RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 TTLL6Q8N841 843 aa4.13□□□□□ -1.75
HMGB1P9-201ENST00000429856 LINC00482Q8N8I6 264 aa4.13□□□□□ -1.75
HMGB1P9-201ENST00000429856 KYQ8NBH2 561 aa4.13□□□□□ -1.75
HMGB1P9-201ENST00000429856 SCLYQ96I15 445 aa4.13□□□□□ -1.75
HMGB1P9-201ENST00000429856 WRNIP1Q96S55 665 aa4.13□□□□□ -1.75
HMGB1P9-201ENST00000429856 FEZ1Q99689 392 aa4.13□□□□□ -1.75
HMGB1P9-201ENST00000429856 INTS7Q9NVH2 962 aaKnown RBP4.13□□□□□ -1.75
HMGB1P9-201ENST00000429856 SRPK3Q9UPE1 567 aa4.13□□□□□ -1.75
HMGB1P9-201ENST00000429856 NPEPPSL1A6NEC2 478 aa4.12□□□□□ -1.75
HMGB1P9-201ENST00000429856 ZNF561-AS1K7EIQ3 104 aa4.12□□□□□ -1.75
HMGB1P9-201ENST00000429856 PPP1R12AO14974 1030 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P9-201ENST00000429856 OPA1O60313 960 aa4.12□□□□□ -1.75
HMGB1P9-201ENST00000429856 CYP7B1O75881 506 aa4.12□□□□□ -1.75
HMGB1P9-201ENST00000429856 LRG1P02750 347 aa4.12□□□□□ -1.75
HMGB1P9-201ENST00000429856 CKMP06732 381 aa4.12□□□□□ -1.75
HMGB1P9-201ENST00000429856 FAHP16930 419 aa4.12□□□□□ -1.75
HMGB1P9-201ENST00000429856 POU3F3P20264 500 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P9-201ENST00000429856 STAT5AP42229 794 aa4.12□□□□□ -1.75
HMGB1P9-201ENST00000429856 MASP1P48740 699 aa4.12□□□□□ -1.75
HMGB1P9-201ENST00000429856 PABPC4Q13310 644 aaKnown RBP eCLIP4.12□□□□□ -1.75
HMGB1P9-201ENST00000429856 CR1LQ2VPA4 569 aa4.12□□□□□ -1.75
HMGB1P9-201ENST00000429856 PAN2Q504Q3 1202 aaKnown RBP4.12□□□□□ -1.75
HMGB1P9-201ENST00000429856 FGD2Q7Z6J4 655 aa4.12□□□□□ -1.75
HMGB1P9-201ENST00000429856 CLUHP3Q96NS8 147 aa4.12□□□□□ -1.75
HMGB1P9-201ENST00000429856 TMEM209Q96SK2 561 aa4.12□□□□□ -1.75
HMGB1P9-201ENST00000429856 GORASP1Q9BQQ3 440 aa4.12□□□□□ -1.75
HMGB1P9-201ENST00000429856 WDR26Q9H7D7 661 aa4.12□□□□□ -1.75
HMGB1P9-201ENST00000429856 SLC52A1Q9NWF4 448 aa4.12□□□□□ -1.75
HMGB1P9-201ENST00000429856 DDX56Q9NY93 547 aaKnown RBP4.12□□□□□ -1.75
HMGB1P9-201ENST00000429856 C11orf21Q9P2W6 132 aa4.12□□□□□ -1.75
HMGB1P9-201ENST00000429856 MAGEC2Q9UBF1 373 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P9-201ENST00000429856 CBLCQ9ULV8 474 aa4.12□□□□□ -1.75
HMGB1P9-201ENST00000429856 PLAAQ9Y263 795 aa4.12□□□□□ -1.75
HMGB1P9-201ENST00000429856 CD2APQ9Y5K6 639 aa4.12□□□□□ -1.75
HMGB1P9-201ENST00000429856 ATP23Q9Y6H3 246 aa4.12□□□□□ -1.75
HMGB1P9-201ENST00000429856 TCRBV5S4A2TA0A5A2 114 aa4.11□□□□□ -1.75
HMGB1P9-201ENST00000429856 LAMTOR5O43504 91 aa4.11□□□□□ -1.75
HMGB1P9-201ENST00000429856 CLASP2O75122 1294 aaKnown RBP4.11□□□□□ -1.75
HMGB1P9-201ENST00000429856 DNAJC8O75937 253 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P9-201ENST00000429856 CLSTN1O94985 981 aa4.11□□□□□ -1.75
HMGB1P9-201ENST00000429856 AMY2AP04746 511 aa4.11□□□□□ -1.75
HMGB1P9-201ENST00000429856 KRT15P19012 456 aa4.11□□□□□ -1.75
HMGB1P9-201ENST00000429856 AMY2BP19961 511 aa4.11□□□□□ -1.75
HMGB1P9-201ENST00000429856 IBSPP21815 317 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P9-201ENST00000429856 ITGA1P56199 1179 aa4.11□□□□□ -1.75
HMGB1P9-201ENST00000429856 EVA1CP58658 441 aa4.11□□□□□ -1.75
HMGB1P9-201ENST00000429856 KLF10Q13118 480 aa4.11□□□□□ -1.75
HMGB1P9-201ENST00000429856 DALRD3Q5D0E6 543 aaKnown RBP4.11□□□□□ -1.75
HMGB1P9-201ENST00000429856 MCTP2Q6DN12 878 aa4.11□□□□□ -1.75
HMGB1P9-201ENST00000429856 VASNQ6EMK4 673 aa4.11□□□□□ -1.75
HMGB1P9-201ENST00000429856 ZCCHC8Q6NZY4 707 aaKnown RBP4.11□□□□□ -1.75
HMGB1P9-201ENST00000429856 UBE2R2Q712K3 238 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P9-201ENST00000429856 PLEKHH3Q7Z736 793 aa4.11□□□□□ -1.75
HMGB1P9-201ENST00000429856 FAM26EQ8N5C1 309 aa4.11□□□□□ -1.75
HMGB1P9-201ENST00000429856 CISD2Q8N5K1 135 aaKnown RBP4.11□□□□□ -1.75
HMGB1P9-201ENST00000429856 IGSF22Q8N9C0 903 aa4.11□□□□□ -1.75
HMGB1P9-201ENST00000429856 ZCRB1Q8TBF4 217 aaKnown RBP4.11□□□□□ -1.75
HMGB1P9-201ENST00000429856 SH3RF2Q8TEC5 729 aa4.11□□□□□ -1.75
HMGB1P9-201ENST00000429856 CLEC4DQ8WXI8 215 aa4.11□□□□□ -1.75
HMGB1P9-201ENST00000429856 NINJ1Q92982 152 aa4.11□□□□□ -1.75
HMGB1P9-201ENST00000429856 LCORQ96JN0 433 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P9-201ENST00000429856 CLIC6Q96NY7 704 aa4.11□□□□□ -1.75
HMGB1P9-201ENST00000429856 C11orf84Q9BUA3 381 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P9-201ENST00000429856 CD244Q9BZW8 370 aa4.11□□□□□ -1.75
HMGB1P9-201ENST00000429856 SEMA4AQ9H3S1 761 aa4.11□□□□□ -1.75
HMGB1P9-201ENST00000429856 G3BP2Q9UN86 482 aaKnown RBP4.11□□□□□ -1.75
HMGB1P9-201ENST00000429856 COQ6Q9Y2Z9 468 aa4.11□□□□□ -1.75
HMGB1P9-201ENST00000429856 PRKAB1Q9Y478 270 aa4.11□□□□□ -1.75
HMGB1P9-201ENST00000429856 SLC12A8A0AV02 714 aa4.1□□□□□ -1.75
HMGB1P9-201ENST00000429856 MAN2B1O00754 1011 aa4.1□□□□□ -1.75
HMGB1P9-201ENST00000429856 LTFP02788 710 aa4.1□□□□□ -1.75
HMGB1P9-201ENST00000429856 KCNA6P17658 529 aa4.1□□□□□ -1.75
HMGB1P9-201ENST00000429856 PTPN1P18031 435 aaKnown RBP4.1□□□□□ -1.75
HMGB1P9-201ENST00000429856 THBS2P35442 1172 aa4.1□□□□□ -1.75
HMGB1P9-201ENST00000429856 CDKN1CP49918 316 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P9-201ENST00000429856 JAM2P57087 298 aa4.1□□□□□ -1.75
HMGB1P9-201ENST00000429856 PURAQ00577 322 aaKnown RBP4.1□□□□□ -1.75
HMGB1P9-201ENST00000429856 GRIN1Q05586 938 aa4.1□□□□□ -1.75
HMGB1P9-201ENST00000429856 ICAM4Q14773 271 aa4.1□□□□□ -1.75
HMGB1P9-201ENST00000429856 SMN1Q16637 294 aaKnown RBP4.1□□□□□ -1.75
HMGB1P9-201ENST00000429856 ARHGAP44Q17R89 818 aa4.1□□□□□ -1.75
HMGB1P9-201ENST00000429856 TMEM177Q53S58 311 aa4.1□□□□□ -1.75
HMGB1P9-201ENST00000429856 BTBD8Q5XKL5 378 aa4.1□□□□□ -1.75
HMGB1P9-201ENST00000429856 OVCH1Q7RTY7 1134 aa4.1□□□□□ -1.75
HMGB1P9-201ENST00000429856 OSTM1Q86WC4 334 aa4.1□□□□□ -1.75
HMGB1P9-201ENST00000429856 PTRH1Q86Y79 214 aaKnown RBP4.1□□□□□ -1.75
HMGB1P9-201ENST00000429856 RAVER1Q8IY67 606 aaKnown RBP4.1□□□□□ -1.75
HMGB1P9-201ENST00000429856 C2orf69Q8N8R5 385 aa4.1□□□□□ -1.75
HMGB1P9-201ENST00000429856 SMURF1Q9HCE7 757 aa4.1□□□□□ -1.75
HMGB1P9-201ENST00000429856 CABP5Q9NP86 173 aa4.1□□□□□ -1.75
HMGB1P9-201ENST00000429856 DLL4Q9NR61 685 aa4.1□□□□□ -1.75
HMGB1P9-201ENST00000429856 RIC8BQ9NVN3 520 aa4.1□□□□□ -1.75
HMGB1P9-201ENST00000429856 SAMD15Q9P1V8 674 aa4.1□□□□□ -1.75
HMGB1P9-201ENST00000429856 TELO2Q9Y4R8 837 aa4.1□□□□□ -1.75
HMGB1P9-201ENST00000429856 TNPO3Q9Y5L0 923 aaKnown RBP4.1□□□□□ -1.75
HMGB1P9-201ENST00000429856 HIP1RO75146 1068 aa4.09□□□□□ -1.75
HMGB1P9-201ENST00000429856 ENO2P09104 434 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P9-201ENST00000429856 VIL1P09327 827 aaKnown RBP4.09□□□□□ -1.75
HMGB1P9-201ENST00000429856 HERVK_113P62684 666 aa4.09□□□□□ -1.75
HMGB1P9-201ENST00000429856 ABHD17CQ6PCB6 329 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms