RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 CCDC189A1A4V9 331 aa10.73□□□□□ -0.69
PTPRM-203ENST00000400060 SLC34A1Q06495 639 aa10.73□□□□□ -0.69
PTPRM-203ENST00000400060 ITGB3BPQ13352 177 aaPredicted RBP10.73□□□□□ -0.69
PTPRM-203ENST00000400060 SHC4Q6S5L8 630 aa10.73□□□□□ -0.69
PTPRM-203ENST00000400060 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.73□□□□□ -0.69
PTPRM-203ENST00000400060 U2AF1L4Q8WU68 220 aaKnown RBP10.73□□□□□ -0.69
PTPRM-203ENST00000400060 MAGEB18Q96M61 343 aa10.73□□□□□ -0.69
PTPRM-203ENST00000400060 EEF2P13639 858 aaKnown RBP10.73□□□□□ -0.69
PTPRM-203ENST00000400060 TMOD1P28289 359 aa10.73□□□□□ -0.69
PTPRM-203ENST00000400060 SLC39A6Q13433 755 aa10.73□□□□□ -0.69
PTPRM-203ENST00000400060 STAT4Q14765 748 aa10.73□□□□□ -0.69
PTPRM-203ENST00000400060 PTPN21Q16825 1174 aa10.73□□□□□ -0.69
PTPRM-203ENST00000400060 SLC5A9Q2M3M2 681 aa10.73□□□□□ -0.69
PTPRM-203ENST00000400060 PARP6Q2NL67 630 aa10.73□□□□□ -0.69
PTPRM-203ENST00000400060 CWF19L2Q2TBE0 894 aaKnown RBP10.73□□□□□ -0.69
PTPRM-203ENST00000400060 MYOCDQ8IZQ8 938 aa10.73□□□□□ -0.69
PTPRM-203ENST00000400060 CNBD1Q8NA66 436 aa10.73□□□□□ -0.69
PTPRM-203ENST00000400060 KIFC3Q9BVG8 833 aa10.73□□□□□ -0.69
PTPRM-203ENST00000400060 RNF26Q9BY78 433 aaPredicted RBP10.73□□□□□ -0.69
PTPRM-203ENST00000400060 RBM12Q9NTZ6 932 aaKnown RBP10.73□□□□□ -0.69
PTPRM-203ENST00000400060 PLEKHG1Q9ULL1 1385 aa10.73□□□□□ -0.69
PTPRM-203ENST00000400060 FKBP6O75344 327 aa10.73□□□□□ -0.69
PTPRM-203ENST00000400060 SUPT3HO75486 399 aa10.73□□□□□ -0.69
PTPRM-203ENST00000400060 BRAFP15056 766 aa10.73□□□□□ -0.69
PTPRM-203ENST00000400060 HSPA1LP34931 641 aa10.73□□□□□ -0.69
PTPRM-203ENST00000400060 PGM1P36871 562 aa10.73□□□□□ -0.69
PTPRM-203ENST00000400060 MTTPP55157 894 aa10.73□□□□□ -0.69
PTPRM-203ENST00000400060 CYP27A1Q02318 531 aa10.73□□□□□ -0.69
PTPRM-203ENST00000400060 PRR16Q569H4 304 aa10.73□□□□□ -0.69
PTPRM-203ENST00000400060 USPL1Q5W0Q7 1092 aa10.73□□□□□ -0.69
PTPRM-203ENST00000400060 TTLL11Q8NHH1 800 aa10.73□□□□□ -0.69
PTPRM-203ENST00000400060 TRPC4APQ8TEL6 797 aa10.73□□□□□ -0.69
PTPRM-203ENST00000400060 PHKBQ93100 1093 aa10.73□□□□□ -0.69
PTPRM-203ENST00000400060 XAB2Q9HCS7 855 aaKnown RBP10.73□□□□□ -0.69
PTPRM-203ENST00000400060 NLRC4Q9NPP4 1024 aa10.73□□□□□ -0.69
PTPRM-203ENST00000400060 ZC4H2Q9NQZ6 224 aa10.73□□□□□ -0.69
PTPRM-203ENST00000400060 MLH3Q9UHC1 1453 aa10.72□□□□□ -0.69
PTPRM-203ENST00000400060 CLASP2O75122 1294 aaKnown RBP10.72□□□□□ -0.69
PTPRM-203ENST00000400060 SRGNP10124 158 aa10.72□□□□□ -0.69
PTPRM-203ENST00000400060 PEX5P50542 639 aa10.72□□□□□ -0.69
PTPRM-203ENST00000400060 POLR2FP61218 127 aaKnown RBP10.72□□□□□ -0.69
PTPRM-203ENST00000400060 TMED2Q15363 201 aa10.72□□□□□ -0.69
PTPRM-203ENST00000400060 LRRC59Q96AG4 307 aaKnown RBP10.72□□□□□ -0.69
PTPRM-203ENST00000400060 FAM81BQ96LP2 452 aa10.72□□□□□ -0.69
PTPRM-203ENST00000400060 SERPINB12Q96P63 405 aa10.72□□□□□ -0.69
PTPRM-203ENST00000400060 MLXIPQ9HAP2 919 aa10.72□□□□□ -0.69
PTPRM-203ENST00000400060 CNOT7Q9UIV1 285 aaKnown RBP10.72□□□□□ -0.69
PTPRM-203ENST00000400060 TMED5Q9Y3A6 229 aa10.72□□□□□ -0.69
PTPRM-203ENST00000400060 INO80Q9ULG1 1556 aaPredicted RBP10.72□□□□□ -0.69
PTPRM-203ENST00000400060 KIF1BO60333 1816 aa10.72□□□□□ -0.69
PTPRM-203ENST00000400060 P4HA2O15460 535 aa10.72□□□□□ -0.69
PTPRM-203ENST00000400060 KCNA4P22459 653 aa10.72□□□□□ -0.69
PTPRM-203ENST00000400060 PTPN4P29074 926 aa10.72□□□□□ -0.69
PTPRM-203ENST00000400060 ALDH5A1P51649 535 aaPredicted RBP10.72□□□□□ -0.69
PTPRM-203ENST00000400060 STAT2P52630 851 aa10.72□□□□□ -0.69
PTPRM-203ENST00000400060 HDAC4P56524 1084 aa10.72□□□□□ -0.69
PTPRM-203ENST00000400060 ARHGAP4P98171 946 aa10.72□□□□□ -0.69
PTPRM-203ENST00000400060 CCDC14Q49A88 953 aa10.72□□□□□ -0.69
PTPRM-203ENST00000400060 LIN9Q5TKA1 542 aa10.72□□□□□ -0.69
PTPRM-203ENST00000400060 USP38Q8NB14 1042 aa10.72□□□□□ -0.69
PTPRM-203ENST00000400060 DCAF5Q96JK2 942 aa10.72□□□□□ -0.69
PTPRM-203ENST00000400060 TRAIPQ9BWF2 469 aa10.72□□□□□ -0.69
PTPRM-203ENST00000400060 FOXP3Q9BZS1 431 aa10.72□□□□□ -0.69
PTPRM-203ENST00000400060 CNGB3Q9NQW8 809 aa10.72□□□□□ -0.69
PTPRM-203ENST00000400060 MTO1Q9Y2Z2 717 aaKnown RBP10.72□□□□□ -0.69
PTPRM-203ENST00000400060 PENKP01210 267 aaPredicted RBP10.72□□□□□ -0.69
PTPRM-203ENST00000400060 KCNA6P17658 529 aa10.72□□□□□ -0.69
PTPRM-203ENST00000400060 CARSP49589 748 aaKnown RBP10.72□□□□□ -0.69
PTPRM-203ENST00000400060 ARFIP2P53365 341 aa10.72□□□□□ -0.69
PTPRM-203ENST00000400060 NANOGNBQ7Z5D8 188 aa10.72□□□□□ -0.69
PTPRM-203ENST00000400060 FAM161BQ96MY7 647 aa10.72□□□□□ -0.69
PTPRM-203ENST00000400060 NDST4Q9H3R1 872 aa10.72□□□□□ -0.69
PTPRM-203ENST00000400060 ANAPC5Q9UJX4 755 aa10.72□□□□□ -0.69
PTPRM-203ENST00000400060 PNMA2Q9UL42 364 aa10.72□□□□□ -0.69
PTPRM-203ENST00000400060 R3HDM2Q9Y2K5 976 aaKnown RBP10.72□□□□□ -0.69
PTPRM-203ENST00000400060 ZNF185O15231 689 aa10.72□□□□□ -0.69
PTPRM-203ENST00000400060 BIRC5O15392 142 aa10.72□□□□□ -0.69
PTPRM-203ENST00000400060 DEAF1O75398 565 aaPredicted RBP10.72□□□□□ -0.69
PTPRM-203ENST00000400060 UBOX5O94941 541 aa10.72□□□□□ -0.69
PTPRM-203ENST00000400060 IFNAR1P17181 557 aa10.72□□□□□ -0.69
PTPRM-203ENST00000400060 RFC5P40937 340 aa10.72□□□□□ -0.69
PTPRM-203ENST00000400060 FXR1P51114 621 aaKnown RBP eCLIP10.72□□□□□ -0.69
PTPRM-203ENST00000400060 PIK3AP1Q6ZUJ8 805 aa10.72□□□□□ -0.69
PTPRM-203ENST00000400060 PROM2Q8N271 834 aa10.72□□□□□ -0.69
PTPRM-203ENST00000400060 LZTS2Q9BRK4 669 aa10.72□□□□□ -0.69
PTPRM-203ENST00000400060 ANKFY1Q9P2R3 1169 aa10.72□□□□□ -0.69
PTPRM-203ENST00000400060 ARMCX3Q9UH62 379 aaPredicted RBP10.72□□□□□ -0.69
PTPRM-203ENST00000400060 LRRC7Q96NW7 1537 aa10.72□□□□□ -0.69
PTPRM-203ENST00000400060 KDM3AQ9Y4C1 1321 aa10.71□□□□□ -0.69
PTPRM-203ENST00000400060 UBTFL6P0CB48 400 aaPredicted RBP10.71□□□□□ -0.69
PTPRM-203ENST00000400060 SCG2P13521 617 aa10.71□□□□□ -0.69
PTPRM-203ENST00000400060 ZNF18P17022 549 aa10.71□□□□□ -0.69
PTPRM-203ENST00000400060 RINLQ6ZS11 566 aa10.71□□□□□ -0.69
PTPRM-203ENST00000400060 RHOT2Q8IXI1 618 aa10.71□□□□□ -0.69
PTPRM-203ENST00000400060 CASKIN2Q8WXE0 1202 aa10.71□□□□□ -0.69
PTPRM-203ENST00000400060 SYN2Q92777 582 aaPredicted RBP10.71□□□□□ -0.69
PTPRM-203ENST00000400060 BHMTQ93088 406 aa10.71□□□□□ -0.69
PTPRM-203ENST00000400060 EAF2Q96CJ1 260 aaPredicted RBP10.71□□□□□ -0.69
PTPRM-203ENST00000400060 MPP4Q96JB8 637 aa10.71□□□□□ -0.69
PTPRM-203ENST00000400060 HMGB2P26583 209 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms