□□□□□ -0.02
BRAT1-203ENST00000467558 FTCDO95954 541 aa14.94□□□□□ -0.02
BRAT1-203ENST00000467558 SETDB1Q15047 1291 aa14.94□□□□□ -0.02
BRAT1-203ENST00000467558 PTPAQ15257 358 aa14.94□□□□□ -0.02
BRAT1-203ENST00000467558 SWSAP1Q6NVH7 229 aa14.94□□□□□ -0.02
BRAT1-203ENST00000467558 ZBTB33Q86T24 672 aa14.94□□□□□ -0.02
BRAT1-203ENST00000467558 SESTD1Q86VW0 696 aa14.94□□□□□ -0.02
BRAT1-203ENST00000467558 PLCD4Q9BRC7 762 aa14.94□□□□□ -0.02
BRAT1-203ENST00000467558 MED10Q9BTT4 135 aa14.94□□□□□ -0.02
BRAT1-203ENST00000467558 MED4Q9NPJ6 270 aa14.94□□□□□ -0.02
BRAT1-203ENST00000467558 NXF1Q9UBU9 619 aaKnown RBP14.94□□□□□ -0.02
BRAT1-203ENST00000467558 LIMA1Q9UHB6 759 aaKnown RBP14.94□□□□□ -0.02
BRAT1-203ENST00000467558 CCDC151A5D8V7 595 aa14.93□□□□□ -0.02
BRAT1-203ENST00000467558 LRRC53A6NM62 1247 aa14.93□□□□□ -0.02
BRAT1-203ENST00000467558 SLC16A4O15374 487 aa14.93□□□□□ -0.02
BRAT1-203ENST00000467558 HSPA6P17066 643 aa14.93□□□□□ -0.02
BRAT1-203ENST00000467558 MKRN3Q13064 507 aaKnown RBP14.93□□□□□ -0.02
BRAT1-203ENST00000467558 NTRK3Q16288 839 aa14.93□□□□□ -0.02
BRAT1-203ENST00000467558 MAPK6Q16659 721 aa14.93□□□□□ -0.02
BRAT1-203ENST00000467558 ANKRD40Q6AI12 368 aa14.93□□□□□ -0.02
BRAT1-203ENST00000467558 TOGARAM2Q6ZUX3 1019 aa14.93□□□□□ -0.02
BRAT1-203ENST00000467558 MRRFQ96E11 262 aaKnown RBP14.93□□□□□ -0.02
BRAT1-203ENST00000467558 APOL6Q9BWW8 343 aa14.93□□□□□ -0.02
BRAT1-203ENST00000467558 RGL1Q9NZL6 768 aa14.93□□□□□ -0.02
BRAT1-203ENST00000467558 PASKQ96RG2 1323 aa14.93□□□□□ -0.02
BRAT1-203ENST00000467558 DENND3A2RUS2 1198 aa14.93□□□□□ -0.02
BRAT1-203ENST00000467558 CLDN3O15551 220 aa14.93□□□□□ -0.02
BRAT1-203ENST00000467558 MAN1A1P33908 653 aa14.93□□□□□ -0.02
BRAT1-203ENST00000467558 NFIAQ12857 509 aa14.93□□□□□ -0.02
BRAT1-203ENST00000467558 MAP7D3Q8IWC1 876 aa14.93□□□□□ -0.02
BRAT1-203ENST00000467558 BBOF1Q8ND07 529 aa14.93□□□□□ -0.02
BRAT1-203ENST00000467558 ZNF280CQ8ND82 737 aa14.93□□□□□ -0.02
BRAT1-203ENST00000467558 GABPB2Q8TAK5 448 aaPredicted RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms