RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 KCNQ1P51787 676 aa16.18■□□□□ 0.18
NELFE-201ENST00000375425 MRPS6P82932 125 aaKnown RBP16.18■□□□□ 0.18
NELFE-201ENST00000375425 TMEM62Q0P6H9 643 aa16.18■□□□□ 0.18
NELFE-201ENST00000375425 TOB2Q14106 344 aaPredicted RBP16.18■□□□□ 0.18
NELFE-201ENST00000375425 EPC2Q52LR7 807 aa16.18■□□□□ 0.18
NELFE-201ENST00000375425 RASGRP4Q8TDF6 673 aa16.18■□□□□ 0.18
NELFE-201ENST00000375425 HLA-CQ95604 372 aa16.18■□□□□ 0.18
NELFE-201ENST00000375425 UHRF1Q96T88 793 aaPredicted RBP16.18■□□□□ 0.18
NELFE-201ENST00000375425 ZNF577Q9BSK1 485 aa16.18■□□□□ 0.18
NELFE-201ENST00000375425 AGO3Q9H9G7 860 aaKnown RBP16.18■□□□□ 0.18
NELFE-201ENST00000375425 HBP1O60381 514 aa16.17■□□□□ 0.18
NELFE-201ENST00000375425 KLRC1P26715 233 aa16.17■□□□□ 0.18
NELFE-201ENST00000375425 PRR16Q569H4 304 aa16.17■□□□□ 0.18
NELFE-201ENST00000375425 FAM160B1Q5W0V3 765 aa16.17■□□□□ 0.18
NELFE-201ENST00000375425 SWSAP1Q6NVH7 229 aa16.17■□□□□ 0.18
NELFE-201ENST00000375425 MTHFD1LQ6UB35 978 aa16.17■□□□□ 0.18
NELFE-201ENST00000375425 TSHZ1Q6ZSZ6 1077 aa16.17■□□□□ 0.18
NELFE-201ENST00000375425 CCDC60Q8IWA6 550 aaPredicted RBP16.17■□□□□ 0.18
NELFE-201ENST00000375425 BICD2Q8TD16 824 aa16.17■□□□□ 0.18
NELFE-201ENST00000375425 IL17RAQ96F46 866 aa16.17■□□□□ 0.18
NELFE-201ENST00000375425 TBC1D22BQ9NU19 505 aa16.17■□□□□ 0.18
NELFE-201ENST00000375425 VPS54Q9P1Q0 977 aa16.17■□□□□ 0.18
NELFE-201ENST00000375425 CYP46A1Q9Y6A2 500 aa16.17■□□□□ 0.18
NELFE-201ENST00000375425 M0QZ92 97 aa16.16■□□□□ 0.18
NELFE-201ENST00000375425 ATP4AP20648 1035 aa16.16■□□□□ 0.18
NELFE-201ENST00000375425 CD52P31358 61 aa16.16■□□□□ 0.18
NELFE-201ENST00000375425 SETQ01105 290 aaPredicted RBP16.16■□□□□ 0.18
NELFE-201ENST00000375425 MIS18BP1Q6P0N0 1132 aa16.16■□□□□ 0.18
NELFE-201ENST00000375425 PDXDC2PQ6P474 469 aa16.16■□□□□ 0.18
NELFE-201ENST00000375425 TMEM192Q8IY95 271 aa16.16■□□□□ 0.18
NELFE-201ENST00000375425 NME8Q8N427 588 aa16.16■□□□□ 0.18
NELFE-201ENST00000375425 CCDC148Q8NFR7 591 aa16.16■□□□□ 0.18
NELFE-201ENST00000375425 ATP8B4Q8TF62 1192 aa16.16■□□□□ 0.18
NELFE-201ENST00000375425 SAMD11Q96NU1 681 aa16.16■□□□□ 0.18
NELFE-201ENST00000375425 LARP6Q9BRS8 491 aaKnown RBP16.16■□□□□ 0.18
NELFE-201ENST00000375425 ZNF302Q9NR11 478 aa16.16■□□□□ 0.18
NELFE-201ENST00000375425 MICAL3Q7RTP6 2002 aa16.16■□□□□ 0.18
NELFE-201ENST00000375425 SMIM35A0A1B0GVV1 85 aa16.15■□□□□ 0.18
NELFE-201ENST00000375425 NEFLP07196 543 aa16.15■□□□□ 0.18
NELFE-201ENST00000375425 CIITAP33076 1130 aa16.15■□□□□ 0.18
NELFE-201ENST00000375425 ZNF746Q6NUN9 644 aaPredicted RBP16.15■□□□□ 0.18
NELFE-201ENST00000375425 RTN4RL1Q86UN2 441 aaPredicted RBP16.15■□□□□ 0.18
NELFE-201ENST00000375425 FIBCD1Q8N539 461 aa16.15■□□□□ 0.18
NELFE-201ENST00000375425 CELF4Q9BZC1 486 aaKnown RBP16.15■□□□□ 0.18
NELFE-201ENST00000375425 TM6SF1Q9BZW5 370 aa16.15■□□□□ 0.18
NELFE-201ENST00000375425 TRPV2Q9Y5S1 764 aa16.15■□□□□ 0.18
NELFE-201ENST00000375425 SQORQ9Y6N5 450 aa16.15■□□□□ 0.18
NELFE-201ENST00000375425 H3BNC9 293 aa16.14■□□□□ 0.17
NELFE-201ENST00000375425 EDIL3O43854 480 aa16.14■□□□□ 0.17
NELFE-201ENST00000375425 NLRP5P59047 1200 aa16.14■□□□□ 0.17
NELFE-201ENST00000375425 SSRP1Q08945 709 aaKnown RBP16.14■□□□□ 0.17
NELFE-201ENST00000375425 GPM6BQ13491 265 aa16.14■□□□□ 0.17
NELFE-201ENST00000375425 TRMT1LQ7Z2T5 733 aaKnown RBP16.14■□□□□ 0.17
NELFE-201ENST00000375425 TRIM22Q8IYM9 498 aa16.14■□□□□ 0.17
NELFE-201ENST00000375425 ZNF274Q96GC6 653 aaPredicted RBP16.14■□□□□ 0.17
NELFE-201ENST00000375425 NECAB3Q96P71 396 aaPredicted RBP16.14■□□□□ 0.17
NELFE-201ENST00000375425 UPF3BQ9BZI7 483 aaKnown RBP16.14■□□□□ 0.17
NELFE-201ENST00000375425 SH3GLB2Q9NR46 395 aa16.14■□□□□ 0.17
NELFE-201ENST00000375425 PADI3Q9ULW8 664 aa16.14■□□□□ 0.17
NELFE-201ENST00000375425 PCDHA10Q9Y5I2 948 aa16.14■□□□□ 0.17
NELFE-201ENST00000375425 IGSF9BQ9UPX0 1349 aa16.13■□□□□ 0.17
NELFE-201ENST00000375425 ZBTB42B2RXF5 422 aa16.13■□□□□ 0.17
NELFE-201ENST00000375425 KRT76Q01546 638 aa16.13■□□□□ 0.17
NELFE-201ENST00000375425 PTPROQ16827 1216 aa16.13■□□□□ 0.17
NELFE-201ENST00000375425 ZNF484Q5JVG2 852 aa16.13■□□□□ 0.17
NELFE-201ENST00000375425 CKAP2LQ8IYA6 745 aa16.13■□□□□ 0.17
NELFE-201ENST00000375425 SMAP1Q8IYB5 467 aaPredicted RBP16.13■□□□□ 0.17
NELFE-201ENST00000375425 KIAA0319LQ8IZA0 1049 aa16.13■□□□□ 0.17
NELFE-201ENST00000375425 LINC01599Q8WXQ3 324 aa16.13■□□□□ 0.17
NELFE-201ENST00000375425 LENG9Q96B70 501 aa16.13■□□□□ 0.17
NELFE-201ENST00000375425 MRPL38Q96DV4 380 aaKnown RBP16.13■□□□□ 0.17
NELFE-201ENST00000375425 FTHL17Q9BXU8 183 aa16.13■□□□□ 0.17
NELFE-201ENST00000375425 GINS2Q9Y248 185 aa16.13■□□□□ 0.17
NELFE-201ENST00000375425 MAFBQ9Y5Q3 323 aaPredicted RBP16.13■□□□□ 0.17
NELFE-201ENST00000375425 KDM3AQ9Y4C1 1321 aa16.13■□□□□ 0.17
NELFE-201ENST00000375425 CPLX1O14810 134 aa16.12■□□□□ 0.17
NELFE-201ENST00000375425 PSAPP07602 524 aa16.12■□□□□ 0.17
NELFE-201ENST00000375425 USP11P51784 963 aa16.12■□□□□ 0.17
NELFE-201ENST00000375425 PAK2Q13177 524 aa16.12■□□□□ 0.17
NELFE-201ENST00000375425 BBXQ8WY36 941 aaPredicted RBP16.12■□□□□ 0.17
NELFE-201ENST00000375425 ZNF689Q96CS4 500 aaPredicted RBP16.12■□□□□ 0.17
NELFE-201ENST00000375425 CDHR5Q9HBB8 845 aa16.12■□□□□ 0.17
NELFE-201ENST00000375425 RC3H2Q9HBD1 1191 aaKnown RBP16.12■□□□□ 0.17
NELFE-201ENST00000375425 TCEAL9Q9UHQ7 104 aa16.12■□□□□ 0.17
NELFE-201ENST00000375425 SAMM50Q9Y512 469 aa16.12■□□□□ 0.17
NELFE-201ENST00000375425 COL1A2P08123 1366 aa16.12■□□□□ 0.17
NELFE-201ENST00000375425 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.11■□□□□ 0.17
NELFE-201ENST00000375425 MSH4O15457 936 aa16.11■□□□□ 0.17
NELFE-201ENST00000375425 DGKIO75912 1065 aa16.11■□□□□ 0.17
NELFE-201ENST00000375425 CTNNB1P35222 781 aa16.11■□□□□ 0.17
NELFE-201ENST00000375425 BMPR1AP36894 532 aa16.11■□□□□ 0.17
NELFE-201ENST00000375425 NFX1Q12986 1120 aaKnown RBP16.11■□□□□ 0.17
NELFE-201ENST00000375425 STK3Q13188 491 aa16.11■□□□□ 0.17
NELFE-201ENST00000375425 BTG3Q14201 252 aaPredicted RBP16.11■□□□□ 0.17
NELFE-201ENST00000375425 TMEM266Q2M3C6 531 aa16.11■□□□□ 0.17
NELFE-201ENST00000375425 CRIPAKQ8N1N5 446 aa16.11■□□□□ 0.17
NELFE-201ENST00000375425 PDRG1Q9NUG6 133 aa16.11■□□□□ 0.17
NELFE-201ENST00000375425 GABBR1Q9UBS5 961 aa16.11■□□□□ 0.17
NELFE-201ENST00000375425 ADGRA3Q8IWK6 1321 aa16.11■□□□□ 0.17
NELFE-201ENST00000375425 C5orf67F2Z3F1 127 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms