RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 ABRAXAS1Q6UWZ7 409 aa6.62□□□□□ -1.35
CBX1P3-201ENST00000413296 ADAMTSL4Q6UY14 1074 aa6.62□□□□□ -1.35
CBX1P3-201ENST00000413296 MPRIPQ6WCQ1 1025 aa6.62□□□□□ -1.35
CBX1P3-201ENST00000413296 KRT74Q7RTS7 529 aa6.62□□□□□ -1.35
CBX1P3-201ENST00000413296 KRT25Q7Z3Z0 450 aa6.62□□□□□ -1.35
CBX1P3-201ENST00000413296 TRIM59Q8IWR1 403 aa6.62□□□□□ -1.35
CBX1P3-201ENST00000413296 CRACR2BQ8N4Y2 399 aaPredicted RBP6.62□□□□□ -1.35
CBX1P3-201ENST00000413296 ATG16L2Q8NAA4 619 aa6.62□□□□□ -1.35
CBX1P3-201ENST00000413296 EHBP1Q8NDI1 1231 aa6.62□□□□□ -1.35
CBX1P3-201ENST00000413296 SIMC1Q8NDZ2 872 aa6.62□□□□□ -1.35
CBX1P3-201ENST00000413296 BRI3BPQ8WY22 251 aa6.62□□□□□ -1.35
CBX1P3-201ENST00000413296 NANOS1Q8WY41 292 aaKnown RBP6.62□□□□□ -1.35
CBX1P3-201ENST00000413296 JAKMIP2Q96AA8 810 aa6.62□□□□□ -1.35
CBX1P3-201ENST00000413296 SLC6A18Q96N87 628 aa6.62□□□□□ -1.35
CBX1P3-201ENST00000413296 ZIC5Q96T25 663 aa6.62□□□□□ -1.35
CBX1P3-201ENST00000413296 GBP3Q9H0R5 595 aa6.62□□□□□ -1.35
CBX1P3-201ENST00000413296 CLEC4MQ9H2X3 399 aaPredicted RBP6.62□□□□□ -1.35
CBX1P3-201ENST00000413296 GHITMQ9H3K2 345 aa6.62□□□□□ -1.35
CBX1P3-201ENST00000413296 PRDM5Q9NQX1 630 aaPredicted RBP6.62□□□□□ -1.35
CBX1P3-201ENST00000413296 COMMD8Q9NX08 183 aa6.62□□□□□ -1.35
CBX1P3-201ENST00000413296 ZSWIM5Q9P217 1185 aa6.62□□□□□ -1.35
CBX1P3-201ENST00000413296 LRFN1Q9P244 771 aa6.62□□□□□ -1.35
CBX1P3-201ENST00000413296 TBC1D29Q9UFV1 150 aa6.62□□□□□ -1.35
CBX1P3-201ENST00000413296 ITGB1BP2Q9UKP3 347 aa6.62□□□□□ -1.35
CBX1P3-201ENST00000413296 BLOC1S6Q9UL45 172 aa6.62□□□□□ -1.35
CBX1P3-201ENST00000413296 AXIN2Q9Y2T1 843 aa6.62□□□□□ -1.35
CBX1P3-201ENST00000413296 C17orf113A0A1B0GUU1 675 aa6.61□□□□□ -1.35
CBX1P3-201ENST00000413296 CHURC1-FNTBB4DL54 471 aa6.61□□□□□ -1.35
CBX1P3-201ENST00000413296 NFKBIEO00221 500 aa6.61□□□□□ -1.35
CBX1P3-201ENST00000413296 PPM1BO75688 479 aa6.61□□□□□ -1.35
CBX1P3-201ENST00000413296 URI1O94763 535 aaPredicted RBP6.61□□□□□ -1.35
CBX1P3-201ENST00000413296 PAPLNO95428 1278 aa6.61□□□□□ -1.35
CBX1P3-201ENST00000413296 C5AR1P21730 350 aa6.61□□□□□ -1.35
CBX1P3-201ENST00000413296 TARSP26639 723 aaKnown RBP6.61□□□□□ -1.35
CBX1P3-201ENST00000413296 HTR1BP28222 390 aa6.61□□□□□ -1.35
CBX1P3-201ENST00000413296 GFRA1P56159 465 aa6.61□□□□□ -1.35
CBX1P3-201ENST00000413296 UBXN2AP68543 259 aa6.61□□□□□ -1.35
CBX1P3-201ENST00000413296 ALDH6A1Q02252 535 aaKnown RBP6.61□□□□□ -1.35
CBX1P3-201ENST00000413296 PDE4BQ07343 736 aa6.61□□□□□ -1.35
CBX1P3-201ENST00000413296 GALNT1Q10472 559 aaPredicted RBP6.61□□□□□ -1.35
CBX1P3-201ENST00000413296 LRP8Q14114 963 aa6.61□□□□□ -1.35
CBX1P3-201ENST00000413296 SF1Q15637 639 aaKnown RBP6.61□□□□□ -1.35
CBX1P3-201ENST00000413296 FBXO47Q5MNV8 452 aa6.61□□□□□ -1.35
CBX1P3-201ENST00000413296 HAUS3Q68CZ6 603 aa6.61□□□□□ -1.35
CBX1P3-201ENST00000413296 POMZP3Q6PJE2 187 aa6.61□□□□□ -1.35
CBX1P3-201ENST00000413296 LMBR1LQ6UX01 489 aa6.61□□□□□ -1.35
CBX1P3-201ENST00000413296 USP53Q70EK8 1073 aa6.61□□□□□ -1.35
CBX1P3-201ENST00000413296 MTDHQ86UE4 582 aaKnown RBP6.61□□□□□ -1.35
CBX1P3-201ENST00000413296 RTKN2Q8IZC4 609 aa6.61□□□□□ -1.35
CBX1P3-201ENST00000413296 MICALL1Q8N3F8 863 aa6.61□□□□□ -1.35
CBX1P3-201ENST00000413296 EFHBQ8N7U6 833 aa6.61□□□□□ -1.35
CBX1P3-201ENST00000413296 LILRB1Q8NHL6 650 aaPredicted RBP6.61□□□□□ -1.35
CBX1P3-201ENST00000413296 SSH1Q8WYL5 1049 aa6.61□□□□□ -1.35
CBX1P3-201ENST00000413296 RFFLQ8WZ73 363 aa6.61□□□□□ -1.35
CBX1P3-201ENST00000413296 RRP36Q96EU6 259 aaKnown RBP6.61□□□□□ -1.35
CBX1P3-201ENST00000413296 OTUD5Q96G74 571 aa6.61□□□□□ -1.35
CBX1P3-201ENST00000413296 LRFN3Q9BTN0 628 aa6.61□□□□□ -1.35
CBX1P3-201ENST00000413296 DCP1AQ9NPI6 582 aaPredicted RBP6.61□□□□□ -1.35
CBX1P3-201ENST00000413296 HAUS2Q9NVX0 235 aa6.61□□□□□ -1.35
CBX1P3-201ENST00000413296 H2AFY2Q9P0M6 372 aaPredicted RBP6.61□□□□□ -1.35
CBX1P3-201ENST00000413296 VPS28Q9UK41 221 aa6.61□□□□□ -1.35
CBX1P3-201ENST00000413296 PCDHA4Q9UN74 947 aa6.61□□□□□ -1.35
CBX1P3-201ENST00000413296 SMC3Q9UQE7 1217 aa6.61□□□□□ -1.35
CBX1P3-201ENST00000413296 AKT3Q9Y243 479 aa6.61□□□□□ -1.35
CBX1P3-201ENST00000413296 KNSTRNQ9Y448 316 aa6.61□□□□□ -1.35
CBX1P3-201ENST00000413296 PCDHA8Q9Y5H6 950 aa6.61□□□□□ -1.35
CBX1P3-201ENST00000413296 PCDHA11Q9Y5I1 949 aa6.61□□□□□ -1.35
CBX1P3-201ENST00000413296 TOPBP1Q92547 1522 aa6.6□□□□□ -1.35
CBX1P3-201ENST00000413296 ARAP1Q96P48 1450 aa6.6□□□□□ -1.35
CBX1P3-201ENST00000413296 SOGA1O94964 1423 aa6.6□□□□□ -1.35
CBX1P3-201ENST00000413296 TDRD9Q8NDG6 1382 aaKnown RBP6.6□□□□□ -1.35
CBX1P3-201ENST00000413296 PTPDC1A2A3K4 754 aa6.6□□□□□ -1.35
CBX1P3-201ENST00000413296 POM121BA6NF01 834 aa6.6□□□□□ -1.35
CBX1P3-201ENST00000413296 PDE2AO00408 941 aaPredicted RBP6.6□□□□□ -1.35
CBX1P3-201ENST00000413296 IPO5O00410 1097 aaKnown RBP6.6□□□□□ -1.35
CBX1P3-201ENST00000413296 DDX3XO00571 662 aaKnown RBP eCLIP6.6□□□□□ -1.35
CBX1P3-201ENST00000413296 COBLO75128 1261 aa6.6□□□□□ -1.35
CBX1P3-201ENST00000413296 EOMESO95936 686 aa6.6□□□□□ -1.35
CBX1P3-201ENST00000413296 B3GALT4O96024 378 aa6.6□□□□□ -1.35
CBX1P3-201ENST00000413296 ADH1CP00326 375 aa6.6□□□□□ -1.35
CBX1P3-201ENST00000413296 SLC4A1P02730 911 aa6.6□□□□□ -1.35
CBX1P3-201ENST00000413296 PSAPP07602 524 aa6.6□□□□□ -1.35
CBX1P3-201ENST00000413296 RARAP10276 462 aa6.6□□□□□ -1.35
CBX1P3-201ENST00000413296 MYF5P13349 255 aa6.6□□□□□ -1.35
CBX1P3-201ENST00000413296 ABCD1P33897 745 aa6.6□□□□□ -1.35
CBX1P3-201ENST00000413296 ACTN2P35609 894 aa6.6□□□□□ -1.35
CBX1P3-201ENST00000413296 ANP32AP39687 249 aaKnown RBP6.6□□□□□ -1.35
CBX1P3-201ENST00000413296 NOP2P46087 812 aaKnown RBP6.6□□□□□ -1.35
CBX1P3-201ENST00000413296 HSPA7P48741 367 aa6.6□□□□□ -1.35
CBX1P3-201ENST00000413296 ALDH9A1P49189 494 aa6.6□□□□□ -1.35
CBX1P3-201ENST00000413296 HMGN5P82970 282 aaKnown RBP6.6□□□□□ -1.35
CBX1P3-201ENST00000413296 NRG1Q02297 640 aaPredicted RBP6.6□□□□□ -1.35
CBX1P3-201ENST00000413296 CUL4AQ13619 759 aa6.6□□□□□ -1.35
CBX1P3-201ENST00000413296 MOGSQ13724 837 aa6.6□□□□□ -1.35
CBX1P3-201ENST00000413296 PFKFB4Q16877 469 aa6.6□□□□□ -1.35
CBX1P3-201ENST00000413296 FAM110CQ1W6H9 321 aa6.6□□□□□ -1.35
CBX1P3-201ENST00000413296 PGS1Q32NB8 556 aa6.6□□□□□ -1.35
CBX1P3-201ENST00000413296 ARL13BQ3SXY8 428 aa6.6□□□□□ -1.35
CBX1P3-201ENST00000413296 HSP90AB3PQ58FF7 597 aa6.6□□□□□ -1.35
CBX1P3-201ENST00000413296 MAP1SQ66K74 1059 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms