RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 MSH4O15457 936 aa19.81■□□□□ 0.76
SCARNA2-201ENST00000458748 CTDNEP1O95476 244 aa19.81■□□□□ 0.76
SCARNA2-201ENST00000458748 CTSHP09668 335 aa19.81■□□□□ 0.76
SCARNA2-201ENST00000458748 GCFC2P16383 781 aaKnown RBP19.81■□□□□ 0.76
SCARNA2-201ENST00000458748 IGFBP4P22692 258 aa19.81■□□□□ 0.76
SCARNA2-201ENST00000458748 CYP3A7P24462 503 aa19.81■□□□□ 0.76
SCARNA2-201ENST00000458748 JAK3P52333 1124 aa19.81■□□□□ 0.76
SCARNA2-201ENST00000458748 MARCH8Q5T0T0 291 aa19.81■□□□□ 0.76
SCARNA2-201ENST00000458748 LRCH2Q5VUJ6 765 aa19.81■□□□□ 0.76
SCARNA2-201ENST00000458748 IER5Q5VY09 327 aa19.81■□□□□ 0.76
SCARNA2-201ENST00000458748 SWSAP1Q6NVH7 229 aa19.81■□□□□ 0.76
SCARNA2-201ENST00000458748 CKAP2LQ8IYA6 745 aa19.81■□□□□ 0.76
SCARNA2-201ENST00000458748 DBF4BQ8NFT6 615 aa19.81■□□□□ 0.76
SCARNA2-201ENST00000458748 ATP8B4Q8TF62 1192 aa19.81■□□□□ 0.76
SCARNA2-201ENST00000458748 APBB2Q92870 758 aa19.81■□□□□ 0.76
SCARNA2-201ENST00000458748 LENG9Q96B70 501 aa19.81■□□□□ 0.76
SCARNA2-201ENST00000458748 CEP131Q9UPN4 1083 aa19.81■□□□□ 0.76
SCARNA2-201ENST00000458748 COL1A2P08123 1366 aa19.81■□□□□ 0.76
SCARNA2-201ENST00000458748 TLL1O43897 1013 aa19.8■□□□□ 0.76
SCARNA2-201ENST00000458748 AMHP03971 560 aa19.8■□□□□ 0.76
SCARNA2-201ENST00000458748 CA3P07451 260 aa19.8■□□□□ 0.76
SCARNA2-201ENST00000458748 KRT2P35908 639 aa19.8■□□□□ 0.76
SCARNA2-201ENST00000458748 MKRN4PQ13434 485 aaPredicted RBP19.8■□□□□ 0.76
SCARNA2-201ENST00000458748 TCTN1Q2MV58 587 aa19.8■□□□□ 0.76
SCARNA2-201ENST00000458748 ZNF484Q5JVG2 852 aa19.8■□□□□ 0.76
SCARNA2-201ENST00000458748 NEK8Q86SG6 692 aa19.8■□□□□ 0.76
SCARNA2-201ENST00000458748 BBXQ8WY36 941 aaPredicted RBP19.8■□□□□ 0.76
SCARNA2-201ENST00000458748 SLC5A5Q92911 643 aa19.8■□□□□ 0.76
SCARNA2-201ENST00000458748 FAM167AQ96KS9 214 aa19.8■□□□□ 0.76
SCARNA2-201ENST00000458748 ZBED2Q9BTP6 218 aa19.8■□□□□ 0.76
SCARNA2-201ENST00000458748 CHD7Q9P2D1 2997 aa19.8■□□□□ 0.76
SCARNA2-201ENST00000458748 PCDHA2Q9Y5H9 948 aa19.8■□□□□ 0.76
SCARNA2-201ENST00000458748 MYH9P35579 1960 aaKnown RBP19.8■□□□□ 0.76
SCARNA2-201ENST00000458748 TRANK1O15050 2925 aa19.8■□□□□ 0.76
SCARNA2-201ENST00000458748 GJB5O95377 273 aa19.79■□□□□ 0.76
SCARNA2-201ENST00000458748 DEFB103AP81534 67 aa19.79■□□□□ 0.76
SCARNA2-201ENST00000458748 CCDC85BQ15834 202 aaPredicted RBP19.79■□□□□ 0.76
SCARNA2-201ENST00000458748 INF2Q27J81 1249 aa19.79■□□□□ 0.76
SCARNA2-201ENST00000458748 RUFY4Q6ZNE9 571 aa19.79■□□□□ 0.76
SCARNA2-201ENST00000458748 CCDC60Q8IWA6 550 aaPredicted RBP19.79■□□□□ 0.76
SCARNA2-201ENST00000458748 NME8Q8N427 588 aa19.79■□□□□ 0.76
SCARNA2-201ENST00000458748 NSUN7Q8NE18 718 aaKnown RBP19.79■□□□□ 0.76
SCARNA2-201ENST00000458748 RDM1Q8NG50 284 aa19.79■□□□□ 0.76
SCARNA2-201ENST00000458748 RAD9AQ99638 391 aa19.79■□□□□ 0.76
SCARNA2-201ENST00000458748 LLPHQ9BRT6 129 aaKnown RBP19.79■□□□□ 0.76
SCARNA2-201ENST00000458748 SH2B1Q9NRF2 756 aaPredicted RBP19.79■□□□□ 0.76
SCARNA2-201ENST00000458748 DISC1Q9NRI5 854 aa19.79■□□□□ 0.76
SCARNA2-201ENST00000458748 DDX25Q9UHL0 483 aaKnown RBP19.79■□□□□ 0.76
SCARNA2-201ENST00000458748 MAFBQ9Y5Q3 323 aaPredicted RBP19.79■□□□□ 0.76
SCARNA2-201ENST00000458748 CHRNA1P02708 482 aa19.78■□□□□ 0.76
SCARNA2-201ENST00000458748 RBM25P49756 843 aaKnown RBP19.78■□□□□ 0.76
SCARNA2-201ENST00000458748 NPY5RQ15761 445 aa19.78■□□□□ 0.76
SCARNA2-201ENST00000458748 LETM2Q2VYF4 491 aa19.78■□□□□ 0.76
SCARNA2-201ENST00000458748 FAM43BQ6ZT52 329 aaPredicted RBP19.78■□□□□ 0.76
SCARNA2-201ENST00000458748 DNAJB3Q8WWF6 145 aa19.78■□□□□ 0.76
SCARNA2-201ENST00000458748 UIMC1Q96RL1 719 aa19.78■□□□□ 0.76
SCARNA2-201ENST00000458748 NRBP2Q9NSY0 501 aa19.78■□□□□ 0.76
SCARNA2-201ENST00000458748 SIP14410 1827 aa19.77■□□□□ 0.76
SCARNA2-201ENST00000458748 WDR81Q562E7 1941 aa19.77■□□□□ 0.76
SCARNA2-201ENST00000458748 SMIM35A0A1B0GVV1 85 aa19.77■□□□□ 0.76
SCARNA2-201ENST00000458748 RBAK-RBAKDNI3L0D1 243 aa19.77■□□□□ 0.76
SCARNA2-201ENST00000458748 ST18O60284 1047 aa19.77■□□□□ 0.76
SCARNA2-201ENST00000458748 MARCH6O60337 910 aa19.77■□□□□ 0.76
SCARNA2-201ENST00000458748 LARGE1O95461 756 aa19.77■□□□□ 0.76
SCARNA2-201ENST00000458748 TDP2O95551 362 aa19.77■□□□□ 0.76
SCARNA2-201ENST00000458748 MRPS6P82932 125 aaKnown RBP19.77■□□□□ 0.76
SCARNA2-201ENST00000458748 TAP1Q03518 808 aa19.77■□□□□ 0.76
SCARNA2-201ENST00000458748 MGAT3Q09327 533 aa19.77■□□□□ 0.76
SCARNA2-201ENST00000458748 RABEP1Q15276 862 aa19.77■□□□□ 0.76
SCARNA2-201ENST00000458748 SAFBQ15424 915 aaKnown RBP eCLIP19.77■□□□□ 0.76
SCARNA2-201ENST00000458748 PPP4R3AQ6IN85 833 aa19.77■□□□□ 0.76
SCARNA2-201ENST00000458748 MTHFD1LQ6UB35 978 aa19.77■□□□□ 0.76
SCARNA2-201ENST00000458748 PIK3AP1Q6ZUJ8 805 aa19.77■□□□□ 0.76
SCARNA2-201ENST00000458748 FAM20AQ96MK3 541 aa19.77■□□□□ 0.76
SCARNA2-201ENST00000458748 MBOAT7Q96N66 472 aa19.77■□□□□ 0.76
SCARNA2-201ENST00000458748 IFIH1Q9BYX4 1025 aaKnown RBP19.77■□□□□ 0.76
SCARNA2-201ENST00000458748 FAM49AQ9H0Q0 323 aaPredicted RBP19.77■□□□□ 0.76
SCARNA2-201ENST00000458748 GABBR1Q9UBS5 961 aa19.77■□□□□ 0.76
SCARNA2-201ENST00000458748 SQORQ9Y6N5 450 aa19.77■□□□□ 0.76
SCARNA2-201ENST00000458748 TTC28Q96AY4 2481 aa19.76■□□□□ 0.75
SCARNA2-201ENST00000458748 CHMP2AO43633 222 aa19.76■□□□□ 0.75
SCARNA2-201ENST00000458748 EDIL3O43854 480 aa19.76■□□□□ 0.75
SCARNA2-201ENST00000458748 CCNT1O60563 726 aaKnown RBP19.76■□□□□ 0.75
SCARNA2-201ENST00000458748 FDPSP14324 419 aaKnown RBP19.76■□□□□ 0.75
SCARNA2-201ENST00000458748 HMGN5P82970 282 aaKnown RBP19.76■□□□□ 0.75
SCARNA2-201ENST00000458748 MIER3Q7Z3K6 550 aa19.76■□□□□ 0.75
SCARNA2-201ENST00000458748 INSL6Q9Y581 213 aa19.76■□□□□ 0.75
SCARNA2-201ENST00000458748 TBX3O15119 743 aa19.75■□□□□ 0.75
SCARNA2-201ENST00000458748 MAGEB2O15479 319 aa19.75■□□□□ 0.75
SCARNA2-201ENST00000458748 PSMD10O75832 226 aa19.75■□□□□ 0.75
SCARNA2-201ENST00000458748 BAG4O95429 457 aaKnown RBP19.75■□□□□ 0.75
SCARNA2-201ENST00000458748 POU3F3P20264 500 aaPredicted RBP19.75■□□□□ 0.75
SCARNA2-201ENST00000458748 KLRC1P26715 233 aa19.75■□□□□ 0.75
SCARNA2-201ENST00000458748 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.75■□□□□ 0.75
SCARNA2-201ENST00000458748 ZNF710Q8N1W2 664 aa19.75■□□□□ 0.75
SCARNA2-201ENST00000458748 CERS4Q9HA82 394 aa19.75■□□□□ 0.75
SCARNA2-201ENST00000458748 TRPV2Q9Y5S1 764 aa19.75■□□□□ 0.75
SCARNA2-201ENST00000458748 CDY2AQ9Y6F7 541 aa19.75■□□□□ 0.75
SCARNA2-201ENST00000458748 IGSF9BQ9UPX0 1349 aa19.75■□□□□ 0.75
SCARNA2-201ENST00000458748 RFXAPO00287 272 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms