RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 RSAD2Q8WXG1 361 aa18.4■□□□□ 0.54
SYNGAP1-202ENST00000418600 BCL9O00512 1426 aa18.4■□□□□ 0.54
SYNGAP1-202ENST00000418600 STXBP3O00186 592 aa18.4■□□□□ 0.54
SYNGAP1-202ENST00000418600 ALDH3A1P30838 453 aa18.4■□□□□ 0.54
SYNGAP1-202ENST00000418600 MXRA7P84157 204 aa18.4■□□□□ 0.54
SYNGAP1-202ENST00000418600 TADA2BQ86TJ2 420 aa18.4■□□□□ 0.54
SYNGAP1-202ENST00000418600 TBC1D10CQ8IV04 446 aa18.4■□□□□ 0.54
SYNGAP1-202ENST00000418600 FAM186BQ8IYM0 893 aa18.4■□□□□ 0.54
SYNGAP1-202ENST00000418600 FAM20AQ96MK3 541 aa18.4■□□□□ 0.54
SYNGAP1-202ENST00000418600 XPNPEP3Q9NQH7 507 aa18.4■□□□□ 0.54
SYNGAP1-202ENST00000418600 FBXL21Q9UKT6 434 aa18.4■□□□□ 0.54
SYNGAP1-202ENST00000418600 GSPT1P15170 499 aaKnown RBP18.4■□□□□ 0.54
SYNGAP1-202ENST00000418600 ZSCAN23Q3MJ62 389 aa18.4■□□□□ 0.54
SYNGAP1-202ENST00000418600 C16orf86Q6ZW13 317 aa18.4■□□□□ 0.54
SYNGAP1-202ENST00000418600 TMEM199Q8N511 208 aa18.4■□□□□ 0.54
SYNGAP1-202ENST00000418600 ZNF560Q96MR9 790 aa18.4■□□□□ 0.54
SYNGAP1-202ENST00000418600 ERAP1Q9NZ08 941 aa18.4■□□□□ 0.54
SYNGAP1-202ENST00000418600 RRP9O43818 475 aaKnown RBP18.4■□□□□ 0.54
SYNGAP1-202ENST00000418600 MMP1P03956 469 aa18.4■□□□□ 0.54
SYNGAP1-202ENST00000418600 NLRP12P59046 1061 aa18.4■□□□□ 0.54
SYNGAP1-202ENST00000418600 TEX2Q8IWB9 1127 aa18.4■□□□□ 0.54
SYNGAP1-202ENST00000418600 CTAGE15A4D2H0 777 aa18.4■□□□□ 0.54
SYNGAP1-202ENST00000418600 CTAGE8P0CG41 777 aa18.4■□□□□ 0.54
SYNGAP1-202ENST00000418600 RALAP11233 206 aa18.4■□□□□ 0.54
SYNGAP1-202ENST00000418600 OR1G1P47890 313 aa18.4■□□□□ 0.54
SYNGAP1-202ENST00000418600 SARNPP82979 210 aaKnown RBP18.4■□□□□ 0.54
SYNGAP1-202ENST00000418600 PPIL2Q13356 520 aa18.4■□□□□ 0.54
SYNGAP1-202ENST00000418600 OR6B2Q6IFH4 312 aa18.4■□□□□ 0.54
SYNGAP1-202ENST00000418600 CTAGE6Q86UF2 777 aa18.4■□□□□ 0.54
SYNGAP1-202ENST00000418600 SPATA2LQ8IUW3 424 aaPredicted RBP18.4■□□□□ 0.54
SYNGAP1-202ENST00000418600 CTAGE4Q8IX94 777 aa18.4■□□□□ 0.54
SYNGAP1-202ENST00000418600 F8W8V4 182 aa18.39■□□□□ 0.53
SYNGAP1-202ENST00000418600 MSCO60682 206 aa18.39■□□□□ 0.53
SYNGAP1-202ENST00000418600 UBN1Q9NPG3 1134 aa18.39■□□□□ 0.53
SYNGAP1-202ENST00000418600 STRIP2Q9ULQ0 834 aa18.39■□□□□ 0.53
SYNGAP1-202ENST00000418600 CLIC2O15247 247 aa18.39■□□□□ 0.53
SYNGAP1-202ENST00000418600 PAN2Q504Q3 1202 aaKnown RBP18.39■□□□□ 0.53
SYNGAP1-202ENST00000418600 DDX53Q86TM3 631 aaKnown RBP18.39■□□□□ 0.53
SYNGAP1-202ENST00000418600 SYCE1Q8N0S2 351 aa18.39■□□□□ 0.53
SYNGAP1-202ENST00000418600 NKRFO15226 690 aaKnown RBP eCLIP18.39■□□□□ 0.53
SYNGAP1-202ENST00000418600 MAP7D3Q8IWC1 876 aa18.39■□□□□ 0.53
SYNGAP1-202ENST00000418600 CCDC68Q9H2F9 335 aa18.39■□□□□ 0.53
SYNGAP1-202ENST00000418600 DEPDC5O75140 1603 aa18.39■□□□□ 0.53
SYNGAP1-202ENST00000418600 GOLGA8IPA6NC78 632 aa18.39■□□□□ 0.53
SYNGAP1-202ENST00000418600 GOLGA8JA6NMD2 632 aa18.39■□□□□ 0.53
SYNGAP1-202ENST00000418600 GPR182O15218 404 aa18.39■□□□□ 0.53
SYNGAP1-202ENST00000418600 OPA1O60313 960 aa18.39■□□□□ 0.53
SYNGAP1-202ENST00000418600 NR3C2P08235 984 aa18.39■□□□□ 0.53
SYNGAP1-202ENST00000418600 CYP27A1Q02318 531 aa18.39■□□□□ 0.53
SYNGAP1-202ENST00000418600 CYP4F22Q6NT55 531 aa18.39■□□□□ 0.53
SYNGAP1-202ENST00000418600 GDAP1Q8TB36 358 aa18.39■□□□□ 0.53
SYNGAP1-202ENST00000418600 DDX50Q9BQ39 737 aaKnown RBP18.39■□□□□ 0.53
SYNGAP1-202ENST00000418600 RIC8AQ9NPQ8 531 aa18.39■□□□□ 0.53
SYNGAP1-202ENST00000418600 CCDC122Q5T0U0 273 aa18.38■□□□□ 0.53
SYNGAP1-202ENST00000418600 ZC3H15Q8WU90 426 aaKnown RBP18.38■□□□□ 0.53
SYNGAP1-202ENST00000418600 IQCDQ96DY2 449 aa18.38■□□□□ 0.53
SYNGAP1-202ENST00000418600 TMEM169Q96HH4 297 aa18.38■□□□□ 0.53
SYNGAP1-202ENST00000418600 ACAP3Q96P50 834 aa18.38■□□□□ 0.53
SYNGAP1-202ENST00000418600 LSM7Q9UK45 103 aaKnown RBP18.38■□□□□ 0.53
SYNGAP1-202ENST00000418600 GPR75-ASB3A0A0A6YYF3 556 aa18.38■□□□□ 0.53
SYNGAP1-202ENST00000418600 RPLP2P05387 115 aaKnown RBP18.38■□□□□ 0.53
SYNGAP1-202ENST00000418600 DPP7Q9UHL4 492 aa18.38■□□□□ 0.53
SYNGAP1-202ENST00000418600 PRR12Q9ULL5 1215 aa18.38■□□□□ 0.53
SYNGAP1-202ENST00000418600 HPCAL4Q9UM19 191 aa18.38■□□□□ 0.53
SYNGAP1-202ENST00000418600 AFG3L2Q9Y4W6 797 aa18.38■□□□□ 0.53
SYNGAP1-202ENST00000418600 CTCFP49711 727 aaPredicted RBP18.38■□□□□ 0.53
SYNGAP1-202ENST00000418600 GPIHBP1Q8IV16 184 aa18.38■□□□□ 0.53
SYNGAP1-202ENST00000418600 MAIP1Q8WWC4 291 aa18.38■□□□□ 0.53
SYNGAP1-202ENST00000418600 KIF12Q96FN5 646 aa18.38■□□□□ 0.53
SYNGAP1-202ENST00000418600 TTC1Q99614 292 aa18.38■□□□□ 0.53
SYNGAP1-202ENST00000418600 FAM207AQ9NSI2 230 aaPredicted RBP18.38■□□□□ 0.53
SYNGAP1-202ENST00000418600 FAM50BQ9Y247 325 aa18.38■□□□□ 0.53
SYNGAP1-202ENST00000418600 NR2F2P24468 414 aa18.38■□□□□ 0.53
SYNGAP1-202ENST00000418600 PFKFB3Q16875 520 aaPredicted RBP18.38■□□□□ 0.53
SYNGAP1-202ENST00000418600 N4BP2L2Q92802 583 aaPredicted RBP18.38■□□□□ 0.53
SYNGAP1-202ENST00000418600 BHMT2Q9H2M3 363 aa18.38■□□□□ 0.53
SYNGAP1-202ENST00000418600 PFDN4Q9NQP4 134 aa18.38■□□□□ 0.53
SYNGAP1-202ENST00000418600 SLC4A7Q9Y6M7 1214 aa18.38■□□□□ 0.53
SYNGAP1-202ENST00000418600 ZWINTO95229 277 aa18.38■□□□□ 0.53
SYNGAP1-202ENST00000418600 TBC1D8O95759 1140 aa18.38■□□□□ 0.53
SYNGAP1-202ENST00000418600 CBX1P83916 185 aa18.38■□□□□ 0.53
SYNGAP1-202ENST00000418600 CYP26C1Q6V0L0 522 aa18.38■□□□□ 0.53
SYNGAP1-202ENST00000418600 USP32Q8NFA0 1604 aa18.37■□□□□ 0.53
SYNGAP1-202ENST00000418600 CTAGE9A4FU28 777 aa18.37■□□□□ 0.53
SYNGAP1-202ENST00000418600 SLC4A1P02730 911 aa18.37■□□□□ 0.53
SYNGAP1-202ENST00000418600 PGK2P07205 417 aa18.37■□□□□ 0.53
SYNGAP1-202ENST00000418600 AKR1A1P14550 325 aa18.37■□□□□ 0.53
SYNGAP1-202ENST00000418600 GLYCTKQ8IVS8 523 aa18.37■□□□□ 0.53
SYNGAP1-202ENST00000418600 ENAHQ8N8S7 591 aaPredicted RBP18.37■□□□□ 0.53
SYNGAP1-202ENST00000418600 COLEC11Q9BWP8 271 aa18.37■□□□□ 0.53
SYNGAP1-202ENST00000418600 KIAA1586Q9HCI6 787 aa18.37■□□□□ 0.53
SYNGAP1-202ENST00000418600 TMEM260Q9NX78 707 aa18.37■□□□□ 0.53
SYNGAP1-202ENST00000418600 GRIK1P39086 918 aa18.37■□□□□ 0.53
SYNGAP1-202ENST00000418600 SNX17Q15036 470 aa18.37■□□□□ 0.53
SYNGAP1-202ENST00000418600 CFAP157Q5JU67 520 aa18.37■□□□□ 0.53
SYNGAP1-202ENST00000418600 TTBK2Q6IQ55 1244 aa18.37■□□□□ 0.53
SYNGAP1-202ENST00000418600 ATG9AQ7Z3C6 839 aa18.37■□□□□ 0.53
SYNGAP1-202ENST00000418600 MTG1Q9BT17 334 aaPredicted RBP18.37■□□□□ 0.53
SYNGAP1-202ENST00000418600 NLRC4Q9NPP4 1024 aa18.37■□□□□ 0.53
SYNGAP1-202ENST00000418600 IFNAR1P17181 557 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms