RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 CAPNS1P04632 268 aa6.43□□□□□ -1.38
PTP4A1P1-201ENST00000420539 TP53P04637 393 aaPredicted RBP6.43□□□□□ -1.38
PTP4A1P1-201ENST00000420539 ITGAVP06756 1048 aa6.43□□□□□ -1.38
PTP4A1P1-201ENST00000420539 RAC2P15153 192 aa6.43□□□□□ -1.38
PTP4A1P1-201ENST00000420539 SMARCA1P28370 1054 aa6.43□□□□□ -1.38
PTP4A1P1-201ENST00000420539 ADMP35318 185 aa6.43□□□□□ -1.38
PTP4A1P1-201ENST00000420539 MMP14P50281 582 aa6.43□□□□□ -1.38
PTP4A1P1-201ENST00000420539 ZNF143P52747 638 aaPredicted RBP6.43□□□□□ -1.38
PTP4A1P1-201ENST00000420539 SNX16P57768 344 aa6.43□□□□□ -1.38
PTP4A1P1-201ENST00000420539 SEMA5AQ13591 1074 aa6.43□□□□□ -1.38
PTP4A1P1-201ENST00000420539 RGL3Q3MIN7 710 aa6.43□□□□□ -1.38
PTP4A1P1-201ENST00000420539 HIBCHQ6NVY1 386 aaPredicted RBP6.43□□□□□ -1.38
PTP4A1P1-201ENST00000420539 SEZ6L2Q6UXD5 910 aa6.43□□□□□ -1.38
PTP4A1P1-201ENST00000420539 PDZD4Q76G19 769 aaPredicted RBP6.43□□□□□ -1.38
PTP4A1P1-201ENST00000420539 UBE2Q1Q7Z7E8 422 aa6.43□□□□□ -1.38
PTP4A1P1-201ENST00000420539 PTRH1Q86Y79 214 aaKnown RBP6.43□□□□□ -1.38
PTP4A1P1-201ENST00000420539 KIF18BQ86Y91 864 aa6.43□□□□□ -1.38
PTP4A1P1-201ENST00000420539 SHISA5Q8N114 240 aa6.43□□□□□ -1.38
PTP4A1P1-201ENST00000420539 OR2C3Q8N628 320 aa6.43□□□□□ -1.38
PTP4A1P1-201ENST00000420539 OTUD6BQ8N6M0 293 aa6.43□□□□□ -1.38
PTP4A1P1-201ENST00000420539 APPL2Q8NEU8 664 aa6.43□□□□□ -1.38
PTP4A1P1-201ENST00000420539 FLCNQ8NFG4 579 aa6.43□□□□□ -1.38
PTP4A1P1-201ENST00000420539 MFSD14AQ96MC6 490 aa6.43□□□□□ -1.38
PTP4A1P1-201ENST00000420539 DUSP23Q9BVJ7 150 aa6.43□□□□□ -1.38
PTP4A1P1-201ENST00000420539 APOL5Q9BWW9 433 aa6.43□□□□□ -1.38
PTP4A1P1-201ENST00000420539 XPO4Q9C0E2 1151 aaKnown RBP6.43□□□□□ -1.38
PTP4A1P1-201ENST00000420539 CHMP4BQ9H444 224 aaKnown RBP6.43□□□□□ -1.38
PTP4A1P1-201ENST00000420539 EMC7Q9NPA0 242 aa6.43□□□□□ -1.38
PTP4A1P1-201ENST00000420539 C14orf119Q9NWQ9 140 aa6.43□□□□□ -1.38
PTP4A1P1-201ENST00000420539 RTEL1Q9NZ71 1219 aa6.43□□□□□ -1.38
PTP4A1P1-201ENST00000420539 GPRC5BQ9NZH0 403 aa6.43□□□□□ -1.38
PTP4A1P1-201ENST00000420539 PPARGC1AQ9UBK2 798 aaKnown RBP6.43□□□□□ -1.38
PTP4A1P1-201ENST00000420539 ZNF214Q9UL59 606 aaPredicted RBP6.43□□□□□ -1.38
PTP4A1P1-201ENST00000420539 B4E1Z4 1266 aa6.42□□□□□ -1.38
PTP4A1P1-201ENST00000420539 ULK1O75385 1050 aa6.42□□□□□ -1.38
PTP4A1P1-201ENST00000420539 TBC1D8O95759 1140 aa6.42□□□□□ -1.38
PTP4A1P1-201ENST00000420539 ABCB4P21439 1286 aa6.42□□□□□ -1.38
PTP4A1P1-201ENST00000420539 AKAP5P24588 427 aa6.42□□□□□ -1.38
PTP4A1P1-201ENST00000420539 ZNF131P52739 623 aa6.42□□□□□ -1.38
PTP4A1P1-201ENST00000420539 DSG1Q02413 1049 aa6.42□□□□□ -1.38
PTP4A1P1-201ENST00000420539 CACNB2Q08289 660 aaPredicted RBP6.42□□□□□ -1.38
PTP4A1P1-201ENST00000420539 KIAA0753Q2KHM9 967 aa6.42□□□□□ -1.38
PTP4A1P1-201ENST00000420539 GLIPR1L2Q4G1C9 344 aa6.42□□□□□ -1.38
PTP4A1P1-201ENST00000420539 CCDC38Q502W7 563 aa6.42□□□□□ -1.38
PTP4A1P1-201ENST00000420539 DGKKQ5KSL6 1271 aa6.42□□□□□ -1.38
PTP4A1P1-201ENST00000420539 ZCCHC8Q6NZY4 707 aaKnown RBP6.42□□□□□ -1.38
PTP4A1P1-201ENST00000420539 PRR23CQ6ZRP0 262 aa6.42□□□□□ -1.38
PTP4A1P1-201ENST00000420539 CCDC129Q6ZRS4 1044 aa6.42□□□□□ -1.38
PTP4A1P1-201ENST00000420539 OVCH2Q7RTZ1 564 aa6.42□□□□□ -1.38
PTP4A1P1-201ENST00000420539 C11orf74Q86VG3 221 aa6.42□□□□□ -1.38
PTP4A1P1-201ENST00000420539 ZNF227Q86WZ6 799 aa6.42□□□□□ -1.38
PTP4A1P1-201ENST00000420539 TMEM192Q8IY95 271 aa6.42□□□□□ -1.38
PTP4A1P1-201ENST00000420539 ARL10Q8N8L6 244 aa6.42□□□□□ -1.38
PTP4A1P1-201ENST00000420539 DIO2Q92813 273 aa6.42□□□□□ -1.38
PTP4A1P1-201ENST00000420539 USP13Q92995 863 aaPredicted RBP6.42□□□□□ -1.38
PTP4A1P1-201ENST00000420539 TBC1D31Q96DN5 1066 aa6.42□□□□□ -1.38
PTP4A1P1-201ENST00000420539 MAGEB10Q96LZ2 347 aaPredicted RBP6.42□□□□□ -1.38
PTP4A1P1-201ENST00000420539 PSMG3-AS1Q96PY0 264 aa6.42□□□□□ -1.38
PTP4A1P1-201ENST00000420539 LGR4Q9BXB1 951 aa6.42□□□□□ -1.38
PTP4A1P1-201ENST00000420539 IFT80Q9P2H3 777 aaPredicted RBP6.42□□□□□ -1.38
PTP4A1P1-201ENST00000420539 SUSD2Q9UGT4 822 aa6.42□□□□□ -1.38
PTP4A1P1-201ENST00000420539 ANKRD34BA5PLL1 514 aa6.41□□□□□ -1.38
PTP4A1P1-201ENST00000420539 TSPY2A6NKD2 308 aa6.41□□□□□ -1.38
PTP4A1P1-201ENST00000420539 FAM170BA6NMN3 283 aa6.41□□□□□ -1.38
PTP4A1P1-201ENST00000420539 GOLGA6L6A8MZA4 724 aa6.41□□□□□ -1.38
PTP4A1P1-201ENST00000420539 DDX58O95786 925 aaKnown RBP6.41□□□□□ -1.38
PTP4A1P1-201ENST00000420539 TSPY3P0CV98 308 aa6.41□□□□□ -1.38
PTP4A1P1-201ENST00000420539 TSPY8P0CW00 308 aa6.41□□□□□ -1.38
PTP4A1P1-201ENST00000420539 NAT2P11245 290 aa6.41□□□□□ -1.38
PTP4A1P1-201ENST00000420539 XPAP23025 273 aaPredicted RBP6.41□□□□□ -1.38
PTP4A1P1-201ENST00000420539 ELF1P32519 619 aa6.41□□□□□ -1.38
PTP4A1P1-201ENST00000420539 CTNNA1P35221 906 aaKnown RBP6.41□□□□□ -1.38
PTP4A1P1-201ENST00000420539 LSSP48449 732 aa6.41□□□□□ -1.38
PTP4A1P1-201ENST00000420539 TSPY1Q01534 308 aa6.41□□□□□ -1.38
PTP4A1P1-201ENST00000420539 PLCB4Q15147 1175 aa6.41□□□□□ -1.38
PTP4A1P1-201ENST00000420539 CCNG2Q16589 344 aa6.41□□□□□ -1.38
PTP4A1P1-201ENST00000420539 IQCEQ6IPM2 695 aa6.41□□□□□ -1.38
PTP4A1P1-201ENST00000420539 GPAT2Q6NUI2 795 aa6.41□□□□□ -1.38
PTP4A1P1-201ENST00000420539 LCA5Q86VQ0 697 aa6.41□□□□□ -1.38
PTP4A1P1-201ENST00000420539 CLRN3Q8NCR9 226 aa6.41□□□□□ -1.38
PTP4A1P1-201ENST00000420539 LRRN4CLQ8ND94 238 aa6.41□□□□□ -1.38
PTP4A1P1-201ENST00000420539 DNAJB8Q8NHS0 232 aa6.41□□□□□ -1.38
PTP4A1P1-201ENST00000420539 GIMAP7Q8NHV1 300 aa6.41□□□□□ -1.38
PTP4A1P1-201ENST00000420539 PPP1R13LQ8WUF5 828 aa6.41□□□□□ -1.38
PTP4A1P1-201ENST00000420539 KIAA1191Q96A73 305 aa6.41□□□□□ -1.38
PTP4A1P1-201ENST00000420539 SH3KBP1Q96B97 665 aa6.41□□□□□ -1.38
PTP4A1P1-201ENST00000420539 CHCHD6Q9BRQ6 235 aa6.41□□□□□ -1.38
PTP4A1P1-201ENST00000420539 MKRN2Q9H000 416 aaKnown RBP6.41□□□□□ -1.38
PTP4A1P1-201ENST00000420539 LMAN2LQ9H0V9 348 aa6.41□□□□□ -1.38
PTP4A1P1-201ENST00000420539 VPS45Q9NRW7 570 aa6.41□□□□□ -1.38
PTP4A1P1-201ENST00000420539 INVSQ9Y283 1065 aa6.41□□□□□ -1.38
PTP4A1P1-201ENST00000420539 TMEM98Q9Y2Y6 226 aa6.41□□□□□ -1.38
PTP4A1P1-201ENST00000420539 A0A087WV62 115 aa6.4□□□□□ -1.38
PTP4A1P1-201ENST00000420539 BLACEA4D250 179 aa6.4□□□□□ -1.38
PTP4A1P1-201ENST00000420539 KLHL33A6NCF5 533 aa6.4□□□□□ -1.38
PTP4A1P1-201ENST00000420539 B4E171 279 aa6.4□□□□□ -1.38
PTP4A1P1-201ENST00000420539 CBX4O00257 560 aa6.4□□□□□ -1.38
PTP4A1P1-201ENST00000420539 SOD2P04179 222 aa6.4□□□□□ -1.38
PTP4A1P1-201ENST00000420539 GYS1P13807 737 aa6.4□□□□□ -1.38
PTP4A1P1-201ENST00000420539 IDEP14735 1019 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms