RNA–Protein interactions for RNA: ENST00000422760.1

LSM8-203, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 1,920 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-203ENST00000422760 BHMT2Q9H2M3 363 aa25.45■■□□□ 1.67
LSM8-203ENST00000422760 TBC1D7Q9P0N9 293 aa25.45■■□□□ 1.67
LSM8-203ENST00000422760 AFG3L2Q9Y4W6 797 aa25.45■■□□□ 1.67
LSM8-203ENST00000422760 RIPK3Q9Y572 518 aa25.45■■□□□ 1.67
LSM8-203ENST00000422760 PES1O00541 588 aaKnown RBP25.45■■□□□ 1.66
LSM8-203ENST00000422760 MAP2K7O14733 419 aa25.45■■□□□ 1.66
LSM8-203ENST00000422760 HERC4Q5GLZ8 1057 aaPredicted RBP25.45■■□□□ 1.66
LSM8-203ENST00000422760 B3GNT9Q6UX72 402 aa25.45■■□□□ 1.66
LSM8-203ENST00000422760 HDXQ7Z353 690 aa25.45■■□□□ 1.66
LSM8-203ENST00000422760 DYDC2Q96IM9 177 aa25.45■■□□□ 1.66
LSM8-203ENST00000422760 CHP1Q99653 195 aa25.45■■□□□ 1.66
LSM8-203ENST00000422760 REEP2Q9BRK0 252 aa25.45■■□□□ 1.66
LSM8-203ENST00000422760 NOC4LQ9BVI4 516 aaKnown RBP25.45■■□□□ 1.66
LSM8-203ENST00000422760 UNC45AQ9H3U1 944 aa25.45■■□□□ 1.66
LSM8-203ENST00000422760 RNF146Q9NTX7 359 aa25.45■■□□□ 1.66
LSM8-203ENST00000422760 EIF3JO75822 258 aaKnown RBP25.44■■□□□ 1.66
LSM8-203ENST00000422760 SLITRK3O94933 977 aa25.44■■□□□ 1.66
LSM8-203ENST00000422760 EYA4O95677 639 aa25.44■■□□□ 1.66
LSM8-203ENST00000422760 DSG3P32926 999 aa25.44■■□□□ 1.66
LSM8-203ENST00000422760 GIT2Q14161 759 aa25.44■■□□□ 1.66
LSM8-203ENST00000422760 WDR59Q6PJI9 974 aa25.44■■□□□ 1.66
LSM8-203ENST00000422760 RNF207Q6ZRF8 634 aa25.44■■□□□ 1.66
LSM8-203ENST00000422760 NIPA1Q7RTP0 329 aa25.44■■□□□ 1.66
LSM8-203ENST00000422760 RIT2Q99578 217 aa25.44■■□□□ 1.66
LSM8-203ENST00000422760 ANKZF1Q9H8Y5 726 aa25.44■■□□□ 1.66
LSM8-203ENST00000422760 KCNH7Q9NS40 1196 aa25.44■■□□□ 1.66
LSM8-203ENST00000422760 TMOD4Q9NZQ9 345 aa25.44■■□□□ 1.66
LSM8-203ENST00000422760 REXO2Q9Y3B8 237 aaKnown RBP25.44■■□□□ 1.66
LSM8-203ENST00000422760 B4DLN1 442 aa25.43■■□□□ 1.66
LSM8-203ENST00000422760 ADM5C9JUS6 153 aa25.43■■□□□ 1.66
LSM8-203ENST00000422760 MRPS9P82933 396 aaKnown RBP25.43■■□□□ 1.66
LSM8-203ENST00000422760 VGLL4Q14135 290 aa25.43■■□□□ 1.66
LSM8-203ENST00000422760 PAPD7Q5XG87 772 aaKnown RBP25.43■■□□□ 1.66
LSM8-203ENST00000422760 NSMFQ6X4W1 530 aa25.43■■□□□ 1.66
LSM8-203ENST00000422760 TRAPPC11Q7Z392 1133 aa25.43■■□□□ 1.66
LSM8-203ENST00000422760 TPH2Q8IWU9 490 aa25.43■■□□□ 1.66
LSM8-203ENST00000422760 DCPSQ96C86 337 aaKnown RBP25.43■■□□□ 1.66
LSM8-203ENST00000422760 TAAR1Q96RJ0 339 aa25.43■■□□□ 1.66
LSM8-203ENST00000422760 ZHX3Q9H4I2 956 aa25.43■■□□□ 1.66
LSM8-203ENST00000422760 ADAMTS5Q9UNA0 930 aa25.43■■□□□ 1.66
LSM8-203ENST00000422760 SNCAIPQ9Y6H5 919 aa25.43■■□□□ 1.66
LSM8-203ENST00000422760 EIF2AK2P19525 551 aaKnown RBP25.43■■□□□ 1.66
LSM8-203ENST00000422760 OAZ1P54368 228 aa25.43■■□□□ 1.66
LSM8-203ENST00000422760 SMC1AQ14683 1233 aaKnown RBP25.43■■□□□ 1.66
LSM8-203ENST00000422760 SNRNP48Q6IEG0 339 aaKnown RBP25.43■■□□□ 1.66
LSM8-203ENST00000422760 WDR93Q6P2C0 686 aa25.43■■□□□ 1.66
LSM8-203ENST00000422760 LRRC55Q6ZSA7 311 aa25.43■■□□□ 1.66
LSM8-203ENST00000422760 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.43■■□□□ 1.66
LSM8-203ENST00000422760 SULF1Q8IWU6 871 aa25.43■■□□□ 1.66
LSM8-203ENST00000422760 TSG101Q99816 390 aa25.43■■□□□ 1.66
LSM8-203ENST00000422760 ZNF214Q9UL59 606 aaPredicted RBP25.43■■□□□ 1.66
LSM8-203ENST00000422760 UBIAD1Q9Y5Z9 338 aa25.43■■□□□ 1.66
LSM8-203ENST00000422760 LOXHD1Q8IVV2 1947 aa25.43■■□□□ 1.66
LSM8-203ENST00000422760 COG2Q14746 738 aa25.42■■□□□ 1.66
LSM8-203ENST00000422760 PGM5Q15124 567 aa25.42■■□□□ 1.66
LSM8-203ENST00000422760 TKFCQ3LXA3 575 aa25.42■■□□□ 1.66
LSM8-203ENST00000422760 ZCWPW2Q504Y3 356 aa25.42■■□□□ 1.66
LSM8-203ENST00000422760 C9orf131Q5VYM1 1079 aa25.42■■□□□ 1.66
LSM8-203ENST00000422760 KIAA1328Q86T90 577 aa25.42■■□□□ 1.66
LSM8-203ENST00000422760 RUSC1Q9BVN2 902 aa25.42■■□□□ 1.66
LSM8-203ENST00000422760 PKD2L1Q9P0L9 805 aa25.42■■□□□ 1.66
LSM8-203ENST00000422760 PUF60Q9UHX1 559 aaKnown RBP25.42■■□□□ 1.66
LSM8-203ENST00000422760 SEC31AO94979 1220 aaKnown RBP25.41■■□□□ 1.66
LSM8-203ENST00000422760 CCDC122Q5T0U0 273 aa25.41■■□□□ 1.66
LSM8-203ENST00000422760 IQCEQ6IPM2 695 aa25.41■■□□□ 1.66
LSM8-203ENST00000422760 CATSPERGQ6ZRH7 1159 aa25.41■■□□□ 1.66
LSM8-203ENST00000422760 PIGOQ8TEQ8 1089 aa25.41■■□□□ 1.66
LSM8-203ENST00000422760 ACBD3Q9H3P7 528 aa25.41■■□□□ 1.66
LSM8-203ENST00000422760 NKRFO15226 690 aaKnown RBP eCLIP25.41■■□□□ 1.66
LSM8-203ENST00000422760 MAN2A1Q16706 1144 aa25.41■■□□□ 1.66
LSM8-203ENST00000422760 MIIPQ5JXC2 388 aa25.41■■□□□ 1.66
LSM8-203ENST00000422760 SCFD1Q8WVM8 642 aa25.41■■□□□ 1.66
LSM8-203ENST00000422760 RMDN3Q96TC7 470 aa25.41■■□□□ 1.66
LSM8-203ENST00000422760 PXMP2Q9NR77 195 aa25.41■■□□□ 1.66
LSM8-203ENST00000422760 LOC285556D6RIA3 1793 aa25.41■■□□□ 1.66
LSM8-203ENST00000422760 A0A0U1RQJ8 604 aa25.4■■□□□ 1.66
LSM8-203ENST00000422760 DDX39AO00148 427 aaKnown RBP25.4■■□□□ 1.66
LSM8-203ENST00000422760 MUTP22033 750 aa25.4■■□□□ 1.66
LSM8-203ENST00000422760 MTMR1Q13613 665 aa25.4■■□□□ 1.66
LSM8-203ENST00000422760 EPHA7Q15375 998 aa25.4■■□□□ 1.66
LSM8-203ENST00000422760 BEND6Q5SZJ8 279 aaPredicted RBP25.4■■□□□ 1.66
LSM8-203ENST00000422760 ATRIPQ8WXE1 791 aa25.4■■□□□ 1.66
LSM8-203ENST00000422760 JAKMIP2Q96AA8 810 aa25.4■■□□□ 1.66
LSM8-203ENST00000422760 PURBQ96QR8 312 aaKnown RBP25.4■■□□□ 1.66
LSM8-203ENST00000422760 PDCD2LQ9BRP1 358 aa25.4■■□□□ 1.66
LSM8-203ENST00000422760 AGO4Q9HCK5 861 aaKnown RBP25.4■■□□□ 1.66
LSM8-203ENST00000422760 JADE2Q9NQC1 790 aa25.4■■□□□ 1.66
LSM8-203ENST00000422760 WRAP73Q9P2S5 460 aaPredicted RBP25.4■■□□□ 1.66
LSM8-203ENST00000422760 GUCA1BQ9UMX6 200 aa25.4■■□□□ 1.66
LSM8-203ENST00000422760 SAR1BQ9Y6B6 198 aa25.4■■□□□ 1.66
LSM8-203ENST00000422760 SASH3O75995 380 aa25.39■■□□□ 1.66
LSM8-203ENST00000422760 CYP2C19P33261 490 aa25.39■■□□□ 1.66
LSM8-203ENST00000422760 HERVK_113P62684 666 aa25.39■■□□□ 1.66
LSM8-203ENST00000422760 TMEM132BQ14DG7 1078 aa25.39■■□□□ 1.66
LSM8-203ENST00000422760 VWA3BQ502W6 1294 aa25.39■■□□□ 1.66
LSM8-203ENST00000422760 SH3D19Q5HYK7 790 aa25.39■■□□□ 1.66
LSM8-203ENST00000422760 SFR1Q86XK3 245 aa25.39■■□□□ 1.66
LSM8-203ENST00000422760 NHEJ1Q9H9Q4 299 aaPredicted RBP25.39■■□□□ 1.66
LSM8-203ENST00000422760 PLAGL2Q9UPG8 496 aa25.39■■□□□ 1.66
LSM8-203ENST00000422760 TARSL2A2RTX5 802 aaKnown RBP25.39■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms