RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 RRAGDQ9NQL2 400 aaPredicted RBP24.49■■□□□ 1.51
VSX1-205ENST00000429762 ZKSCAN5Q9Y2L8 839 aa24.49■■□□□ 1.51
VSX1-205ENST00000429762 LOXHD1Q8IVV2 1947 aa24.49■■□□□ 1.51
VSX1-205ENST00000429762 IGF2BP3O00425 579 aaKnown RBP eCLIP24.49■■□□□ 1.51
VSX1-205ENST00000429762 BACH1O14867 736 aa24.49■■□□□ 1.51
VSX1-205ENST00000429762 FAM13AO94988 1023 aa24.49■■□□□ 1.51
VSX1-205ENST00000429762 PPP1R2P41236 205 aa24.49■■□□□ 1.51
VSX1-205ENST00000429762 CCNA1P78396 465 aa24.49■■□□□ 1.51
VSX1-205ENST00000429762 SWSAP1Q6NVH7 229 aa24.49■■□□□ 1.51
VSX1-205ENST00000429762 SAPCD2Q86UD0 394 aa24.49■■□□□ 1.51
VSX1-205ENST00000429762 FBXO16Q8IX29 292 aaPredicted RBP24.49■■□□□ 1.51
VSX1-205ENST00000429762 SCFD1Q8WVM8 642 aa24.49■■□□□ 1.51
VSX1-205ENST00000429762 VPS16Q9H269 839 aa24.49■■□□□ 1.51
VSX1-205ENST00000429762 A0A1B0GTH6 734 aa24.48■■□□□ 1.51
VSX1-205ENST00000429762 GCLCP48506 637 aaPredicted RBP24.48■■□□□ 1.51
VSX1-205ENST00000429762 RARRES1P49788 294 aa24.48■■□□□ 1.51
VSX1-205ENST00000429762 NPEPPSP55786 919 aa24.48■■□□□ 1.51
VSX1-205ENST00000429762 VSTM4Q8IW00 320 aa24.48■■□□□ 1.51
VSX1-205ENST00000429762 CCDC60Q8IWA6 550 aaPredicted RBP24.48■■□□□ 1.51
VSX1-205ENST00000429762 MORF4L1Q9UBU8 362 aa24.48■■□□□ 1.51
VSX1-205ENST00000429762 LIMA1Q9UHB6 759 aaKnown RBP24.48■■□□□ 1.51
VSX1-205ENST00000429762 USO1O60763 962 aaKnown RBP24.47■■□□□ 1.51
VSX1-205ENST00000429762 ARIH2O95376 493 aa24.47■■□□□ 1.51
VSX1-205ENST00000429762 LY6KQ17RY6 165 aa24.47■■□□□ 1.51
VSX1-205ENST00000429762 MYCT1Q8N699 235 aa24.47■■□□□ 1.51
VSX1-205ENST00000429762 THAP9Q9H5L6 903 aa24.47■■□□□ 1.51
VSX1-205ENST00000429762 CPA4Q9UI42 421 aa24.47■■□□□ 1.51
VSX1-205ENST00000429762 PASKQ96RG2 1323 aa24.47■■□□□ 1.51
VSX1-205ENST00000429762 ZNF862O60290 1169 aa24.47■■□□□ 1.51
VSX1-205ENST00000429762 LYPLA2O95372 231 aa24.47■■□□□ 1.51
VSX1-205ENST00000429762 PSAPP07602 524 aa24.47■■□□□ 1.51
VSX1-205ENST00000429762 ADORA2AP29274 412 aa24.47■■□□□ 1.51
VSX1-205ENST00000429762 NR1I3Q14994 352 aa24.47■■□□□ 1.51
VSX1-205ENST00000429762 RGMBQ6NW40 437 aa24.47■■□□□ 1.51
VSX1-205ENST00000429762 C4orf19Q8IY42 314 aa24.47■■□□□ 1.51
VSX1-205ENST00000429762 SMAP1Q8IYB5 467 aaPredicted RBP24.47■■□□□ 1.51
VSX1-205ENST00000429762 RDM1Q8NG50 284 aa24.47■■□□□ 1.51
VSX1-205ENST00000429762 CACTINQ8WUQ7 758 aaKnown RBP24.47■■□□□ 1.51
VSX1-205ENST00000429762 MRPL44Q9H9J2 332 aaKnown RBP24.47■■□□□ 1.51
VSX1-205ENST00000429762 COL4A3BPQ9Y5P4 624 aa24.47■■□□□ 1.51
VSX1-205ENST00000429762 PLXNA1Q9UIW2 1896 aa24.46■■□□□ 1.51
VSX1-205ENST00000429762 NKRFO15226 690 aaKnown RBP eCLIP24.46■■□□□ 1.51
VSX1-205ENST00000429762 HIP1RO75146 1068 aa24.46■■□□□ 1.51
VSX1-205ENST00000429762 PRPF6O94906 941 aaKnown RBP24.46■■□□□ 1.51
VSX1-205ENST00000429762 COPB1P53618 953 aaKnown RBP24.46■■□□□ 1.51
VSX1-205ENST00000429762 GOLGA8FQ08AF8 430 aa24.46■■□□□ 1.51
VSX1-205ENST00000429762 GOLGA8DPQ0D2H9 430 aa24.46■■□□□ 1.51
VSX1-205ENST00000429762 ABHD15Q6UXT9 468 aa24.46■■□□□ 1.51
VSX1-205ENST00000429762 CCDC43Q96MW1 224 aaKnown RBP24.46■■□□□ 1.51
VSX1-205ENST00000429762 DBR1Q9UK59 544 aaKnown RBP24.46■■□□□ 1.51
VSX1-205ENST00000429762 NMT1P30419 496 aaKnown RBP24.45■■□□□ 1.51
VSX1-205ENST00000429762 XKR9Q5GH70 373 aa24.45■■□□□ 1.51
VSX1-205ENST00000429762 GPBP1L1Q9HC44 474 aaPredicted RBP24.45■■□□□ 1.51
VSX1-205ENST00000429762 MYH11P35749 1972 aa24.45■■□□□ 1.5
VSX1-205ENST00000429762 SUPT20HL2P0C7V6 817 aa24.45■■□□□ 1.5
VSX1-205ENST00000429762 MAPK7Q13164 816 aa24.45■■□□□ 1.5
VSX1-205ENST00000429762 TMEM63BQ5T3F8 832 aa24.45■■□□□ 1.5
VSX1-205ENST00000429762 ANO5Q75V66 913 aa24.45■■□□□ 1.5
VSX1-205ENST00000429762 DAW1Q8N136 415 aa24.45■■□□□ 1.5
VSX1-205ENST00000429762 CNOT6LQ96LI5 555 aaKnown RBP24.45■■□□□ 1.5
VSX1-205ENST00000429762 MAGEC2Q9UBF1 373 aaPredicted RBP24.45■■□□□ 1.5
VSX1-205ENST00000429762 PYCARDQ9ULZ3 195 aa24.45■■□□□ 1.5
VSX1-205ENST00000429762 GCNT3O95395 438 aa24.44■■□□□ 1.5
VSX1-205ENST00000429762 TPM3P06753 285 aa24.44■■□□□ 1.5
VSX1-205ENST00000429762 SPAG1Q07617 926 aa24.44■■□□□ 1.5
VSX1-205ENST00000429762 MIS18BP1Q6P0N0 1132 aa24.44■■□□□ 1.5
VSX1-205ENST00000429762 KSR1Q8IVT5 923 aa24.44■■□□□ 1.5
VSX1-205ENST00000429762 NOC3LQ8WTT2 800 aaKnown RBP24.44■■□□□ 1.5
VSX1-205ENST00000429762 PARVGQ9HBI0 331 aa24.44■■□□□ 1.5
VSX1-205ENST00000429762 RTN4Q9NQC3 1192 aaKnown RBP24.44■■□□□ 1.5
VSX1-205ENST00000429762 SYNGAP1Q96PV0 1343 aa24.44■■□□□ 1.5
VSX1-205ENST00000429762 B4DLN1 442 aa24.43■■□□□ 1.5
VSX1-205ENST00000429762 FARP2O94887 1054 aaPredicted RBP24.43■■□□□ 1.5
VSX1-205ENST00000429762 STBD1O95210 358 aa24.43■■□□□ 1.5
VSX1-205ENST00000429762 GGPS1O95749 300 aa24.43■■□□□ 1.5
VSX1-205ENST00000429762 GAP43P17677 238 aa24.43■■□□□ 1.5
VSX1-205ENST00000429762 GUCY2CP25092 1073 aa24.43■■□□□ 1.5
VSX1-205ENST00000429762 MSNP26038 577 aaKnown RBP24.43■■□□□ 1.5
VSX1-205ENST00000429762 HOXD13P35453 343 aa24.43■■□□□ 1.5
VSX1-205ENST00000429762 ZCWPW2Q504Y3 356 aa24.43■■□□□ 1.5
VSX1-205ENST00000429762 EPM2AIP1Q7L775 607 aaPredicted RBP24.43■■□□□ 1.5
VSX1-205ENST00000429762 GPR142Q7Z601 462 aa24.43■■□□□ 1.5
VSX1-205ENST00000429762 C17orf53Q8N3J3 647 aaPredicted RBP24.43■■□□□ 1.5
VSX1-205ENST00000429762 MPHOSPH6Q99547 160 aaKnown RBP24.43■■□□□ 1.5
VSX1-205ENST00000429762 TSG101Q99816 390 aa24.43■■□□□ 1.5
VSX1-205ENST00000429762 IKZF4Q9H2S9 585 aa24.43■■□□□ 1.5
VSX1-205ENST00000429762 PDGFCQ9NRA1 345 aa24.43■■□□□ 1.5
VSX1-205ENST00000429762 N4BP3O15049 544 aa24.43■■□□□ 1.5
VSX1-205ENST00000429762 PRKCEQ02156 737 aa24.43■■□□□ 1.5
VSX1-205ENST00000429762 KCNA1Q09470 495 aa24.43■■□□□ 1.5
VSX1-205ENST00000429762 ZNF792Q3KQV3 632 aa24.43■■□□□ 1.5
VSX1-205ENST00000429762 FILIP1LQ4L180 1135 aa24.43■■□□□ 1.5
VSX1-205ENST00000429762 ZC2HC1CQ53FD0 456 aaPredicted RBP24.43■■□□□ 1.5
VSX1-205ENST00000429762 ARMCX5Q6P1M9 558 aa24.43■■□□□ 1.5
VSX1-205ENST00000429762 ANKRD20A12PQ8NF67 263 aa24.43■■□□□ 1.5
VSX1-205ENST00000429762 CTAGE1Q96RT6 745 aa24.43■■□□□ 1.5
VSX1-205ENST00000429762 KCTD10Q9H3F6 313 aa24.43■■□□□ 1.5
VSX1-205ENST00000429762 GPRC5CQ9NQ84 441 aa24.43■■□□□ 1.5
VSX1-205ENST00000429762 IVNS1ABPQ9Y6Y0 642 aa24.43■■□□□ 1.5
VSX1-205ENST00000429762 ARID2Q68CP9 1835 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms