RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 POTEB3A0JP26 581 aa18.51■□□□□ 0.55
MCF2L-203ENST00000375604 POTECB2RU33 542 aa18.51■□□□□ 0.55
MCF2L-203ENST00000375604 CDC27P30260 824 aa18.51■□□□□ 0.55
MCF2L-203ENST00000375604 SPP2Q13103 211 aa18.51■□□□□ 0.55
MCF2L-203ENST00000375604 POTEBQ6S5H4 581 aa18.51■□□□□ 0.55
MCF2L-203ENST00000375604 CUEDC2Q9H467 287 aa18.51■□□□□ 0.55
MCF2L-203ENST00000375604 INTUQ9ULD6 942 aa18.51■□□□□ 0.55
MCF2L-203ENST00000375604 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.51■□□□□ 0.55
MCF2L-203ENST00000375604 MAP3K4Q9Y6R4 1608 aa18.51■□□□□ 0.55
MCF2L-203ENST00000375604 KRT3P12035 628 aa18.5■□□□□ 0.55
MCF2L-203ENST00000375604 CACNB2Q08289 660 aaPredicted RBP18.5■□□□□ 0.55
MCF2L-203ENST00000375604 TOGARAM2Q6ZUX3 1019 aa18.5■□□□□ 0.55
MCF2L-203ENST00000375604 PDZD8Q8NEN9 1154 aa18.5■□□□□ 0.55
MCF2L-203ENST00000375604 SLC12A6Q9UHW9 1150 aa18.5■□□□□ 0.55
MCF2L-203ENST00000375604 ETF1P62495 437 aaKnown RBP18.5■□□□□ 0.55
MCF2L-203ENST00000375604 PPP4R4Q6NUP7 873 aa18.5■□□□□ 0.55
MCF2L-203ENST00000375604 DAAM1Q9Y4D1 1078 aa18.5■□□□□ 0.55
MCF2L-203ENST00000375604 POTEFA5A3E0 1075 aa18.5■□□□□ 0.55
MCF2L-203ENST00000375604 POTEIP0CG38 1075 aa18.5■□□□□ 0.55
MCF2L-203ENST00000375604 SRGAP2BP0DMP2 458 aa18.5■□□□□ 0.55
MCF2L-203ENST00000375604 MSH2P43246 934 aa18.5■□□□□ 0.55
MCF2L-203ENST00000375604 CCT5P48643 541 aa18.5■□□□□ 0.55
MCF2L-203ENST00000375604 FKBP3Q00688 224 aaKnown RBP18.5■□□□□ 0.55
MCF2L-203ENST00000375604 NECTIN1Q15223 517 aa18.5■□□□□ 0.55
MCF2L-203ENST00000375604 POTEGQ6S5H5 508 aa18.5■□□□□ 0.55
MCF2L-203ENST00000375604 POTEEQ6S8J3 1075 aa18.5■□□□□ 0.55
MCF2L-203ENST00000375604 TMC4Q7Z404 712 aa18.5■□□□□ 0.55
MCF2L-203ENST00000375604 FAM160B2Q86V87 743 aa18.5■□□□□ 0.55
MCF2L-203ENST00000375604 HOMER3Q9NSC5 361 aa18.5■□□□□ 0.55
MCF2L-203ENST00000375604 SHROOM2Q13796 1616 aa18.5■□□□□ 0.55
MCF2L-203ENST00000375604 ZNF853P0CG23 659 aa18.5■□□□□ 0.55
MCF2L-203ENST00000375604 GCFC2P16383 781 aaKnown RBP18.5■□□□□ 0.55
MCF2L-203ENST00000375604 ELF1P32519 619 aa18.5■□□□□ 0.55
MCF2L-203ENST00000375604 ZSCAN26Q16670 478 aa18.5■□□□□ 0.55
MCF2L-203ENST00000375604 SAAL1Q96ER3 474 aa18.5■□□□□ 0.55
MCF2L-203ENST00000375604 MAGEF1Q9HAY2 307 aa18.5■□□□□ 0.55
MCF2L-203ENST00000375604 DENND3A2RUS2 1198 aa18.5■□□□□ 0.55
MCF2L-203ENST00000375604 MMP19Q99542 508 aa18.5■□□□□ 0.55
MCF2L-203ENST00000375604 GINM1Q9NU53 330 aa18.5■□□□□ 0.55
MCF2L-203ENST00000375604 CREB3O43889 395 aa18.49■□□□□ 0.55
MCF2L-203ENST00000375604 KRT31Q15323 416 aa18.49■□□□□ 0.55
MCF2L-203ENST00000375604 PFDN6O15212 129 aa18.49■□□□□ 0.55
MCF2L-203ENST00000375604 NVLO15381 856 aaKnown RBP18.49■□□□□ 0.55
MCF2L-203ENST00000375604 CHGBP05060 677 aa18.49■□□□□ 0.55
MCF2L-203ENST00000375604 ARHGAP25P42331 645 aa18.49■□□□□ 0.55
MCF2L-203ENST00000375604 GFPT1Q06210 699 aaPredicted RBP18.49■□□□□ 0.55
MCF2L-203ENST00000375604 TWF2Q6IBS0 349 aaKnown RBP18.49■□□□□ 0.55
MCF2L-203ENST00000375604 MB21D1Q8N884 522 aa18.49■□□□□ 0.55
MCF2L-203ENST00000375604 CHD1O14646 1710 aa18.49■□□□□ 0.55
MCF2L-203ENST00000375604 SPATA31A3Q5VYP0 1347 aa18.49■□□□□ 0.55
MCF2L-203ENST00000375604 HECW2Q9P2P5 1572 aa18.49■□□□□ 0.55
MCF2L-203ENST00000375604 ZBTB5O15062 677 aa18.49■□□□□ 0.55
MCF2L-203ENST00000375604 IFNAR1P17181 557 aa18.49■□□□□ 0.55
MCF2L-203ENST00000375604 OSBPL3Q9H4L5 887 aa18.49■□□□□ 0.55
MCF2L-203ENST00000375604 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.49■□□□□ 0.55
MCF2L-203ENST00000375604 ZBBXA8MT70 800 aa18.49■□□□□ 0.55
MCF2L-203ENST00000375604 RASSF2P50749 326 aa18.49■□□□□ 0.55
MCF2L-203ENST00000375604 NDST4Q9H3R1 872 aa18.49■□□□□ 0.55
MCF2L-203ENST00000375604 CLASP1Q7Z460 1538 aa18.49■□□□□ 0.55
MCF2L-203ENST00000375604 SERPING1P05155 500 aa18.49■□□□□ 0.55
MCF2L-203ENST00000375604 ASPHQ12797 758 aa18.49■□□□□ 0.55
MCF2L-203ENST00000375604 STAG2Q8N3U4 1231 aa18.49■□□□□ 0.55
MCF2L-203ENST00000375604 ENAHQ8N8S7 591 aaPredicted RBP18.49■□□□□ 0.55
MCF2L-203ENST00000375604 SPDYE1Q8NFV5 336 aaPredicted RBP18.49■□□□□ 0.55
MCF2L-203ENST00000375604 STAG1Q8WVM7 1258 aa18.49■□□□□ 0.55
MCF2L-203ENST00000375604 LRGUKQ96M69 825 aa18.49■□□□□ 0.55
MCF2L-203ENST00000375604 NGRNQ9NPE2 291 aaKnown RBP18.49■□□□□ 0.55
MCF2L-203ENST00000375604 STXBP2Q15833 593 aa18.49■□□□□ 0.55
MCF2L-203ENST00000375604 ERICH1Q86X53 443 aa18.49■□□□□ 0.55
MCF2L-203ENST00000375604 DACT3Q96B18 629 aaPredicted RBP18.49■□□□□ 0.55
MCF2L-203ENST00000375604 ELP3Q9H9T3 547 aa18.49■□□□□ 0.55
MCF2L-203ENST00000375604 STK17AQ9UEE5 414 aa18.49■□□□□ 0.55
MCF2L-203ENST00000375604 SYCP2LQ5T4T6 812 aa18.48■□□□□ 0.55
MCF2L-203ENST00000375604 SPOPLQ6IQ16 392 aa18.48■□□□□ 0.55
MCF2L-203ENST00000375604 RAB3IPQ96QF0 476 aaPredicted RBP18.48■□□□□ 0.55
MCF2L-203ENST00000375604 THAP9Q9H5L6 903 aa18.48■□□□□ 0.55
MCF2L-203ENST00000375604 PPFIA4O75335 1185 aa18.48■□□□□ 0.55
MCF2L-203ENST00000375604 CYP19A1P11511 503 aaPredicted RBP18.48■□□□□ 0.55
MCF2L-203ENST00000375604 LMBRD2Q68DH5 695 aaPredicted RBP18.48■□□□□ 0.55
MCF2L-203ENST00000375604 TMTC3Q6ZXV5 915 aa18.48■□□□□ 0.55
MCF2L-203ENST00000375604 JPH2Q9BR39 696 aaPredicted RBP18.48■□□□□ 0.55
MCF2L-203ENST00000375604 PI4K2BG5E9Z4 385 aa18.48■□□□□ 0.55
MCF2L-203ENST00000375604 GPC4O75487 556 aa18.48■□□□□ 0.55
MCF2L-203ENST00000375604 PRELPP51888 382 aa18.48■□□□□ 0.55
MCF2L-203ENST00000375604 HDLBPQ00341 1268 aaKnown RBP18.48■□□□□ 0.55
MCF2L-203ENST00000375604 KRT33BQ14525 404 aa18.48■□□□□ 0.55
MCF2L-203ENST00000375604 BBS9Q3SYG4 887 aa18.48■□□□□ 0.55
MCF2L-203ENST00000375604 PRDM15P57071 1507 aaPredicted RBP18.48■□□□□ 0.55
MCF2L-203ENST00000375604 ACSL3O95573 720 aa18.48■□□□□ 0.55
MCF2L-203ENST00000375604 RAB44Q7Z6P3 723 aaPredicted RBP18.48■□□□□ 0.55
MCF2L-203ENST00000375604 CLEC10AQ8IUN9 316 aa18.48■□□□□ 0.55
MCF2L-203ENST00000375604 RPGRIP1Q96KN7 1286 aa18.48■□□□□ 0.55
MCF2L-203ENST00000375604 INTS9Q9NV88 658 aaKnown RBP18.48■□□□□ 0.55
MCF2L-203ENST00000375604 GABBR1Q9UBS5 961 aa18.48■□□□□ 0.55
MCF2L-203ENST00000375604 ADORA2BP29275 332 aa18.48■□□□□ 0.55
MCF2L-203ENST00000375604 NME3Q13232 169 aa18.48■□□□□ 0.55
MCF2L-203ENST00000375604 ZNF568Q3ZCX4 644 aa18.48■□□□□ 0.55
MCF2L-203ENST00000375604 GSPT2Q8IYD1 628 aaKnown RBP18.48■□□□□ 0.55
MCF2L-203ENST00000375604 DCAF4Q8WV16 495 aa18.48■□□□□ 0.55
MCF2L-203ENST00000375604 ATP6V0A4Q9HBG4 840 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms