RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.4■□□□□ 0.06
SMARCA4-204ENST00000444061 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.4■□□□□ 0.06
SMARCA4-204ENST00000444061 LRRC37A3O60309 1634 aa15.4■□□□□ 0.06
SMARCA4-204ENST00000444061 RFX1P22670 979 aa15.4■□□□□ 0.06
SMARCA4-204ENST00000444061 SPECC1LQ69YQ0 1117 aa15.4■□□□□ 0.06
SMARCA4-204ENST00000444061 TUBGCP2Q9BSJ2 902 aa15.4■□□□□ 0.06
SMARCA4-204ENST00000444061 SEL1LQ9UBV2 794 aa15.4■□□□□ 0.06
SMARCA4-204ENST00000444061 SYNPO2Q9UMS6 1093 aa15.4■□□□□ 0.06
SMARCA4-204ENST00000444061 INPP5FQ9Y2H2 1132 aa15.4■□□□□ 0.06
SMARCA4-204ENST00000444061 COBLO75128 1261 aa15.4■□□□□ 0.06
SMARCA4-204ENST00000444061 EYA4O95677 639 aa15.4■□□□□ 0.06
SMARCA4-204ENST00000444061 HLTFQ14527 1009 aaKnown RBP eCLIP15.4■□□□□ 0.061e-6■□□□□ 10.1
SMARCA4-204ENST00000444061 ZNF568Q3ZCX4 644 aa15.4■□□□□ 0.06
SMARCA4-204ENST00000444061 PLCD3Q8N3E9 789 aa15.4■□□□□ 0.06
SMARCA4-204ENST00000444061 XPO4Q9C0E2 1151 aaKnown RBP15.4■□□□□ 0.06
SMARCA4-204ENST00000444061 RIOX1Q9H6W3 641 aa15.4■□□□□ 0.06
SMARCA4-204ENST00000444061 CTTNBP2NLQ9P2B4 639 aa15.4■□□□□ 0.06
SMARCA4-204ENST00000444061 NFIBO00712 420 aa15.4■□□□□ 0.06
SMARCA4-204ENST00000444061 PVALEFA0A1B0GWK0 134 aa15.39■□□□□ 0.05
SMARCA4-204ENST00000444061 GOLGA8IPA6NC78 632 aa15.39■□□□□ 0.05
SMARCA4-204ENST00000444061 GOLGA8JA6NMD2 632 aa15.39■□□□□ 0.05
SMARCA4-204ENST00000444061 MAGEB2O15479 319 aa15.39■□□□□ 0.05
SMARCA4-204ENST00000444061 OAZ1P54368 228 aa15.39■□□□□ 0.05
SMARCA4-204ENST00000444061 MYO1EQ12965 1108 aa15.39■□□□□ 0.05
SMARCA4-204ENST00000444061 AXDND1Q5T1B0 1012 aaPredicted RBP15.39■□□□□ 0.05
SMARCA4-204ENST00000444061 PPP4R3CPQ6ZMV5 832 aa15.39■□□□□ 0.05
SMARCA4-204ENST00000444061 TMTC1Q8IUR5 882 aa15.39■□□□□ 0.05
SMARCA4-204ENST00000444061 TSGA10Q9BZW7 698 aa15.39■□□□□ 0.05
SMARCA4-204ENST00000444061 ERAP1Q9NZ08 941 aa15.39■□□□□ 0.05
SMARCA4-204ENST00000444061 DGAT1O75907 488 aa15.39■□□□□ 0.05
SMARCA4-204ENST00000444061 ABL1P00519 1130 aa15.39■□□□□ 0.05
SMARCA4-204ENST00000444061 FDPSP14324 419 aaKnown RBP15.39■□□□□ 0.05
SMARCA4-204ENST00000444061 MAGEA1P43355 309 aa15.39■□□□□ 0.05
SMARCA4-204ENST00000444061 PSMC4P43686 418 aa15.39■□□□□ 0.05
SMARCA4-204ENST00000444061 KLRG1Q96E93 195 aa15.39■□□□□ 0.05
SMARCA4-204ENST00000444061 SNX25Q9H3E2 840 aa15.39■□□□□ 0.05
SMARCA4-204ENST00000444061 WDR18Q9BV38 432 aa15.39■□□□□ 0.05
SMARCA4-204ENST00000444061 MOV10L1Q9BXT6 1211 aaKnown RBP15.39■□□□□ 0.05
SMARCA4-204ENST00000444061 MAK16Q9BXY0 300 aaKnown RBP15.39■□□□□ 0.05
SMARCA4-204ENST00000444061 MTIF3Q9H2K0 278 aaKnown RBP15.39■□□□□ 0.05
SMARCA4-204ENST00000444061 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.39■□□□□ 0.05
SMARCA4-204ENST00000444061 DNAI1Q9UI46 699 aa15.39■□□□□ 0.05
SMARCA4-204ENST00000444061 CSPG5O95196 566 aa15.39■□□□□ 0.05
SMARCA4-204ENST00000444061 AFPP02771 609 aaKnown RBP15.39■□□□□ 0.05
SMARCA4-204ENST00000444061 EEF1GP26641 437 aaKnown RBP15.39■□□□□ 0.05
SMARCA4-204ENST00000444061 MXI1P50539 228 aa15.39■□□□□ 0.05
SMARCA4-204ENST00000444061 CDC42EP1Q00587 391 aa15.39■□□□□ 0.05
SMARCA4-204ENST00000444061 CUL4BQ13620 913 aa15.39■□□□□ 0.05
SMARCA4-204ENST00000444061 DPCR1Q3MIW9 517 aa15.39■□□□□ 0.05
SMARCA4-204ENST00000444061 POLR2FP61218 127 aaKnown RBP15.38■□□□□ 0.05
SMARCA4-204ENST00000444061 KIAA0754O94854 1291 aa15.38■□□□□ 0.05
SMARCA4-204ENST00000444061 PPM1FP49593 454 aaPredicted RBP15.38■□□□□ 0.05
SMARCA4-204ENST00000444061 ERVK-9P63128 1117 aa15.38■□□□□ 0.05
SMARCA4-204ENST00000444061 ERVK-24P63145 666 aa15.38■□□□□ 0.05
SMARCA4-204ENST00000444061 LRRC63Q05C16 580 aa15.38■□□□□ 0.05
SMARCA4-204ENST00000444061 CKAP4Q07065 602 aaKnown RBP15.38■□□□□ 0.05
SMARCA4-204ENST00000444061 RNF149Q8NC42 400 aa15.38■□□□□ 0.05
SMARCA4-204ENST00000444061 SOCS4Q8WXH5 440 aa15.38■□□□□ 0.05
SMARCA4-204ENST00000444061 NXF1Q9UBU9 619 aaKnown RBP15.38■□□□□ 0.05
SMARCA4-204ENST00000444061 TRIM17Q9Y577 477 aa15.38■□□□□ 0.05
SMARCA4-204ENST00000444061 GBP2P32456 591 aaPredicted RBP15.38■□□□□ 0.05
SMARCA4-204ENST00000444061 COPB1P53618 953 aaKnown RBP15.38■□□□□ 0.05
SMARCA4-204ENST00000444061 IFRD2Q12894 506 aaPredicted RBP15.38■□□□□ 0.05
SMARCA4-204ENST00000444061 DAGLBQ8NCG7 672 aa15.38■□□□□ 0.05
SMARCA4-204ENST00000444061 MIS12Q9H081 205 aa15.38■□□□□ 0.05
SMARCA4-204ENST00000444061 NHSL1Q5SYE7 1610 aa15.38■□□□□ 0.05
SMARCA4-204ENST00000444061 CTDNEP1O95476 244 aa15.38■□□□□ 0.05
SMARCA4-204ENST00000444061 MFAP3P55082 362 aa15.38■□□□□ 0.05
SMARCA4-204ENST00000444061 BPIFB4P59827 614 aa15.38■□□□□ 0.05
SMARCA4-204ENST00000444061 ARRDC4Q8NCT1 418 aa15.38■□□□□ 0.05
SMARCA4-204ENST00000444061 MICAL1Q8TDZ2 1067 aa15.38■□□□□ 0.05
SMARCA4-204ENST00000444061 LBHD1Q9BQE6 289 aaPredicted RBP15.38■□□□□ 0.05
SMARCA4-204ENST00000444061 KIAA1586Q9HCI6 787 aa15.38■□□□□ 0.05
SMARCA4-204ENST00000444061 SUCLA2Q9P2R7 463 aaPredicted RBP15.38■□□□□ 0.05
SMARCA4-204ENST00000444061 PITPNM2Q9BZ72 1349 aa15.37■□□□□ 0.05
SMARCA4-204ENST00000444061 FZD9O00144 591 aa15.37■□□□□ 0.05
SMARCA4-204ENST00000444061 PDE6CP51160 858 aa15.37■□□□□ 0.05
SMARCA4-204ENST00000444061 PTK2Q05397 1052 aa15.37■□□□□ 0.05
SMARCA4-204ENST00000444061 MAN2A1Q16706 1144 aa15.37■□□□□ 0.05
SMARCA4-204ENST00000444061 OR8K1Q8NGG5 319 aa15.37■□□□□ 0.05
SMARCA4-204ENST00000444061 SYTL5Q8TDW5 730 aaPredicted RBP15.37■□□□□ 0.05
SMARCA4-204ENST00000444061 CLMNQ96JQ2 1002 aa15.37■□□□□ 0.05
SMARCA4-204ENST00000444061 MRPL4Q9BYD3 311 aaKnown RBP15.37■□□□□ 0.05
SMARCA4-204ENST00000444061 DAPK3O43293 454 aa15.37■□□□□ 0.05
SMARCA4-204ENST00000444061 HBP1O60381 514 aa15.37■□□□□ 0.05
SMARCA4-204ENST00000444061 CTSHP09668 335 aa15.37■□□□□ 0.05
SMARCA4-204ENST00000444061 ANKS1AQ92625 1134 aa15.37■□□□□ 0.05
SMARCA4-204ENST00000444061 CCSER1Q9C0I3 900 aa15.37■□□□□ 0.05
SMARCA4-204ENST00000444061 IMPACTQ9P2X3 320 aa15.37■□□□□ 0.05
SMARCA4-204ENST00000444061 MCM3P25205 808 aa15.37■□□□□ 0.05
SMARCA4-204ENST00000444061 EFNA5P52803 228 aa15.37■□□□□ 0.05
SMARCA4-204ENST00000444061 ZNF280AP59817 542 aaPredicted RBP15.37■□□□□ 0.05
SMARCA4-204ENST00000444061 DSTYKQ6XUX3 929 aa15.37■□□□□ 0.05
SMARCA4-204ENST00000444061 FBXO16Q8IX29 292 aaPredicted RBP15.37■□□□□ 0.05
SMARCA4-204ENST00000444061 JAKMIP2Q96AA8 810 aa15.37■□□□□ 0.05
SMARCA4-204ENST00000444061 RWDD2AQ9UIY3 292 aa15.37■□□□□ 0.05
SMARCA4-204ENST00000444061 TRPM3Q9HCF6 1732 aaPredicted RBP15.37■□□□□ 0.05
SMARCA4-204ENST00000444061 LTBP3Q9NS15 1303 aa15.37■□□□□ 0.05
SMARCA4-204ENST00000444061 CAPN9O14815 690 aa15.36■□□□□ 0.05
SMARCA4-204ENST00000444061 PRKCEQ02156 737 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms