RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 DCP1AQ9NPI6 582 aaPredicted RBP15.19■□□□□ 0.02
VPS52-212ENST00000445902 IL17RBQ9NRM6 502 aa15.19■□□□□ 0.02
VPS52-212ENST00000445902 TMEM260Q9NX78 707 aa15.19■□□□□ 0.02
VPS52-212ENST00000445902 MAD2L2Q9UI95 211 aa15.19■□□□□ 0.02
VPS52-212ENST00000445902 AFF2P51816 1311 aa15.19■□□□□ 0.02
VPS52-212ENST00000445902 COL1A1P02452 1464 aaPredicted RBP15.19■□□□□ 0.02
VPS52-212ENST00000445902 CACNA1SQ13698 1873 aa15.19■□□□□ 0.02
VPS52-212ENST00000445902 RGS16O15492 202 aaPredicted RBP15.19■□□□□ 0.02
VPS52-212ENST00000445902 AP1G2O75843 785 aa15.19■□□□□ 0.02
VPS52-212ENST00000445902 FGRP09769 529 aa15.19■□□□□ 0.02
VPS52-212ENST00000445902 NONOQ15233 471 aaKnown RBP eCLIP15.19■□□□□ 0.02
VPS52-212ENST00000445902 MIS18BP1Q6P0N0 1132 aa15.19■□□□□ 0.02
VPS52-212ENST00000445902 HOOK3Q86VS8 718 aa15.19■□□□□ 0.02
VPS52-212ENST00000445902 TPCN2Q8NHX9 752 aa15.19■□□□□ 0.02
VPS52-212ENST00000445902 TBCKQ8TEA7 893 aa15.19■□□□□ 0.02
VPS52-212ENST00000445902 DYNLL2Q96FJ2 89 aa15.19■□□□□ 0.02
VPS52-212ENST00000445902 ZMYND12Q9H0C1 365 aa15.19■□□□□ 0.02
VPS52-212ENST00000445902 NUCKS1Q9H1E3 243 aaKnown RBP15.19■□□□□ 0.02
VPS52-212ENST00000445902 EPB41L4BQ9H329 900 aa15.19■□□□□ 0.02
VPS52-212ENST00000445902 BATF3Q9NR55 127 aa15.19■□□□□ 0.02
VPS52-212ENST00000445902 BARHL2Q9NY43 387 aa15.19■□□□□ 0.02
VPS52-212ENST00000445902 PNMA3Q9UL41 463 aa15.19■□□□□ 0.02
VPS52-212ENST00000445902 ASAP2O43150 1006 aa15.18■□□□□ 0.02
VPS52-212ENST00000445902 SMNDC1O75940 238 aaKnown RBP eCLIP15.18■□□□□ 0.02
VPS52-212ENST00000445902 GSTA1P08263 222 aa15.18■□□□□ 0.02
VPS52-212ENST00000445902 USP17L8P0C7I0 530 aa15.18■□□□□ 0.02
VPS52-212ENST00000445902 SLC9A1P19634 815 aa15.18■□□□□ 0.02
VPS52-212ENST00000445902 IGHMBP2P38935 993 aaKnown RBP15.18■□□□□ 0.02
VPS52-212ENST00000445902 FKBP3Q00688 224 aaKnown RBP15.18■□□□□ 0.02
VPS52-212ENST00000445902 SLC29A2Q14542 456 aa15.18■□□□□ 0.02
VPS52-212ENST00000445902 ITIH4Q14624 930 aa15.18■□□□□ 0.02
VPS52-212ENST00000445902 SUSD4Q5VX71 490 aa15.18■□□□□ 0.02
VPS52-212ENST00000445902 TRIM68Q6AZZ1 485 aa15.18■□□□□ 0.02
VPS52-212ENST00000445902 ALKBH5Q6P6C2 394 aaKnown RBP15.18■□□□□ 0.02
VPS52-212ENST00000445902 SYN2Q92777 582 aaPredicted RBP15.18■□□□□ 0.02
VPS52-212ENST00000445902 RNF25Q96BH1 459 aaPredicted RBP15.18■□□□□ 0.02
VPS52-212ENST00000445902 ACSBG1Q96GR2 724 aa15.18■□□□□ 0.02
VPS52-212ENST00000445902 CALR3Q96L12 384 aaKnown RBP15.18■□□□□ 0.02
VPS52-212ENST00000445902 STX8Q9UNK0 236 aa15.18■□□□□ 0.02
VPS52-212ENST00000445902 SNX24Q9Y343 169 aa15.18■□□□□ 0.02
VPS52-212ENST00000445902 ADAMTSL3P82987 1691 aa15.18■□□□□ 0.02
VPS52-212ENST00000445902 ABCB11O95342 1321 aa15.18■□□□□ 0.02
VPS52-212ENST00000445902 CCDC188H7C350 402 aa15.18■□□□□ 0.02
VPS52-212ENST00000445902 EVI5O60447 810 aa15.18■□□□□ 0.02
VPS52-212ENST00000445902 ZNF211Q13398 564 aaPredicted RBP15.18■□□□□ 0.02
VPS52-212ENST00000445902 RIPK1Q13546 671 aa15.18■□□□□ 0.02
VPS52-212ENST00000445902 DENND2CQ68D51 928 aa15.18■□□□□ 0.02
VPS52-212ENST00000445902 OTUD6AQ7L8S5 288 aa15.18■□□□□ 0.02
VPS52-212ENST00000445902 NEK8Q86SG6 692 aa15.18■□□□□ 0.02
VPS52-212ENST00000445902 PIGBQ92521 554 aa15.18■□□□□ 0.02
VPS52-212ENST00000445902 KLHL29Q96CT2 875 aa15.18■□□□□ 0.02
VPS52-212ENST00000445902 FAM114A2Q9NRY5 505 aa15.18■□□□□ 0.02
VPS52-212ENST00000445902 NAGPAQ9UK23 515 aa15.18■□□□□ 0.02
VPS52-212ENST00000445902 DBR1Q9UK59 544 aaKnown RBP15.18■□□□□ 0.02
VPS52-212ENST00000445902 TNS2Q63HR2 1409 aa15.18■□□□□ 0.02
VPS52-212ENST00000445902 SMCO2A6NFE2 343 aa15.18■□□□□ 0.02
VPS52-212ENST00000445902 PPFIA2O75334 1257 aa15.18■□□□□ 0.02
VPS52-212ENST00000445902 MMP13P45452 471 aa15.18■□□□□ 0.02
VPS52-212ENST00000445902 PMS2P54278 862 aa15.18■□□□□ 0.02
VPS52-212ENST00000445902 ZNF268Q14587 947 aaPredicted RBP15.18■□□□□ 0.02
VPS52-212ENST00000445902 COBLL1Q53SF7 1204 aa15.18■□□□□ 0.02
VPS52-212ENST00000445902 FGFR1OP2Q9NVK5 253 aa15.18■□□□□ 0.02
VPS52-212ENST00000445902 MCM9Q9NXL9 1143 aa15.18■□□□□ 0.02
VPS52-212ENST00000445902 SLC5A4Q9NY91 659 aa15.18■□□□□ 0.02
VPS52-212ENST00000445902 PAPPAQ13219 1627 aa15.17■□□□□ 0.02
VPS52-212ENST00000445902 CFAP73A6NFT4 308 aa15.17■□□□□ 0.02
VPS52-212ENST00000445902 BHMG1C9JSJ3 638 aaPredicted RBP15.17■□□□□ 0.02
VPS52-212ENST00000445902 ZBTB48P10074 688 aaPredicted RBP15.17■□□□□ 0.02
VPS52-212ENST00000445902 AP1ARQ63HQ0 302 aa15.17■□□□□ 0.02
VPS52-212ENST00000445902 SNX29Q8TEQ0 813 aa15.17■□□□□ 0.02
VPS52-212ENST00000445902 DYDC1Q8WWB3 177 aa15.17■□□□□ 0.02
VPS52-212ENST00000445902 CENPTQ96BT3 561 aa15.17■□□□□ 0.02
VPS52-212ENST00000445902 SLITRK6Q9H5Y7 841 aa15.17■□□□□ 0.02
VPS52-212ENST00000445902 ERVK-5Q9HDB9 667 aa15.17■□□□□ 0.02
VPS52-212ENST00000445902 KCNMB3Q9NPA1 279 aa15.17■□□□□ 0.02
VPS52-212ENST00000445902 OSGEPQ9NPF4 335 aa15.17■□□□□ 0.02
VPS52-212ENST00000445902 C1orf167Q5SNV9 1468 aa15.17■□□□□ 0.02
VPS52-212ENST00000445902 PVALEFA0A1B0GWK0 134 aa15.17■□□□□ 0.02
VPS52-212ENST00000445902 FOXO6A8MYZ6 492 aa15.17■□□□□ 0.02
VPS52-212ENST00000445902 FGFR4P22455 802 aa15.17■□□□□ 0.02
VPS52-212ENST00000445902 COASYQ13057 564 aa15.17■□□□□ 0.02
VPS52-212ENST00000445902 FBXO25Q8TCJ0 367 aa15.17■□□□□ 0.02
VPS52-212ENST00000445902 NEK9Q8TD19 979 aa15.17■□□□□ 0.02
VPS52-212ENST00000445902 GANQ9H2C0 597 aa15.17■□□□□ 0.02
VPS52-212ENST00000445902 ZHX3Q9H4I2 956 aa15.17■□□□□ 0.02
VPS52-212ENST00000445902 AIPL1Q9NZN9 384 aa15.17■□□□□ 0.02
VPS52-212ENST00000445902 TAF1P21675 1872 aa15.17■□□□□ 0.02
VPS52-212ENST00000445902 NPHP3-ACAD11A0A0J9YXS1 232 aa15.16■□□□□ 0.02
VPS52-212ENST00000445902 CES2O00748 559 aa15.16■□□□□ 0.02
VPS52-212ENST00000445902 SLC37A4O43826 429 aa15.16■□□□□ 0.02
VPS52-212ENST00000445902 ABL2P42684 1182 aa15.16■□□□□ 0.02
VPS52-212ENST00000445902 EIF3BP55884 814 aaKnown RBP15.16■□□□□ 0.02
VPS52-212ENST00000445902 IRF2BP2Q7Z5L9 587 aa15.16■□□□□ 0.02
VPS52-212ENST00000445902 CCHCR1Q8TD31 782 aa15.16■□□□□ 0.02
VPS52-212ENST00000445902 SEMA4AQ9H3S1 761 aa15.16■□□□□ 0.02
VPS52-212ENST00000445902 TDP2O95551 362 aa15.16■□□□□ 0.02
VPS52-212ENST00000445902 DR1Q01658 176 aa15.16■□□□□ 0.02
VPS52-212ENST00000445902 MKRN4PQ13434 485 aaPredicted RBP15.16■□□□□ 0.02
VPS52-212ENST00000445902 SNX1Q13596 522 aa15.16■□□□□ 0.02
VPS52-212ENST00000445902 CALCRLQ16602 461 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms