RNA–Protein interactions for RNA: ENST00000375440.8

CUL4A-202, Transcript of cullin 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL4A, Length 2,364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-202ENST00000375440 SPDYE4A6NLX3 237 aa28.94■■■□□ 2.22
CUL4A-202ENST00000375440 DDX39AO00148 427 aaKnown RBP28.94■■■□□ 2.22
CUL4A-202ENST00000375440 NR3C1P04150 777 aa28.94■■■□□ 2.22
CUL4A-202ENST00000375440 ZNF131P52739 623 aa28.94■■■□□ 2.22
CUL4A-202ENST00000375440 SPA17Q15506 151 aa28.94■■■□□ 2.22
CUL4A-202ENST00000375440 TKFCQ3LXA3 575 aa28.94■■■□□ 2.22
CUL4A-202ENST00000375440 GPIHBP1Q8IV16 184 aa28.94■■■□□ 2.22
CUL4A-202ENST00000375440 BANK1Q8NDB2 785 aa28.94■■■□□ 2.22
CUL4A-202ENST00000375440 GOLGA1Q92805 767 aa28.94■■■□□ 2.22
CUL4A-202ENST00000375440 FIZ1Q96SL8 496 aa28.94■■■□□ 2.22
CUL4A-202ENST00000375440 PARVGQ9HBI0 331 aa28.94■■■□□ 2.22
CUL4A-202ENST00000375440 PKD2L1Q9P0L9 805 aa28.94■■■□□ 2.22
CUL4A-202ENST00000375440 ARMCX3Q9UH62 379 aaPredicted RBP28.94■■■□□ 2.22
CUL4A-202ENST00000375440 ZNF541Q9H0D2 1346 aa28.94■■■□□ 2.22
CUL4A-202ENST00000375440 LOXHD1Q8IVV2 1947 aa28.94■■■□□ 2.22
CUL4A-202ENST00000375440 NMT1P30419 496 aaKnown RBP28.94■■■□□ 2.22
CUL4A-202ENST00000375440 CHMP4BP1P59074 171 aa28.94■■■□□ 2.22
CUL4A-202ENST00000375440 APBA1Q02410 837 aa28.94■■■□□ 2.22
CUL4A-202ENST00000375440 HGSNATQ68CP4 663 aa28.94■■■□□ 2.22
CUL4A-202ENST00000375440 CCDC125Q86Z20 511 aa28.94■■■□□ 2.22
CUL4A-202ENST00000375440 GPR161Q8N6U8 529 aaKnown RBP28.94■■■□□ 2.22
CUL4A-202ENST00000375440 CEP112Q8N8E3 955 aa28.94■■■□□ 2.22
CUL4A-202ENST00000375440 RABGGTAQ92696 567 aa28.94■■■□□ 2.22
CUL4A-202ENST00000375440 ZSWIM4Q9H7M6 989 aa28.94■■■□□ 2.22
CUL4A-202ENST00000375440 PUF60Q9UHX1 559 aaKnown RBP28.94■■■□□ 2.22
CUL4A-202ENST00000375440 ZNF112Q9UJU3 913 aa28.94■■■□□ 2.22
CUL4A-202ENST00000375440 ZMYM2Q9UBW7 1377 aa28.93■■■□□ 2.22
CUL4A-202ENST00000375440 EIF3DO15371 548 aaKnown RBP eCLIP28.93■■■□□ 2.22
CUL4A-202ENST00000375440 TGFB1I1O43294 461 aa28.93■■■□□ 2.22
CUL4A-202ENST00000375440 AKAP3O75969 853 aa28.93■■■□□ 2.22
CUL4A-202ENST00000375440 RPS6P62753 249 aaKnown RBP28.93■■■□□ 2.22
CUL4A-202ENST00000375440 MAP3K20Q9NYL2 800 aaKnown RBP28.93■■■□□ 2.22
CUL4A-202ENST00000375440 KCND2Q9NZV8 630 aa28.93■■■□□ 2.22
CUL4A-202ENST00000375440 USP14P54578 494 aa28.93■■■□□ 2.22
CUL4A-202ENST00000375440 ITGB3BPQ13352 177 aaPredicted RBP28.93■■■□□ 2.22
CUL4A-202ENST00000375440 ASTE1Q2TB18 679 aaPredicted RBP28.93■■■□□ 2.22
CUL4A-202ENST00000375440 DCAF15Q66K64 600 aa28.93■■■□□ 2.22
CUL4A-202ENST00000375440 SCYL3Q8IZE3 742 aa28.93■■■□□ 2.22
CUL4A-202ENST00000375440 EHBP1Q8NDI1 1231 aa28.93■■■□□ 2.22
CUL4A-202ENST00000375440 TAAR1Q96RJ0 339 aa28.93■■■□□ 2.22
CUL4A-202ENST00000375440 ZSCAN20P17040 1043 aaPredicted RBP28.92■■■□□ 2.22
CUL4A-202ENST00000375440 POLR2FP61218 127 aaKnown RBP28.92■■■□□ 2.22
CUL4A-202ENST00000375440 NEK9Q8TD19 979 aa28.92■■■□□ 2.22
CUL4A-202ENST00000375440 SYN2Q92777 582 aaPredicted RBP28.92■■■□□ 2.22
CUL4A-202ENST00000375440 ZKSCAN4Q969J2 545 aaPredicted RBP28.92■■■□□ 2.22
CUL4A-202ENST00000375440 AGO4Q9HCK5 861 aaKnown RBP28.92■■■□□ 2.22
CUL4A-202ENST00000375440 MYO6Q9UM54 1294 aa28.92■■■□□ 2.22
CUL4A-202ENST00000375440 TLR2O60603 784 aa28.91■■■□□ 2.22
CUL4A-202ENST00000375440 R3HDM1Q15032 1099 aaKnown RBP28.91■■■□□ 2.22
CUL4A-202ENST00000375440 ZC2HC1CQ53FD0 456 aaPredicted RBP28.91■■■□□ 2.22
CUL4A-202ENST00000375440 WNK4Q96J92 1243 aa28.91■■■□□ 2.22
CUL4A-202ENST00000375440 IFIH1Q9BYX4 1025 aaKnown RBP28.91■■■□□ 2.22
CUL4A-202ENST00000375440 IKZF4Q9H2S9 585 aa28.91■■■□□ 2.22
CUL4A-202ENST00000375440 JADE2Q9NQC1 790 aa28.91■■■□□ 2.22
CUL4A-202ENST00000375440 PCDHA13Q9Y5I0 950 aa28.91■■■□□ 2.22
CUL4A-202ENST00000375440 MYH11P35749 1972 aa28.91■■■□□ 2.22
CUL4A-202ENST00000375440 RPL13P26373 211 aaKnown RBP28.91■■■□□ 2.22
CUL4A-202ENST00000375440 CASP4P49662 377 aa28.91■■■□□ 2.22
CUL4A-202ENST00000375440 BACE1P56817 501 aa28.91■■■□□ 2.22
CUL4A-202ENST00000375440 KIF5AQ12840 1032 aa28.91■■■□□ 2.22
CUL4A-202ENST00000375440 WHAMMP3Q1A5X7 153 aa28.91■■■□□ 2.22
CUL4A-202ENST00000375440 PRAMEF18Q5VWM3 479 aa28.91■■■□□ 2.22
CUL4A-202ENST00000375440 MIER3Q7Z3K6 550 aa28.91■■■□□ 2.22
CUL4A-202ENST00000375440 SAMD3Q8N6K7 520 aa28.91■■■□□ 2.22
CUL4A-202ENST00000375440 NUCKS1Q9H1E3 243 aaKnown RBP28.91■■■□□ 2.22
CUL4A-202ENST00000375440 GANQ9H2C0 597 aa28.91■■■□□ 2.22
CUL4A-202ENST00000375440 DEF6Q9H4E7 631 aa28.91■■■□□ 2.22
CUL4A-202ENST00000375440 SEL1LQ9UBV2 794 aa28.91■■■□□ 2.22
CUL4A-202ENST00000375440 ODF2LQ9ULJ1 636 aa28.91■■■□□ 2.22
CUL4A-202ENST00000375440 UTRNP46939 3433 aa28.91■■■□□ 2.22
CUL4A-202ENST00000375440 VWA5AO00534 786 aa28.9■■■□□ 2.22
CUL4A-202ENST00000375440 MAPK8IP2Q13387 824 aaPredicted RBP28.9■■■□□ 2.22
CUL4A-202ENST00000375440 TRAPPC11Q7Z392 1133 aa28.9■■■□□ 2.22
CUL4A-202ENST00000375440 ENC1O14682 589 aa28.9■■■□□ 2.22
CUL4A-202ENST00000375440 CLIC2O15247 247 aa28.9■■■□□ 2.22
CUL4A-202ENST00000375440 SLC16A3O15427 465 aaKnown RBP28.9■■■□□ 2.22
CUL4A-202ENST00000375440 AKR1B10O60218 316 aa28.9■■■□□ 2.22
CUL4A-202ENST00000375440 ZBED4O75132 1171 aa28.9■■■□□ 2.22
CUL4A-202ENST00000375440 EIF2AK2P19525 551 aaKnown RBP28.9■■■□□ 2.22
CUL4A-202ENST00000375440 EPS15P42566 896 aa28.9■■■□□ 2.22
CUL4A-202ENST00000375440 DPY19L2P1Q6NXN4 242 aa28.9■■■□□ 2.22
CUL4A-202ENST00000375440 ATG4CQ96DT6 458 aa28.9■■■□□ 2.22
CUL4A-202ENST00000375440 OGFRQ9NZT2 677 aa28.9■■■□□ 2.22
CUL4A-202ENST00000375440 FZD1Q9UP38 647 aa28.9■■■□□ 2.22
CUL4A-202ENST00000375440 RLFQ13129 1914 aa28.9■■■□□ 2.22
CUL4A-202ENST00000375440 SSU72P8A0A1W2PR75 194 aa28.89■■■□□ 2.22
CUL4A-202ENST00000375440 PTPRAP18433 802 aa28.89■■■□□ 2.22
CUL4A-202ENST00000375440 GUCY2CP25092 1073 aa28.89■■■□□ 2.22
CUL4A-202ENST00000375440 CBX1P83916 185 aa28.89■■■□□ 2.22
CUL4A-202ENST00000375440 ANGEL2Q5VTE6 544 aaKnown RBP28.89■■■□□ 2.22
CUL4A-202ENST00000375440 ZNF720Q7Z2F6 126 aa28.89■■■□□ 2.22
CUL4A-202ENST00000375440 TRERF1Q96PN7 1200 aa28.89■■■□□ 2.22
CUL4A-202ENST00000375440 WRNIP1Q96S55 665 aa28.89■■■□□ 2.22
CUL4A-202ENST00000375440 TSGA10Q9BZW7 698 aa28.89■■■□□ 2.22
CUL4A-202ENST00000375440 ATP1A1P05023 1023 aaKnown RBP28.89■■■□□ 2.21
CUL4A-202ENST00000375440 MTMR1Q13613 665 aa28.89■■■□□ 2.21
CUL4A-202ENST00000375440 PGM5Q15124 567 aa28.89■■■□□ 2.21
CUL4A-202ENST00000375440 SFMBT2Q5VUG0 894 aa28.89■■■□□ 2.21
CUL4A-202ENST00000375440 HDAC6Q9UBN7 1215 aa28.89■■■□□ 2.21
CUL4A-202ENST00000375440 ARHGEF35A5YM69 484 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms