RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 CKBP12277 381 aa16.31■□□□□ 0.2
SQSTM1-205ENST00000464493 PSMC5P62195 406 aa16.31■□□□□ 0.2
SQSTM1-205ENST00000464493 FPGSQ05932 587 aa16.31■□□□□ 0.2
SQSTM1-205ENST00000464493 PTGDRQ13258 359 aa16.31■□□□□ 0.2
SQSTM1-205ENST00000464493 UGCGQ16739 394 aa16.31■□□□□ 0.2
SQSTM1-205ENST00000464493 ZNF484Q5JVG2 852 aa16.31■□□□□ 0.2
SQSTM1-205ENST00000464493 BANK1Q8NDB2 785 aa16.31■□□□□ 0.2
SQSTM1-205ENST00000464493 WNT8BQ93098 351 aa16.31■□□□□ 0.2
SQSTM1-205ENST00000464493 WNT8AQ9H1J5 351 aa16.31■□□□□ 0.2
SQSTM1-205ENST00000464493 PRO3102Q9H379 93 aa16.31■□□□□ 0.2
SQSTM1-205ENST00000464493 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.31■□□□□ 0.2
SQSTM1-205ENST00000464493 TUBE1Q9UJT0 475 aa16.31■□□□□ 0.2
SQSTM1-205ENST00000464493 COLQQ9Y215 455 aaPredicted RBP16.31■□□□□ 0.2
SQSTM1-205ENST00000464493 MTMR6Q9Y217 621 aa16.31■□□□□ 0.2
SQSTM1-205ENST00000464493 COL1A2P08123 1366 aa16.3■□□□□ 0.2
SQSTM1-205ENST00000464493 MBLAC1A4D2B0 266 aaPredicted RBP16.3■□□□□ 0.2
SQSTM1-205ENST00000464493 LAD1O00515 517 aa16.3■□□□□ 0.2
SQSTM1-205ENST00000464493 DKC1O60832 514 aaKnown RBP eCLIP16.3■□□□□ 0.2
SQSTM1-205ENST00000464493 OATP04181 439 aa16.3■□□□□ 0.2
SQSTM1-205ENST00000464493 IQCF3P0C7M6 154 aa16.3■□□□□ 0.2
SQSTM1-205ENST00000464493 PDIA4P13667 645 aaKnown RBP16.3■□□□□ 0.2
SQSTM1-205ENST00000464493 CSF2RAP15509 400 aa16.3■□□□□ 0.2
SQSTM1-205ENST00000464493 SELPP16109 830 aa16.3■□□□□ 0.2
SQSTM1-205ENST00000464493 THPOP40225 353 aa16.3■□□□□ 0.2
SQSTM1-205ENST00000464493 TECP42680 631 aa16.3■□□□□ 0.2
SQSTM1-205ENST00000464493 QARSP47897 775 aaKnown RBP16.3■□□□□ 0.2
SQSTM1-205ENST00000464493 PRKCEQ02156 737 aa16.3■□□□□ 0.2
SQSTM1-205ENST00000464493 RBL2Q08999 1139 aa16.3■□□□□ 0.2
SQSTM1-205ENST00000464493 PPIGQ13427 754 aaKnown RBP eCLIP16.3■□□□□ 0.29e-12■■□□□ 13.5
SQSTM1-205ENST00000464493 TRIM71Q2Q1W2 868 aaKnown RBP16.3■□□□□ 0.2
SQSTM1-205ENST00000464493 TAF2Q6P1X5 1199 aa16.3■□□□□ 0.2
SQSTM1-205ENST00000464493 TRAPPC12Q8WVT3 735 aa16.3■□□□□ 0.2
SQSTM1-205ENST00000464493 SCLYQ96I15 445 aa16.3■□□□□ 0.2
SQSTM1-205ENST00000464493 CEP131Q9UPN4 1083 aa16.3■□□□□ 0.2
SQSTM1-205ENST00000464493 ZBTB42B2RXF5 422 aa16.29■□□□□ 0.2
SQSTM1-205ENST00000464493 KLRC1P26715 233 aa16.29■□□□□ 0.2
SQSTM1-205ENST00000464493 BECN1Q14457 450 aa16.29■□□□□ 0.2
SQSTM1-205ENST00000464493 XKR3Q5GH77 459 aa16.29■□□□□ 0.2
SQSTM1-205ENST00000464493 MTHFD1LQ6UB35 978 aa16.29■□□□□ 0.2
SQSTM1-205ENST00000464493 RUFY4Q6ZNE9 571 aa16.29■□□□□ 0.2
SQSTM1-205ENST00000464493 DYDC2Q96IM9 177 aa16.29■□□□□ 0.2
SQSTM1-205ENST00000464493 EIF2AK1Q9BQI3 630 aaKnown RBP16.29■□□□□ 0.2
SQSTM1-205ENST00000464493 RGL1Q9NZL6 768 aa16.29■□□□□ 0.2
SQSTM1-205ENST00000464493 PCDHA2Q9Y5H9 948 aa16.29■□□□□ 0.2
SQSTM1-205ENST00000464493 POTEMA6NI47 508 aa16.28■□□□□ 0.2
SQSTM1-205ENST00000464493 DDX11L8A8MPP1 907 aa16.28■□□□□ 0.2
SQSTM1-205ENST00000464493 CAND2O75155 1236 aa16.28■□□□□ 0.2
SQSTM1-205ENST00000464493 SLITRK3O94933 977 aa16.28■□□□□ 0.2
SQSTM1-205ENST00000464493 STBD1O95210 358 aa16.28■□□□□ 0.2
SQSTM1-205ENST00000464493 EPHB4P54760 987 aa16.28■□□□□ 0.2
SQSTM1-205ENST00000464493 RESTQ13127 1097 aa16.28■□□□□ 0.2
SQSTM1-205ENST00000464493 CTTNQ14247 550 aaKnown RBP16.28■□□□□ 0.2
SQSTM1-205ENST00000464493 TMEM266Q2M3C6 531 aa16.28■□□□□ 0.2
SQSTM1-205ENST00000464493 ZNF618Q5T7W0 954 aa16.28■□□□□ 0.2
SQSTM1-205ENST00000464493 LRRC8DQ7L1W4 858 aa16.28■□□□□ 0.2
SQSTM1-205ENST00000464493 RSPH3Q86UC2 560 aa16.28■□□□□ 0.2
SQSTM1-205ENST00000464493 RPUSD2Q8IZ73 545 aaKnown RBP16.28■□□□□ 0.2
SQSTM1-205ENST00000464493 ZBTB10Q96DT7 871 aa16.28■□□□□ 0.2
SQSTM1-205ENST00000464493 HSD17B14Q9BPX1 270 aa16.28■□□□□ 0.2
SQSTM1-205ENST00000464493 LXNQ9BS40 222 aa16.28■□□□□ 0.2
SQSTM1-205ENST00000464493 NIFKQ9BYG3 293 aaKnown RBP16.28■□□□□ 0.2
SQSTM1-205ENST00000464493 ZSCAN16Q9H4T2 348 aaPredicted RBP16.28■□□□□ 0.2
SQSTM1-205ENST00000464493 ZSWIM4Q9H7M6 989 aa16.28■□□□□ 0.2
SQSTM1-205ENST00000464493 IL23AQ9NPF7 189 aa16.28■□□□□ 0.2
SQSTM1-205ENST00000464493 RSPH10B2B2RC85 870 aa16.27■□□□□ 0.2
SQSTM1-205ENST00000464493 PARNO95453 639 aaKnown RBP16.27■□□□□ 0.2
SQSTM1-205ENST00000464493 RPLP2P05387 115 aaKnown RBP16.27■□□□□ 0.2
SQSTM1-205ENST00000464493 RSPH10BP0C881 870 aa16.27■□□□□ 0.2
SQSTM1-205ENST00000464493 ACRP10323 421 aa16.27■□□□□ 0.2
SQSTM1-205ENST00000464493 RFC2P35250 354 aa16.27■□□□□ 0.2
SQSTM1-205ENST00000464493 PRPHP41219 470 aa16.27■□□□□ 0.2
SQSTM1-205ENST00000464493 FXR2P51116 673 aaKnown RBP eCLIP16.27■□□□□ 0.23e-7■■□□□ 12.6
SQSTM1-205ENST00000464493 ATP2C1P98194 919 aaPredicted RBP16.27■□□□□ 0.2
SQSTM1-205ENST00000464493 CYP4A11Q02928 519 aa16.27■□□□□ 0.2
SQSTM1-205ENST00000464493 PDIA5Q14554 519 aa16.27■□□□□ 0.2
SQSTM1-205ENST00000464493 DTHD1Q6ZMT9 781 aa16.27■□□□□ 0.2
SQSTM1-205ENST00000464493 C16orf59Q7L2K0 433 aa16.27■□□□□ 0.2
SQSTM1-205ENST00000464493 RPAINQ86UA6 219 aa16.27■□□□□ 0.2
SQSTM1-205ENST00000464493 TPH2Q8IWU9 490 aa16.27■□□□□ 0.2
SQSTM1-205ENST00000464493 C4orf19Q8IY42 314 aa16.27■□□□□ 0.2
SQSTM1-205ENST00000464493 NEK9Q8TD19 979 aa16.27■□□□□ 0.2
SQSTM1-205ENST00000464493 DNAJB3Q8WWF6 145 aa16.27■□□□□ 0.2
SQSTM1-205ENST00000464493 WRAP73Q9P2S5 460 aaPredicted RBP16.27■□□□□ 0.2
SQSTM1-205ENST00000464493 SEPT9Q9UHD8 586 aaPredicted RBP16.27■□□□□ 0.2
SQSTM1-205ENST00000464493 SMIM35A0A1B0GVV1 85 aa16.26■□□□□ 0.19
SQSTM1-205ENST00000464493 MAGEB2O15479 319 aa16.26■□□□□ 0.19
SQSTM1-205ENST00000464493 C22orf31O95567 290 aa16.26■□□□□ 0.19
SQSTM1-205ENST00000464493 TARBP2Q15633 366 aaKnown RBP16.26■□□□□ 0.19
SQSTM1-205ENST00000464493 TRAF7Q6Q0C0 670 aa16.26■□□□□ 0.19
SQSTM1-205ENST00000464493 ANO5Q75V66 913 aa16.26■□□□□ 0.19
SQSTM1-205ENST00000464493 DEFB128Q7Z7B8 93 aa16.26■□□□□ 0.19
SQSTM1-205ENST00000464493 TDHQ8IZJ6 230 aa16.26■□□□□ 0.19
SQSTM1-205ENST00000464493 ERMNQ8TAM6 284 aa16.26■□□□□ 0.19
SQSTM1-205ENST00000464493 RAB34Q9BZG1 259 aa16.26■□□□□ 0.19
SQSTM1-205ENST00000464493 FAM49AQ9H0Q0 323 aaPredicted RBP16.26■□□□□ 0.19
SQSTM1-205ENST00000464493 LRWD1Q9UFC0 647 aa16.26■□□□□ 0.19
SQSTM1-205ENST00000464493 SCN5AQ14524 2016 aa16.26■□□□□ 0.19
SQSTM1-205ENST00000464493 EVPLQ92817 2033 aa16.26■□□□□ 0.19
SQSTM1-205ENST00000464493 TANC1Q9C0D5 1861 aa16.25■□□□□ 0.19
SQSTM1-205ENST00000464493 A0A1W2PPC1 479 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms