RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 SFMBT1Q9UHJ3 866 aa5.21□□□□□ -1.58
TRAV40-201ENST00000390467 PTCH2Q9Y6C5 1203 aa5.21□□□□□ -1.58
TRAV40-201ENST00000390467 ESYT3A0FGR9 886 aa5.2□□□□□ -1.58
TRAV40-201ENST00000390467 PATE3B3GLJ2 98 aa5.2□□□□□ -1.58
TRAV40-201ENST00000390467 CLASP2O75122 1294 aaKnown RBP5.2□□□□□ -1.58
TRAV40-201ENST00000390467 KCNA6P17658 529 aa5.2□□□□□ -1.58
TRAV40-201ENST00000390467 USP10Q14694 798 aaKnown RBP5.2□□□□□ -1.58
TRAV40-201ENST00000390467 C2orf27AQ580R0 203 aa5.2□□□□□ -1.58
TRAV40-201ENST00000390467 ZC3H12BQ5HYM0 836 aaKnown RBP5.2□□□□□ -1.58
TRAV40-201ENST00000390467 MKL1Q969V6 931 aa5.2□□□□□ -1.58
TRAV40-201ENST00000390467 AMNQ9BXJ7 453 aa5.2□□□□□ -1.58
TRAV40-201ENST00000390467 CELF4Q9BZC1 486 aaKnown RBP5.2□□□□□ -1.58
TRAV40-201ENST00000390467 INCENPQ9NQS7 918 aa5.2□□□□□ -1.58
TRAV40-201ENST00000390467 TCRBV16S1A1N1A0A5B0 115 aa5.19□□□□□ -1.58
TRAV40-201ENST00000390467 RASSF10A6NK89 507 aa5.19□□□□□ -1.58
TRAV40-201ENST00000390467 SCDO00767 359 aa5.19□□□□□ -1.58
TRAV40-201ENST00000390467 EFCAB14O75071 495 aa5.19□□□□□ -1.58
TRAV40-201ENST00000390467 POLD1P28340 1107 aa5.19□□□□□ -1.58
TRAV40-201ENST00000390467 ADCY8P40145 1251 aa5.19□□□□□ -1.58
TRAV40-201ENST00000390467 RRADP55042 308 aa5.19□□□□□ -1.58
TRAV40-201ENST00000390467 R3HDM1Q15032 1099 aaKnown RBP5.19□□□□□ -1.58
TRAV40-201ENST00000390467 ZNF585AQ6P3V2 769 aa5.19□□□□□ -1.58
TRAV40-201ENST00000390467 OVCH1Q7RTY7 1134 aa5.19□□□□□ -1.58
TRAV40-201ENST00000390467 ZSWIM2Q8NEG5 633 aa5.19□□□□□ -1.58
TRAV40-201ENST00000390467 THAP3Q8WTV1 239 aaPredicted RBP5.19□□□□□ -1.58
TRAV40-201ENST00000390467 LRRC37BQ96QE4 947 aa5.19□□□□□ -1.58
TRAV40-201ENST00000390467 KLC2Q9H0B6 622 aa5.19□□□□□ -1.58
TRAV40-201ENST00000390467 NCOA5Q9HCD5 579 aaKnown RBP5.19□□□□□ -1.58
TRAV40-201ENST00000390467 TRIM39Q9HCM9 518 aa5.19□□□□□ -1.58
TRAV40-201ENST00000390467 GSTA4O15217 222 aa5.18□□□□□ -1.58
TRAV40-201ENST00000390467 KCNQ2O43526 872 aa5.18□□□□□ -1.58
TRAV40-201ENST00000390467 FOXS1O43638 330 aa5.18□□□□□ -1.58
TRAV40-201ENST00000390467 ETV4P43268 484 aa5.18□□□□□ -1.58
TRAV40-201ENST00000390467 HERVK_113P62684 666 aa5.18□□□□□ -1.58
TRAV40-201ENST00000390467 SF3A1Q15459 793 aaKnown RBP5.18□□□□□ -1.58
TRAV40-201ENST00000390467 STILQ15468 1287 aa5.18□□□□□ -1.58
TRAV40-201ENST00000390467 TBR1Q16650 682 aa5.18□□□□□ -1.58
TRAV40-201ENST00000390467 RNF151Q2KHN1 245 aa5.18□□□□□ -1.58
TRAV40-201ENST00000390467 WDR72Q3MJ13 1102 aa5.18□□□□□ -1.58
TRAV40-201ENST00000390467 KANK2Q63ZY3 851 aa5.18□□□□□ -1.58
TRAV40-201ENST00000390467 TCTN3Q6NUS6 607 aa5.18□□□□□ -1.58
TRAV40-201ENST00000390467 EP400NLQ6ZTU2 488 aa5.18□□□□□ -1.58
TRAV40-201ENST00000390467 LARP4Q71RC2 724 aaKnown RBP eCLIP5.18□□□□□ -1.58
TRAV40-201ENST00000390467 SPRED1Q7Z699 444 aa5.18□□□□□ -1.58
TRAV40-201ENST00000390467 PALM2Q8IXS6 379 aa5.18□□□□□ -1.58
TRAV40-201ENST00000390467 ASB15Q8WXK1 588 aa5.18□□□□□ -1.58
TRAV40-201ENST00000390467 NEIL1Q96FI4 390 aaPredicted RBP5.18□□□□□ -1.58
TRAV40-201ENST00000390467 MAGEB10Q96LZ2 347 aaPredicted RBP5.18□□□□□ -1.58
TRAV40-201ENST00000390467 LMF1Q96S06 567 aa5.18□□□□□ -1.58
TRAV40-201ENST00000390467 MRPL4Q9BYD3 311 aaKnown RBP5.18□□□□□ -1.58
TRAV40-201ENST00000390467 KIAA1683Q9H0B3 1180 aa5.18□□□□□ -1.58
TRAV40-201ENST00000390467 OSBPL2Q9H1P3 480 aa5.18□□□□□ -1.58
TRAV40-201ENST00000390467 SEC61A2Q9H9S3 476 aa5.18□□□□□ -1.58
TRAV40-201ENST00000390467 UCKL1Q9NWZ5 548 aa5.18□□□□□ -1.58
TRAV40-201ENST00000390467 GALNT8Q9NY28 637 aa5.18□□□□□ -1.58
TRAV40-201ENST00000390467 TSC22D4Q9Y3Q8 395 aa5.18□□□□□ -1.58
TRAV40-201ENST00000390467 MATN2O00339 956 aa5.17□□□□□ -1.58
TRAV40-201ENST00000390467 CUTAO60888 179 aa5.17□□□□□ -1.58
TRAV40-201ENST00000390467 SELENOPP49908 381 aa5.17□□□□□ -1.58
TRAV40-201ENST00000390467 BMS1Q14692 1282 aaKnown RBP5.17□□□□□ -1.58
TRAV40-201ENST00000390467 NOLC1Q14978 699 aaKnown RBP eCLIP5.17□□□□□ -1.58
TRAV40-201ENST00000390467 TMEM177Q53S58 311 aa5.17□□□□□ -1.58
TRAV40-201ENST00000390467 IFNL2Q8IZJ0 200 aa5.17□□□□□ -1.58
TRAV40-201ENST00000390467 IGSF22Q8N9C0 903 aa5.17□□□□□ -1.58
TRAV40-201ENST00000390467 Q8TCH9 128 aa5.17□□□□□ -1.58
TRAV40-201ENST00000390467 DLG3Q92796 817 aa5.17□□□□□ -1.58
TRAV40-201ENST00000390467 CARD11Q9BXL7 1154 aa5.17□□□□□ -1.58
TRAV40-201ENST00000390467 ZDHHC5Q9C0B5 715 aa5.17□□□□□ -1.58
TRAV40-201ENST00000390467 KANSL2Q9H9L4 492 aa5.17□□□□□ -1.58
TRAV40-201ENST00000390467 KCNH7Q9NS40 1196 aa5.17□□□□□ -1.58
TRAV40-201ENST00000390467 B3GALT1Q9Y5Z6 326 aa5.17□□□□□ -1.58
TRAV40-201ENST00000390467 ZNF623O75123 536 aa5.16□□□□□ -1.58
TRAV40-201ENST00000390467 RAPGEF3O95398 923 aa5.16□□□□□ -1.58
TRAV40-201ENST00000390467 KCNQ1P51787 676 aa5.16□□□□□ -1.58
TRAV40-201ENST00000390467 CD83Q01151 205 aa5.16□□□□□ -1.58
TRAV40-201ENST00000390467 SQSTM1Q13501 440 aa5.16□□□□□ -1.58
TRAV40-201ENST00000390467 CATSPEREQ5SY80 951 aa5.16□□□□□ -1.58
TRAV40-201ENST00000390467 SOGA3Q5TF21 947 aa5.16□□□□□ -1.58
TRAV40-201ENST00000390467 DPP8Q6V1X1 898 aaPredicted RBP5.16□□□□□ -1.58
TRAV40-201ENST00000390467 SH3RF3Q8TEJ3 882 aaPredicted RBP5.16□□□□□ -1.58
TRAV40-201ENST00000390467 SREK1Q8WXA9 508 aaKnown RBP5.16□□□□□ -1.58
TRAV40-201ENST00000390467 WNK4Q96J92 1243 aa5.16□□□□□ -1.58
TRAV40-201ENST00000390467 CLUHP3Q96NS8 147 aa5.16□□□□□ -1.58
TRAV40-201ENST00000390467 TMPRSS5Q9H3S3 457 aa5.16□□□□□ -1.58
TRAV40-201ENST00000390467 CDC42EP3Q9UKI2 254 aa5.16□□□□□ -1.58
TRAV40-201ENST00000390467 CDK11AQ9UQ88 783 aaPredicted RBP5.16□□□□□ -1.58
TRAV40-201ENST00000390467 PRAMEF22A3QJZ6 481 aa5.15□□□□□ -1.59
TRAV40-201ENST00000390467 FOXP2O15409 715 aa5.15□□□□□ -1.59
TRAV40-201ENST00000390467 HMGCRP04035 888 aa5.15□□□□□ -1.59
TRAV40-201ENST00000390467 ECE1P42892 770 aa5.15□□□□□ -1.59
TRAV40-201ENST00000390467 ZXDAP98168 799 aa5.15□□□□□ -1.59
TRAV40-201ENST00000390467 TAX1BP1Q86VP1 789 aa5.15□□□□□ -1.59
TRAV40-201ENST00000390467 GBP4Q96PP9 640 aa5.15□□□□□ -1.59
TRAV40-201ENST00000390467 DPYSL5Q9BPU6 564 aa5.15□□□□□ -1.59
TRAV40-201ENST00000390467 BTBD2Q9BX70 525 aa5.15□□□□□ -1.59
TRAV40-201ENST00000390467 OR10A5Q9H207 317 aa5.15□□□□□ -1.59
TRAV40-201ENST00000390467 DEF6Q9H4E7 631 aa5.15□□□□□ -1.59
TRAV40-201ENST00000390467 OAZ3Q9UMX2 235 aa5.15□□□□□ -1.59
TRAV40-201ENST00000390467 SLC12A8A0AV02 714 aa5.14□□□□□ -1.59
TRAV40-201ENST00000390467 GLRX3O76003 335 aaKnown RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms