RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 PCDHGB4Q9UN71 923 aa15.78■□□□□ 0.12
CCDC50-201ENST00000392455 MRFAP1Q9Y605 127 aa15.78■□□□□ 0.12
CCDC50-201ENST00000392455 TSPOAP1O95153 1857 aa15.78■□□□□ 0.12
CCDC50-201ENST00000392455 ANP32DO95626 131 aa15.78■□□□□ 0.12
CCDC50-201ENST00000392455 RALBP11234 206 aa15.78■□□□□ 0.12
CCDC50-201ENST00000392455 ZNF654Q8IZM8 581 aa15.78■□□□□ 0.12
CCDC50-201ENST00000392455 CDHR1Q96JP9 859 aa15.78■□□□□ 0.12
CCDC50-201ENST00000392455 SEL1LQ9UBV2 794 aa15.78■□□□□ 0.12
CCDC50-201ENST00000392455 USP21Q9UK80 565 aa15.78■□□□□ 0.12
CCDC50-201ENST00000392455 RECQLP46063 649 aaPredicted RBP15.78■□□□□ 0.12
CCDC50-201ENST00000392455 CCT5P48643 541 aa15.78■□□□□ 0.12
CCDC50-201ENST00000392455 CENPPQ6IPU0 288 aa15.78■□□□□ 0.12
CCDC50-201ENST00000392455 FOPNLQ96NB1 174 aa15.78■□□□□ 0.12
CCDC50-201ENST00000392455 OLFM1Q99784 485 aa15.78■□□□□ 0.12
CCDC50-201ENST00000392455 ZNF556Q9HAH1 456 aa15.78■□□□□ 0.12
CCDC50-201ENST00000392455 HPCAL4Q9UM19 191 aa15.78■□□□□ 0.12
CCDC50-201ENST00000392455 FMNL1O95466 1100 aaPredicted RBP15.78■□□□□ 0.12
CCDC50-201ENST00000392455 XKR9Q5GH70 373 aa15.78■□□□□ 0.12
CCDC50-201ENST00000392455 RNF219Q5W0B1 726 aaPredicted RBP15.78■□□□□ 0.12
CCDC50-201ENST00000392455 DDX17Q92841 729 aaKnown RBP15.78■□□□□ 0.12
CCDC50-201ENST00000392455 TOM1L1O75674 476 aa15.78■□□□□ 0.12
CCDC50-201ENST00000392455 RFX6Q8HWS3 928 aa15.78■□□□□ 0.12
CCDC50-201ENST00000392455 NACC1Q96RE7 527 aa15.78■□□□□ 0.12
CCDC50-201ENST00000392455 FAM129AQ9BZQ8 928 aa15.78■□□□□ 0.12
CCDC50-201ENST00000392455 NBNO60934 754 aa15.77■□□□□ 0.12
CCDC50-201ENST00000392455 DSCC1Q9BVC3 393 aa15.77■□□□□ 0.12
CCDC50-201ENST00000392455 FOXP3Q9BZS1 431 aa15.77■□□□□ 0.12
CCDC50-201ENST00000392455 PCDHA12Q9UN75 941 aa15.77■□□□□ 0.12
CCDC50-201ENST00000392455 KIF21AQ7Z4S6 1674 aa15.77■□□□□ 0.12
CCDC50-201ENST00000392455 RPN1P04843 607 aaKnown RBP15.77■□□□□ 0.12
CCDC50-201ENST00000392455 POLR2MP0CAP2 368 aa15.77■□□□□ 0.12
CCDC50-201ENST00000392455 DLATP10515 647 aaKnown RBP15.77■□□□□ 0.12
CCDC50-201ENST00000392455 IL13P35225 146 aa15.77■□□□□ 0.12
CCDC50-201ENST00000392455 TMEM259Q4ZIN3 620 aa15.77■□□□□ 0.12
CCDC50-201ENST00000392455 NUDT18Q6ZVK8 323 aa15.77■□□□□ 0.12
CCDC50-201ENST00000392455 TRIM63Q969Q1 353 aa15.77■□□□□ 0.12
CCDC50-201ENST00000392455 AK8Q96MA6 479 aa15.77■□□□□ 0.12
CCDC50-201ENST00000392455 NRBP2Q9NSY0 501 aa15.77■□□□□ 0.12
CCDC50-201ENST00000392455 DDIT3P35638 169 aa15.77■□□□□ 0.12
CCDC50-201ENST00000392455 POLGP54098 1239 aaPredicted RBP15.77■□□□□ 0.12
CCDC50-201ENST00000392455 KRCC1Q9NPI7 259 aaPredicted RBP15.77■□□□□ 0.12
CCDC50-201ENST00000392455 ARIH2O95376 493 aa15.77■□□□□ 0.11
CCDC50-201ENST00000392455 STX3Q13277 289 aa15.77■□□□□ 0.11
CCDC50-201ENST00000392455 KCTD6Q8NC69 237 aa15.77■□□□□ 0.11
CCDC50-201ENST00000392455 TTC8Q8TAM2 541 aa15.77■□□□□ 0.11
CCDC50-201ENST00000392455 MAML1Q92585 1016 aa15.77■□□□□ 0.11
CCDC50-201ENST00000392455 ABCC10Q5T3U5 1492 aa15.77■□□□□ 0.11
CCDC50-201ENST00000392455 TRAPPC8Q9Y2L5 1435 aa15.77■□□□□ 0.11
CCDC50-201ENST00000392455 BUB1O43683 1085 aa15.77■□□□□ 0.11
CCDC50-201ENST00000392455 SCNN1DP51172 638 aa15.77■□□□□ 0.11
CCDC50-201ENST00000392455 EPHB1P54762 984 aa15.77■□□□□ 0.11
CCDC50-201ENST00000392455 EFTUD2Q15029 972 aaKnown RBP eCLIP15.77■□□□□ 0.113e-6■□□□□ 11.1
CCDC50-201ENST00000392455 SYT2Q8N9I0 419 aaPredicted RBP15.77■□□□□ 0.11
CCDC50-201ENST00000392455 RNF139Q8WU17 664 aa15.77■□□□□ 0.11
CCDC50-201ENST00000392455 TJP3O95049 919 aa15.77■□□□□ 0.11
CCDC50-201ENST00000392455 HOXB7P09629 217 aa15.77■□□□□ 0.11
CCDC50-201ENST00000392455 SDR42E1Q8WUS8 393 aa15.77■□□□□ 0.11
CCDC50-201ENST00000392455 NSMCE4AQ9NXX6 385 aa15.77■□□□□ 0.11
CCDC50-201ENST00000392455 PIK3R2O00459 728 aa15.76■□□□□ 0.11
CCDC50-201ENST00000392455 GUCA1CO95843 209 aa15.76■□□□□ 0.11
CCDC50-201ENST00000392455 IMPDH2P12268 514 aa15.76■□□□□ 0.11
CCDC50-201ENST00000392455 BLIDQ8IZY5 108 aa15.76■□□□□ 0.11
CCDC50-201ENST00000392455 NT5C2P49902 561 aa15.76■□□□□ 0.11
CCDC50-201ENST00000392455 GUCY2DQ02846 1103 aa15.76■□□□□ 0.11
CCDC50-201ENST00000392455 NUGGCQ68CJ6 796 aa15.76■□□□□ 0.11
CCDC50-201ENST00000392455 DNAJC10Q8IXB1 793 aa15.76■□□□□ 0.11
CCDC50-201ENST00000392455 PPP1R2P1Q96PQ5 205 aa15.76■□□□□ 0.11
CCDC50-201ENST00000392455 CYP26B1Q9NR63 512 aa15.76■□□□□ 0.11
CCDC50-201ENST00000392455 KIAA0556O60303 1618 aa15.76■□□□□ 0.11
CCDC50-201ENST00000392455 EXOC3L4Q17RC7 722 aa15.76■□□□□ 0.11
CCDC50-201ENST00000392455 CAPN12Q6ZSI9 719 aa15.76■□□□□ 0.11
CCDC50-201ENST00000392455 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.76■□□□□ 0.112e-7■□□□□ 10.6
CCDC50-201ENST00000392455 FARP1Q9Y4F1 1045 aaPredicted RBP15.76■□□□□ 0.11
CCDC50-201ENST00000392455 SYNJ2BP-COX16A0A087WUM0 186 aa15.76■□□□□ 0.11
CCDC50-201ENST00000392455 LAMB3Q13751 1172 aa15.76■□□□□ 0.11
CCDC50-201ENST00000392455 CERKLQ49MI3 558 aaPredicted RBP15.76■□□□□ 0.11
CCDC50-201ENST00000392455 NT5C1BQ96P26 610 aa15.76■□□□□ 0.11
CCDC50-201ENST00000392455 COX16Q9P0S2 106 aa15.76■□□□□ 0.11
CCDC50-201ENST00000392455 FBXO2Q9UK22 296 aaPredicted RBP15.76■□□□□ 0.11
CCDC50-201ENST00000392455 NEURL1BA8MQ27 555 aa15.76■□□□□ 0.11
CCDC50-201ENST00000392455 ARL2BPQ9Y2Y0 163 aa15.76■□□□□ 0.11
CCDC50-201ENST00000392455 KIF1BO60333 1816 aa15.76■□□□□ 0.11
CCDC50-201ENST00000392455 TBC1D9BQ66K14 1250 aa15.76■□□□□ 0.11
CCDC50-201ENST00000392455 ARMC2Q8NEN0 867 aa15.76■□□□□ 0.11
CCDC50-201ENST00000392455 SUGCTQ9HAC7 445 aa15.76■□□□□ 0.11
CCDC50-201ENST00000392455 HSPA4LO95757 839 aa15.75■□□□□ 0.11
CCDC50-201ENST00000392455 SERPINB1P30740 379 aa15.75■□□□□ 0.11
CCDC50-201ENST00000392455 MAPK4P31152 587 aa15.75■□□□□ 0.11
CCDC50-201ENST00000392455 TRAF7Q6Q0C0 670 aa15.75■□□□□ 0.11
CCDC50-201ENST00000392455 PLD3Q8IV08 490 aa15.75■□□□□ 0.11
CCDC50-201ENST00000392455 TTC13Q8NBP0 860 aa15.75■□□□□ 0.11
CCDC50-201ENST00000392455 THRAP3Q9Y2W1 955 aaKnown RBP15.75■□□□□ 0.11
CCDC50-201ENST00000392455 PBRM1Q86U86 1689 aa15.75■□□□□ 0.11
CCDC50-201ENST00000392455 TARSL2A2RTX5 802 aaKnown RBP15.75■□□□□ 0.11
CCDC50-201ENST00000392455 DOK7Q18PE1 504 aa15.75■□□□□ 0.11
CCDC50-201ENST00000392455 SLFNL1Q499Z3 407 aa15.75■□□□□ 0.11
CCDC50-201ENST00000392455 ADAT2Q7Z6V5 191 aaKnown RBP15.75■□□□□ 0.11
CCDC50-201ENST00000392455 RNF103-CHMP3A0A140T963 221 aa15.75■□□□□ 0.11
CCDC50-201ENST00000392455 USP17L12C9JPN9 530 aa15.75■□□□□ 0.11
CCDC50-201ENST00000392455 USP17L21D6R901 530 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms