RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 CFAP45Q9UL16 551 aa5.4□□□□□ -1.54
HMGB3P9-201ENST00000441799 TPCN1Q9ULQ1 816 aa5.4□□□□□ -1.54
HMGB3P9-201ENST00000441799 RRP15Q9Y3B9 282 aaKnown RBP5.4□□□□□ -1.54
HMGB3P9-201ENST00000441799 EID1Q9Y6B2 187 aa5.4□□□□□ -1.54
HMGB3P9-201ENST00000441799 SPATA31D1Q6ZQQ2 1576 aa5.4□□□□□ -1.55
HMGB3P9-201ENST00000441799 KANK1Q14678 1352 aa5.4□□□□□ -1.55
HMGB3P9-201ENST00000441799 DHX29Q7Z478 1369 aaKnown RBP5.4□□□□□ -1.55
HMGB3P9-201ENST00000441799 AKNAQ7Z591 1439 aa5.4□□□□□ -1.55
HMGB3P9-201ENST00000441799 FGD5Q6ZNL6 1462 aa5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 SHROOM2Q13796 1616 aa5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 H0Y3Z8 333 aa5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 CPLX1O14810 134 aa5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 FIBPO43427 364 aa5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 MYO1BO43795 1136 aa5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 HTR3BO95264 441 aa5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 MYL3P08590 195 aa5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 MYCLP1P12525 358 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 PNLIPP16233 465 aa5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 BTF3P20290 206 aaKnown RBP5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 KIR2DL1P43626 348 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 KIR2DL2P43627 348 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 ST13P50502 369 aaKnown RBP5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 PAPOLAP51003 745 aaKnown RBP5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 GPSM2P81274 684 aa5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 ICA1Q05084 483 aa5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 SLMAPQ14BN4 828 aa5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 POSTNQ15063 836 aa5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 TOMM20Q15388 145 aa5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 PTPN14Q15678 1187 aa5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 SLC14A2Q15849 920 aa5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 TBC1D25Q3MII6 688 aa5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 SPECC1Q5M775 1068 aa5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 HYIQ5T013 277 aa5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 C10orf62Q5T681 223 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 CCDC30Q5VVM6 783 aa5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 LMBRD2Q68DH5 695 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 TTC19Q6DKK2 380 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 TTLL5Q6EMB2 1281 aa5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 CCDC80Q76M96 950 aa5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 HDGFL2Q7Z4V5 671 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 PRRT2Q7Z6L0 340 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 IFNL3Q8IZI9 196 aa5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 ZDHHC14Q8IZN3 488 aa5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 SYT8Q8NBV8 401 aa5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 DAGLBQ8NCG7 672 aa5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 NELL1Q92832 810 aa5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 TSR2Q969E8 191 aaKnown RBP5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 BICD1Q96G01 975 aa5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 TCTN2Q96GX1 697 aa5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 NAF1Q96HR8 494 aaKnown RBP5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 DHTKD1Q96HY7 919 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 SRRTQ9BXP5 876 aaKnown RBP5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 OSBPL5Q9H0X9 879 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 OSBPL2Q9H1P3 480 aa5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 ZNHIT6Q9NWK9 470 aaKnown RBP5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 ZMYM5Q9UJ78 669 aa5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 MRPS23Q9Y3D9 190 aaKnown RBP5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 LRRFIP2Q9Y608 721 aaKnown RBP5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 PRDM2Q13029 1718 aa5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 TMEM94Q12767 1356 aa5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 USP31Q70CQ4 1352 aa5.39□□□□□ -1.55
HMGB3P9-201ENST00000441799 FOXN3O00409 490 aaPredicted RBP5.38□□□□□ -1.55
HMGB3P9-201ENST00000441799 SCAMP3O14828 347 aaKnown RBP5.38□□□□□ -1.55
HMGB3P9-201ENST00000441799 GRIN3BO60391 1043 aa5.38□□□□□ -1.55
HMGB3P9-201ENST00000441799 CLASP2O75122 1294 aaKnown RBP5.38□□□□□ -1.55
HMGB3P9-201ENST00000441799 UBOX5O94941 541 aa5.38□□□□□ -1.55
HMGB3P9-201ENST00000441799 KRT18P05783 430 aaKnown RBP5.38□□□□□ -1.55
HMGB3P9-201ENST00000441799 NCAM1P13591 858 aa5.38□□□□□ -1.55
HMGB3P9-201ENST00000441799 GYS1P13807 737 aa5.38□□□□□ -1.55
HMGB3P9-201ENST00000441799 KCNA6P17658 529 aa5.38□□□□□ -1.55
HMGB3P9-201ENST00000441799 GEMIN4P57678 1058 aaKnown RBP5.38□□□□□ -1.55
HMGB3P9-201ENST00000441799 SNX16P57768 344 aa5.38□□□□□ -1.55
HMGB3P9-201ENST00000441799 NUCB2P80303 420 aa5.38□□□□□ -1.55
HMGB3P9-201ENST00000441799 TAGLNQ01995 201 aaKnown RBP5.38□□□□□ -1.55
HMGB3P9-201ENST00000441799 CNGA3Q16281 694 aa5.38□□□□□ -1.55
HMGB3P9-201ENST00000441799 WDR45BQ5MNZ6 344 aa5.38□□□□□ -1.55
HMGB3P9-201ENST00000441799 CCDC122Q5T0U0 273 aa5.38□□□□□ -1.55
HMGB3P9-201ENST00000441799 SFMBT2Q5VUG0 894 aa5.38□□□□□ -1.55
HMGB3P9-201ENST00000441799 C9orf131Q5VYM1 1079 aa5.38□□□□□ -1.55
HMGB3P9-201ENST00000441799 IRGCQ6NXR0 463 aa5.38□□□□□ -1.55
HMGB3P9-201ENST00000441799 CEP128Q6ZU80 1094 aa5.38□□□□□ -1.55
HMGB3P9-201ENST00000441799 MCM10Q7L590 875 aa5.38□□□□□ -1.55
HMGB3P9-201ENST00000441799 TMC3Q7Z5M5 1100 aa5.38□□□□□ -1.55
HMGB3P9-201ENST00000441799 SNX32Q86XE0 403 aa5.38□□□□□ -1.55
HMGB3P9-201ENST00000441799 FAM129CQ86XR2 697 aa5.38□□□□□ -1.55
HMGB3P9-201ENST00000441799 IGDCC3Q8IVU1 814 aa5.38□□□□□ -1.55
HMGB3P9-201ENST00000441799 TP53I13Q8NBR0 393 aaPredicted RBP5.38□□□□□ -1.55
HMGB3P9-201ENST00000441799 LINC00116Q8NCU8 138 aa5.38□□□□□ -1.55
HMGB3P9-201ENST00000441799 MZB1Q8WU39 189 aa5.38□□□□□ -1.55
HMGB3P9-201ENST00000441799 PGBD4Q96DM1 585 aa5.38□□□□□ -1.55
HMGB3P9-201ENST00000441799 RHOVQ96L33 236 aa5.38□□□□□ -1.55
HMGB3P9-201ENST00000441799 GMLQ99445 158 aa5.38□□□□□ -1.55
HMGB3P9-201ENST00000441799 SH3GL3Q99963 347 aa5.38□□□□□ -1.55
HMGB3P9-201ENST00000441799 BACH2Q9BYV9 841 aa5.38□□□□□ -1.55
HMGB3P9-201ENST00000441799 SLC7A5P2Q9GIP4 190 aa5.38□□□□□ -1.55
HMGB3P9-201ENST00000441799 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.38□□□□□ -1.55
HMGB3P9-201ENST00000441799 TCF7L2Q9NQB0 619 aa5.38□□□□□ -1.55
HMGB3P9-201ENST00000441799 TBC1D7Q9P0N9 293 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms