RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 HBP1O60381 514 aa21.99■■□□□ 1.11
USP40-207ENST00000450940 CDKL5O76039 1030 aa21.99■■□□□ 1.11
USP40-207ENST00000450940 ATP4AP20648 1035 aa21.99■■□□□ 1.11
USP40-207ENST00000450940 MRPS6P82932 125 aaKnown RBP21.99■■□□□ 1.11
USP40-207ENST00000450940 KRT76Q01546 638 aa21.99■■□□□ 1.11
USP40-207ENST00000450940 LPIN1Q14693 890 aa21.99■■□□□ 1.11
USP40-207ENST00000450940 ANKRD1Q15327 319 aa21.99■■□□□ 1.11
USP40-207ENST00000450940 FBXO47Q5MNV8 452 aa21.99■■□□□ 1.11
USP40-207ENST00000450940 SWSAP1Q6NVH7 229 aa21.99■■□□□ 1.11
USP40-207ENST00000450940 TRAPPC12Q8WVT3 735 aa21.99■■□□□ 1.11
USP40-207ENST00000450940 ZBTB10Q96DT7 871 aa21.99■■□□□ 1.11
USP40-207ENST00000450940 AIFM3Q96NN9 605 aa21.99■■□□□ 1.11
USP40-207ENST00000450940 SLKQ9H2G2 1235 aaPredicted RBP21.99■■□□□ 1.11
USP40-207ENST00000450940 CERS4Q9HA82 394 aa21.99■■□□□ 1.11
USP40-207ENST00000450940 ZNF302Q9NR11 478 aa21.99■■□□□ 1.11
USP40-207ENST00000450940 CDY2AQ9Y6F7 541 aa21.99■■□□□ 1.11
USP40-207ENST00000450940 STK36Q9NRP7 1315 aa21.99■■□□□ 1.11
USP40-207ENST00000450940 PRRC2BQ5JSZ5 2229 aaKnown RBP21.99■■□□□ 1.11
USP40-207ENST00000450940 EVPLQ92817 2033 aa21.99■■□□□ 1.11
USP40-207ENST00000450940 COL1A2P08123 1366 aa21.99■■□□□ 1.11
USP40-207ENST00000450940 CYP3A7-CYP3A51PA0A087WV96 503 aa21.98■■□□□ 1.11
USP40-207ENST00000450940 LINC01553A4QN01 128 aa21.98■■□□□ 1.11
USP40-207ENST00000450940 RFXAPO00287 272 aa21.98■■□□□ 1.11
USP40-207ENST00000450940 BACH1O14867 736 aa21.98■■□□□ 1.11
USP40-207ENST00000450940 MSH4O15457 936 aa21.98■■□□□ 1.11
USP40-207ENST00000450940 CYP3A7P24462 503 aa21.98■■□□□ 1.11
USP40-207ENST00000450940 ERVK-21P61565 698 aa21.98■■□□□ 1.11
USP40-207ENST00000450940 ZNF484Q5JVG2 852 aa21.98■■□□□ 1.11
USP40-207ENST00000450940 IER5Q5VY09 327 aa21.98■■□□□ 1.11
USP40-207ENST00000450940 PDXDC2PQ6P474 469 aa21.98■■□□□ 1.11
USP40-207ENST00000450940 MTHFD1LQ6UB35 978 aa21.98■■□□□ 1.11
USP40-207ENST00000450940 SPRED2Q7Z698 418 aa21.98■■□□□ 1.11
USP40-207ENST00000450940 MYOCDQ8IZQ8 938 aa21.98■■□□□ 1.11
USP40-207ENST00000450940 NME8Q8N427 588 aa21.98■■□□□ 1.11
USP40-207ENST00000450940 SP7Q8TDD2 431 aaPredicted RBP21.98■■□□□ 1.11
USP40-207ENST00000450940 TBCKQ8TEA7 893 aa21.98■■□□□ 1.11
USP40-207ENST00000450940 ARNTL2Q8WYA1 636 aa21.98■■□□□ 1.11
USP40-207ENST00000450940 UIMC1Q96RL1 719 aa21.98■■□□□ 1.11
USP40-207ENST00000450940 RIT2Q99578 217 aa21.98■■□□□ 1.11
USP40-207ENST00000450940 PCDHA10Q9Y5I2 948 aa21.98■■□□□ 1.11
USP40-207ENST00000450940 MTCH2Q9Y6C9 303 aa21.98■■□□□ 1.11
USP40-207ENST00000450940 COL4A6Q14031 1691 aa21.98■■□□□ 1.11
USP40-207ENST00000450940 ZBTB42B2RXF5 422 aa21.97■■□□□ 1.11
USP40-207ENST00000450940 GHRP10912 638 aa21.97■■□□□ 1.11
USP40-207ENST00000450940 AK2P54819 239 aa21.97■■□□□ 1.11
USP40-207ENST00000450940 Q4G0T1 1027 aa21.97■■□□□ 1.11
USP40-207ENST00000450940 TSHZ1Q6ZSZ6 1077 aa21.97■■□□□ 1.11
USP40-207ENST00000450940 SLC5A5Q92911 643 aa21.97■■□□□ 1.11
USP40-207ENST00000450940 MBOAT7Q96N66 472 aa21.97■■□□□ 1.11
USP40-207ENST00000450940 KDM3AQ9Y4C1 1321 aa21.97■■□□□ 1.11
USP40-207ENST00000450940 TTC3P53804 2025 aa21.96■■□□□ 1.11
USP40-207ENST00000450940 COL4A4P53420 1690 aaPredicted RBP21.96■■□□□ 1.11
USP40-207ENST00000450940 LPXNO60711 386 aa21.96■■□□□ 1.11
USP40-207ENST00000450940 PSAPP07602 524 aa21.96■■□□□ 1.11
USP40-207ENST00000450940 KLRC1P26715 233 aa21.96■■□□□ 1.11
USP40-207ENST00000450940 FAM117BQ6P1L5 589 aa21.96■■□□□ 1.11
USP40-207ENST00000450940 MOXD1Q6UVY6 613 aa21.96■■□□□ 1.11
USP40-207ENST00000450940 BBXQ8WY36 941 aaPredicted RBP21.96■■□□□ 1.11
USP40-207ENST00000450940 TGS1Q96RS0 853 aaKnown RBP21.96■■□□□ 1.11
USP40-207ENST00000450940 PHF20Q9BVI0 1012 aa21.96■■□□□ 1.11
USP40-207ENST00000450940 COL25A1Q9BXS0 654 aaPredicted RBP21.96■■□□□ 1.11
USP40-207ENST00000450940 FAM49AQ9H0Q0 323 aaPredicted RBP21.96■■□□□ 1.11
USP40-207ENST00000450940 CTDNEP1O95476 244 aa21.95■■□□□ 1.1
USP40-207ENST00000450940 PPM1EQ8WY54 764 aa21.95■■□□□ 1.1
USP40-207ENST00000450940 CELF4Q9BZC1 486 aaKnown RBP21.95■■□□□ 1.1
USP40-207ENST00000450940 AGO3Q9H9G7 860 aaKnown RBP21.95■■□□□ 1.1
USP40-207ENST00000450940 PRDM6Q9NQX0 595 aa21.95■■□□□ 1.1
USP40-207ENST00000450940 TRPV2Q9Y5S1 764 aa21.95■■□□□ 1.1
USP40-207ENST00000450940 WDR64B1ANS9 1081 aa21.94■■□□□ 1.1
USP40-207ENST00000450940 ENPP3O14638 875 aa21.94■■□□□ 1.1
USP40-207ENST00000450940 GTPBP6O43824 516 aaPredicted RBP21.94■■□□□ 1.1
USP40-207ENST00000450940 SEC24BO95487 1268 aa21.94■■□□□ 1.1
USP40-207ENST00000450940 GRB10Q13322 594 aa21.94■■□□□ 1.1
USP40-207ENST00000450940 CCDC85BQ15834 202 aaPredicted RBP21.94■■□□□ 1.1
USP40-207ENST00000450940 FAM43BQ6ZT52 329 aaPredicted RBP21.94■■□□□ 1.1
USP40-207ENST00000450940 KRT25Q7Z3Z0 450 aa21.94■■□□□ 1.1
USP40-207ENST00000450940 KIAA0319LQ8IZA0 1049 aa21.94■■□□□ 1.1
USP40-207ENST00000450940 LMCD1Q9NZU5 365 aa21.94■■□□□ 1.1
USP40-207ENST00000450940 TCEAL9Q9UHQ7 104 aa21.94■■□□□ 1.1
USP40-207ENST00000450940 KCNJ14Q9UNX9 436 aa21.94■■□□□ 1.1
USP40-207ENST00000450940 IGSF9BQ9UPX0 1349 aa21.94■■□□□ 1.1
USP40-207ENST00000450940 PSMD10O75832 226 aa21.93■■□□□ 1.1
USP40-207ENST00000450940 SFNP31947 248 aa21.93■■□□□ 1.1
USP40-207ENST00000450940 NONOQ15233 471 aaKnown RBP eCLIP21.93■■□□□ 1.1
USP40-207ENST00000450940 B3GNT9Q6UX72 402 aa21.93■■□□□ 1.1
USP40-207ENST00000450940 ATXN2LQ8WWM7 1075 aaKnown RBP21.93■■□□□ 1.1
USP40-207ENST00000450940 SUGCTQ9HAC7 445 aa21.93■■□□□ 1.1
USP40-207ENST00000450940 DISC1Q9NRI5 854 aa21.93■■□□□ 1.1
USP40-207ENST00000450940 GABBR1Q9UBS5 961 aa21.93■■□□□ 1.1
USP40-207ENST00000450940 NLRC5Q86WI3 1866 aa21.92■■□□□ 1.1
USP40-207ENST00000450940 M0QZ92 97 aa21.92■■□□□ 1.1
USP40-207ENST00000450940 GAS7O60861 476 aa21.92■■□□□ 1.1
USP40-207ENST00000450940 TDP2O95551 362 aa21.92■■□□□ 1.1
USP40-207ENST00000450940 C22orf31O95567 290 aa21.92■■□□□ 1.1
USP40-207ENST00000450940 ME3Q16798 604 aa21.92■■□□□ 1.1
USP40-207ENST00000450940 LRCH2Q5VUJ6 765 aa21.92■■□□□ 1.1
USP40-207ENST00000450940 CKAP2LQ8IYA6 745 aa21.92■■□□□ 1.1
USP40-207ENST00000450940 CRIPAKQ8N1N5 446 aa21.92■■□□□ 1.1
USP40-207ENST00000450940 RDM1Q8NG50 284 aa21.92■■□□□ 1.1
USP40-207ENST00000450940 FAM167AQ96KS9 214 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms