RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 ARHGEF35A5YM69 484 aa20.82■□□□□ 0.92
SEMA3D-202ENST00000444867 RASSF10A6NK89 507 aa20.82■□□□□ 0.92
SEMA3D-202ENST00000444867 DDX39AO00148 427 aaKnown RBP20.82■□□□□ 0.92
SEMA3D-202ENST00000444867 SFNP31947 248 aa20.82■□□□□ 0.92
SEMA3D-202ENST00000444867 IREB2P48200 963 aaKnown RBP20.82■□□□□ 0.92
SEMA3D-202ENST00000444867 CASP5P51878 434 aa20.82■□□□□ 0.92
SEMA3D-202ENST00000444867 KRT76Q01546 638 aa20.82■□□□□ 0.92
SEMA3D-202ENST00000444867 ADAM9Q13443 819 aa20.82■□□□□ 0.92
SEMA3D-202ENST00000444867 MEA1Q16626 185 aa20.82■□□□□ 0.92
SEMA3D-202ENST00000444867 TRIM59Q8IWR1 403 aa20.82■□□□□ 0.92
SEMA3D-202ENST00000444867 BANK1Q8NDB2 785 aa20.82■□□□□ 0.92
SEMA3D-202ENST00000444867 NSUN6Q8TEA1 469 aaKnown RBP20.82■□□□□ 0.92
SEMA3D-202ENST00000444867 DESI2Q9BSY9 194 aa20.82■□□□□ 0.92
SEMA3D-202ENST00000444867 ZNHIT6Q9NWK9 470 aaKnown RBP20.82■□□□□ 0.92
SEMA3D-202ENST00000444867 WRAP73Q9P2S5 460 aaPredicted RBP20.82■□□□□ 0.92
SEMA3D-202ENST00000444867 KIAA1217Q5T5P2 1943 aa20.82■□□□□ 0.92
SEMA3D-202ENST00000444867 STAM2O75886 525 aa20.82■□□□□ 0.92
SEMA3D-202ENST00000444867 MYBP10242 640 aa20.82■□□□□ 0.92
SEMA3D-202ENST00000444867 RPL13P26373 211 aaKnown RBP20.82■□□□□ 0.92
SEMA3D-202ENST00000444867 QARSP47897 775 aaKnown RBP20.82■□□□□ 0.92
SEMA3D-202ENST00000444867 PPP2R3AQ06190 1150 aa20.82■□□□□ 0.92
SEMA3D-202ENST00000444867 PRKG1Q13976 671 aa20.82■□□□□ 0.92
SEMA3D-202ENST00000444867 C9orf131Q5VYM1 1079 aa20.82■□□□□ 0.92
SEMA3D-202ENST00000444867 GCNT3O95395 438 aa20.81■□□□□ 0.92
SEMA3D-202ENST00000444867 NR3C2P08235 984 aa20.81■□□□□ 0.92
SEMA3D-202ENST00000444867 CDK17Q00537 523 aa20.81■□□□□ 0.92
SEMA3D-202ENST00000444867 NFIL3Q16649 462 aa20.81■□□□□ 0.92
SEMA3D-202ENST00000444867 WDR81Q562E7 1941 aa20.81■□□□□ 0.92
SEMA3D-202ENST00000444867 USP50Q70EL3 339 aaPredicted RBP20.81■□□□□ 0.92
SEMA3D-202ENST00000444867 FRMD5Q7Z6J6 570 aa20.81■□□□□ 0.92
SEMA3D-202ENST00000444867 MYCT1Q8N699 235 aa20.81■□□□□ 0.92
SEMA3D-202ENST00000444867 CHST13Q8NET6 341 aa20.81■□□□□ 0.92
SEMA3D-202ENST00000444867 L3MBTL3Q96JM7 780 aaPredicted RBP20.81■□□□□ 0.92
SEMA3D-202ENST00000444867 PKD2L1Q9P0L9 805 aa20.81■□□□□ 0.92
SEMA3D-202ENST00000444867 ADM5C9JUS6 153 aa20.8■□□□□ 0.92
SEMA3D-202ENST00000444867 NKRFO15226 690 aaKnown RBP eCLIP20.8■□□□□ 0.92
SEMA3D-202ENST00000444867 PRPF6O94906 941 aaKnown RBP20.8■□□□□ 0.92
SEMA3D-202ENST00000444867 NR2F2P24468 414 aa20.8■□□□□ 0.92
SEMA3D-202ENST00000444867 HOXD13P35453 343 aa20.8■□□□□ 0.92
SEMA3D-202ENST00000444867 DPY19L2Q6NUT2 758 aa20.8■□□□□ 0.92
SEMA3D-202ENST00000444867 ZC3H15Q8WU90 426 aaKnown RBP20.8■□□□□ 0.92
SEMA3D-202ENST00000444867 CDHR1Q96JP9 859 aa20.8■□□□□ 0.92
SEMA3D-202ENST00000444867 INPP4AQ96PE3 977 aaPredicted RBP20.8■□□□□ 0.92
SEMA3D-202ENST00000444867 SENP7Q9BQF6 1050 aa20.8■□□□□ 0.92
SEMA3D-202ENST00000444867 TIPINQ9BVW5 301 aa20.8■□□□□ 0.92
SEMA3D-202ENST00000444867 L2HGDHQ9H9P8 463 aa20.8■□□□□ 0.92
SEMA3D-202ENST00000444867 CYP39A1Q9NYL5 469 aa20.8■□□□□ 0.92
SEMA3D-202ENST00000444867 DNAI1Q9UI46 699 aa20.8■□□□□ 0.92
SEMA3D-202ENST00000444867 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.8■□□□□ 0.92
SEMA3D-202ENST00000444867 LCTP09848 1927 aa20.8■□□□□ 0.92
SEMA3D-202ENST00000444867 WDR64B1ANS9 1081 aa20.79■□□□□ 0.92
SEMA3D-202ENST00000444867 ZBTB39O15060 712 aa20.79■□□□□ 0.92
SEMA3D-202ENST00000444867 SLC16A3O15427 465 aaKnown RBP20.79■□□□□ 0.92
SEMA3D-202ENST00000444867 NF2P35240 595 aa20.79■□□□□ 0.92
SEMA3D-202ENST00000444867 KLK7P49862 253 aa20.79■□□□□ 0.92
SEMA3D-202ENST00000444867 ZNF746Q6NUN9 644 aaPredicted RBP20.79■□□□□ 0.92
SEMA3D-202ENST00000444867 C4orf19Q8IY42 314 aa20.79■□□□□ 0.92
SEMA3D-202ENST00000444867 SAMM50Q9Y512 469 aa20.79■□□□□ 0.92
SEMA3D-202ENST00000444867 EPN1Q9Y6I3 576 aaPredicted RBP20.79■□□□□ 0.92
SEMA3D-202ENST00000444867 TESPA1A2RU30 521 aaPredicted RBP20.78■□□□□ 0.92
SEMA3D-202ENST00000444867 MAPTP10636 758 aaKnown RBP20.78■□□□□ 0.92
SEMA3D-202ENST00000444867 HNRNPH3P31942 346 aaKnown RBP20.78■□□□□ 0.92
SEMA3D-202ENST00000444867 PPATQ06203 517 aa20.78■□□□□ 0.92
SEMA3D-202ENST00000444867 WDR59Q6PJI9 974 aa20.78■□□□□ 0.92
SEMA3D-202ENST00000444867 PADI6Q6TGC4 694 aa20.78■□□□□ 0.92
SEMA3D-202ENST00000444867 CCDC170Q8IYT3 715 aa20.78■□□□□ 0.92
SEMA3D-202ENST00000444867 PROCA1Q8NCQ7 364 aaPredicted RBP20.78■□□□□ 0.92
SEMA3D-202ENST00000444867 NEK11Q8NG66 645 aa20.78■□□□□ 0.92
SEMA3D-202ENST00000444867 METTL14Q9HCE5 456 aaKnown RBP20.78■□□□□ 0.92
SEMA3D-202ENST00000444867 A1CFQ9NQ94 594 aaKnown RBP20.78■□□□□ 0.92
SEMA3D-202ENST00000444867 AGPAT5Q9NUQ2 364 aa20.78■□□□□ 0.92
SEMA3D-202ENST00000444867 ASTN1O14525 1302 aa20.78■□□□□ 0.92
SEMA3D-202ENST00000444867 NDUFA10O95299 355 aa20.78■□□□□ 0.92
SEMA3D-202ENST00000444867 CYLC1P35663 651 aaPredicted RBP20.78■□□□□ 0.92
SEMA3D-202ENST00000444867 PSMC5P62195 406 aa20.78■□□□□ 0.92
SEMA3D-202ENST00000444867 ALCAMQ13740 583 aa20.78■□□□□ 0.92
SEMA3D-202ENST00000444867 FAM178BQ8IXR5 827 aa20.78■□□□□ 0.92
SEMA3D-202ENST00000444867 IWS1Q96ST2 819 aa20.78■□□□□ 0.92
SEMA3D-202ENST00000444867 CHP1Q99653 195 aa20.78■□□□□ 0.92
SEMA3D-202ENST00000444867 MMRN2Q9H8L6 949 aa20.78■□□□□ 0.92
SEMA3D-202ENST00000444867 FBXO40Q9UH90 709 aa20.78■□□□□ 0.92
SEMA3D-202ENST00000444867 PCDHB13Q9Y5F0 798 aa20.78■□□□□ 0.92
SEMA3D-202ENST00000444867 NFASCO94856 1347 aa20.77■□□□□ 0.92
SEMA3D-202ENST00000444867 DKC1O60832 514 aaKnown RBP eCLIP20.77■□□□□ 0.92
SEMA3D-202ENST00000444867 NR3C1P04150 777 aa20.77■□□□□ 0.92
SEMA3D-202ENST00000444867 GNG11P61952 73 aa20.77■□□□□ 0.92
SEMA3D-202ENST00000444867 PLS1Q14651 629 aa20.77■□□□□ 0.92
SEMA3D-202ENST00000444867 LBX2Q6XYB7 198 aa20.77■□□□□ 0.92
SEMA3D-202ENST00000444867 ZNF720Q7Z2F6 126 aa20.77■□□□□ 0.92
SEMA3D-202ENST00000444867 ERO1BQ86YB8 467 aa20.77■□□□□ 0.92
SEMA3D-202ENST00000444867 ANKRD13AQ8IZ07 590 aa20.77■□□□□ 0.92
SEMA3D-202ENST00000444867 PURBQ96QR8 312 aaKnown RBP20.77■□□□□ 0.92
SEMA3D-202ENST00000444867 FIZ1Q96SL8 496 aa20.77■□□□□ 0.92
SEMA3D-202ENST00000444867 NUCKS1Q9H1E3 243 aaKnown RBP20.77■□□□□ 0.92
SEMA3D-202ENST00000444867 ANKEF1Q9NU02 776 aa20.77■□□□□ 0.92
SEMA3D-202ENST00000444867 ARMCX3Q9UH62 379 aaPredicted RBP20.77■□□□□ 0.92
SEMA3D-202ENST00000444867 SCN4AP35499 1836 aa20.76■□□□□ 0.91
SEMA3D-202ENST00000444867 ZC3H4Q9UPT8 1303 aaKnown RBP20.76■□□□□ 0.91
SEMA3D-202ENST00000444867 A0A0G2JLL6 359 aaPredicted RBP20.76■□□□□ 0.91
SEMA3D-202ENST00000444867 SFI1A8K8P3 1242 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms