RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 MAP7D3Q8IWC1 876 aa17.15■□□□□ 0.34
COL17A1-202ENST00000369733 NOA1Q8NC60 698 aaKnown RBP17.15■□□□□ 0.34
COL17A1-202ENST00000369733 SLC17A8Q8NDX2 589 aa17.15■□□□□ 0.34
COL17A1-202ENST00000369733 ENGASEQ8NFI3 743 aa17.15■□□□□ 0.34
COL17A1-202ENST00000369733 LRGUKQ96M69 825 aa17.15■□□□□ 0.34
COL17A1-202ENST00000369733 ANKFY1Q9P2R3 1169 aa17.15■□□□□ 0.34
COL17A1-202ENST00000369733 SPHKAPQ2M3C7 1700 aa17.15■□□□□ 0.34
COL17A1-202ENST00000369733 TRPA1O75762 1119 aa17.15■□□□□ 0.34
COL17A1-202ENST00000369733 IRAK1P51617 712 aa17.15■□□□□ 0.34
COL17A1-202ENST00000369733 TXNRD1Q16881 649 aa17.15■□□□□ 0.34
COL17A1-202ENST00000369733 SAYSD1Q9NPB0 183 aa17.15■□□□□ 0.34
COL17A1-202ENST00000369733 TMOD4Q9NZQ9 345 aa17.15■□□□□ 0.34
COL17A1-202ENST00000369733 STOML1Q9UBI4 398 aa17.15■□□□□ 0.34
COL17A1-202ENST00000369733 ZNF211Q13398 564 aaPredicted RBP17.14■□□□□ 0.34
COL17A1-202ENST00000369733 MTA3Q9BTC8 594 aa17.14■□□□□ 0.34
COL17A1-202ENST00000369733 ZFP69BQ9UJL9 534 aa17.14■□□□□ 0.34
COL17A1-202ENST00000369733 GINS2Q9Y248 185 aa17.14■□□□□ 0.34
COL17A1-202ENST00000369733 CPP00450 1065 aa17.14■□□□□ 0.33
COL17A1-202ENST00000369733 MS4A14Q96JA4 679 aa17.14■□□□□ 0.33
COL17A1-202ENST00000369733 FUT8Q9BYC5 575 aa17.14■□□□□ 0.33
COL17A1-202ENST00000369733 ETNK1Q9HBU6 452 aa17.14■□□□□ 0.33
COL17A1-202ENST00000369733 TOM1L1O75674 476 aa17.14■□□□□ 0.33
COL17A1-202ENST00000369733 LRRC14Q15048 493 aa17.14■□□□□ 0.33
COL17A1-202ENST00000369733 ALX1Q15699 326 aa17.14■□□□□ 0.33
COL17A1-202ENST00000369733 PYROXD1Q8WU10 500 aa17.14■□□□□ 0.33
COL17A1-202ENST00000369733 TGS1Q96RS0 853 aaKnown RBP17.14■□□□□ 0.33
COL17A1-202ENST00000369733 TRIM55Q9BYV6 548 aa17.14■□□□□ 0.33
COL17A1-202ENST00000369733 MCF2LO15068 1137 aa17.14■□□□□ 0.33
COL17A1-202ENST00000369733 YARSP54577 528 aaKnown RBP17.14■□□□□ 0.33
COL17A1-202ENST00000369733 COASYQ13057 564 aa17.14■□□□□ 0.33
COL17A1-202ENST00000369733 BBS9Q3SYG4 887 aa17.14■□□□□ 0.33
COL17A1-202ENST00000369733 SUFUQ9UMX1 484 aa17.14■□□□□ 0.33
COL17A1-202ENST00000369733 ERBB3P21860 1342 aa17.14■□□□□ 0.33
COL17A1-202ENST00000369733 ABCA6Q8N139 1617 aa17.14■□□□□ 0.33
COL17A1-202ENST00000369733 EIF4E1BA6NMX2 242 aaKnown RBP17.14■□□□□ 0.33
COL17A1-202ENST00000369733 SPECC1L-ADORA2AF8WAN1 911 aa17.14■□□□□ 0.33
COL17A1-202ENST00000369733 DPYDQ12882 1025 aa17.14■□□□□ 0.33
COL17A1-202ENST00000369733 CDC37Q16543 378 aaPredicted RBP17.14■□□□□ 0.33
COL17A1-202ENST00000369733 STAG2Q8N3U4 1231 aa17.14■□□□□ 0.33
COL17A1-202ENST00000369733 JDP2Q8WYK2 163 aa17.14■□□□□ 0.33
COL17A1-202ENST00000369733 FAM81BQ96LP2 452 aa17.14■□□□□ 0.33
COL17A1-202ENST00000369733 MIS12Q9H081 205 aa17.14■□□□□ 0.33
COL17A1-202ENST00000369733 FGFR1OP2Q9NVK5 253 aa17.14■□□□□ 0.33
COL17A1-202ENST00000369733 PSMD14O00487 310 aa17.13■□□□□ 0.33
COL17A1-202ENST00000369733 LRRC37BQ96QE4 947 aa17.13■□□□□ 0.33
COL17A1-202ENST00000369733 EPS15L1Q9UBC2 864 aa17.13■□□□□ 0.33
COL17A1-202ENST00000369733 CROCC2H7BZ55 1655 aa17.13■□□□□ 0.33
COL17A1-202ENST00000369733 TMEM191BP0C7N4 346 aa17.13■□□□□ 0.33
COL17A1-202ENST00000369733 IQANK1A0A1B0GTG1 560 aa17.13■□□□□ 0.33
COL17A1-202ENST00000369733 SORBS3O60504 671 aa17.13■□□□□ 0.33
COL17A1-202ENST00000369733 BRAFP15056 766 aa17.13■□□□□ 0.33
COL17A1-202ENST00000369733 CRKLP46109 303 aaKnown RBP17.13■□□□□ 0.33
COL17A1-202ENST00000369733 ANKRD40Q6AI12 368 aa17.13■□□□□ 0.33
COL17A1-202ENST00000369733 ARMC2Q8NEN0 867 aa17.13■□□□□ 0.33
COL17A1-202ENST00000369733 WDR11Q9BZH6 1224 aa17.13■□□□□ 0.33
COL17A1-202ENST00000369733 TAF6LQ9Y6J9 622 aa17.13■□□□□ 0.33
COL17A1-202ENST00000369733 FAM187AA6NFU0 413 aa17.13■□□□□ 0.33
COL17A1-202ENST00000369733 TMED1Q13445 227 aa17.13■□□□□ 0.33
COL17A1-202ENST00000369733 KCNB1Q14721 858 aa17.13■□□□□ 0.33
COL17A1-202ENST00000369733 PIP4K2CQ8TBX8 421 aa17.13■□□□□ 0.33
COL17A1-202ENST00000369733 NRKQ7Z2Y5 1582 aa17.13■□□□□ 0.33
COL17A1-202ENST00000369733 LRRIQ4A6NIV6 560 aa17.12■□□□□ 0.33
COL17A1-202ENST00000369733 FCER1AP12319 257 aa17.12■□□□□ 0.33
COL17A1-202ENST00000369733 SEMA3FQ13275 785 aa17.12■□□□□ 0.33
COL17A1-202ENST00000369733 DNAJC24Q6P3W2 148 aa17.12■□□□□ 0.33
COL17A1-202ENST00000369733 CCDC17Q96LX7 622 aa17.12■□□□□ 0.33
COL17A1-202ENST00000369733 PNKPQ96T60 521 aa17.12■□□□□ 0.33
COL17A1-202ENST00000369733 BHMT2Q9H2M3 363 aa17.12■□□□□ 0.33
COL17A1-202ENST00000369733 GINM1Q9NU53 330 aa17.12■□□□□ 0.33
COL17A1-202ENST00000369733 AMACRQ9UHK6 382 aa17.12■□□□□ 0.33
COL17A1-202ENST00000369733 CPDO75976 1380 aa17.12■□□□□ 0.33
COL17A1-202ENST00000369733 SPAG7O75391 227 aa17.12■□□□□ 0.33
COL17A1-202ENST00000369733 LSP1P33241 339 aa17.12■□□□□ 0.33
COL17A1-202ENST00000369733 PPP1R2P3Q6NXS1 205 aa17.12■□□□□ 0.33
COL17A1-202ENST00000369733 ZBTB8OSQ8IWT0 167 aa17.12■□□□□ 0.33
COL17A1-202ENST00000369733 OSBPL1AQ9BXW6 950 aa17.12■□□□□ 0.33
COL17A1-202ENST00000369733 AFG3L2Q9Y4W6 797 aa17.12■□□□□ 0.33
COL17A1-202ENST00000369733 CRB1P82279 1406 aa17.12■□□□□ 0.33
COL17A1-202ENST00000369733 PNMA6FA0A0J9YX94 578 aa17.12■□□□□ 0.33
COL17A1-202ENST00000369733 GYPCP04921 128 aa17.12■□□□□ 0.33
COL17A1-202ENST00000369733 CHRNA3P32297 505 aa17.12■□□□□ 0.33
COL17A1-202ENST00000369733 ATG16L1Q676U5 607 aa17.12■□□□□ 0.33
COL17A1-202ENST00000369733 MCF2L2Q86YR7 1114 aa17.12■□□□□ 0.33
COL17A1-202ENST00000369733 SH3BP5O60239 455 aa17.12■□□□□ 0.33
COL17A1-202ENST00000369733 NMT2O60551 498 aa17.12■□□□□ 0.33
COL17A1-202ENST00000369733 CTDNEP1O95476 244 aa17.12■□□□□ 0.33
COL17A1-202ENST00000369733 ELF1P32519 619 aa17.12■□□□□ 0.33
COL17A1-202ENST00000369733 GPC5P78333 572 aa17.12■□□□□ 0.33
COL17A1-202ENST00000369733 NR1H3Q13133 447 aa17.12■□□□□ 0.33
COL17A1-202ENST00000369733 ABCB5Q2M3G0 1257 aa17.12■□□□□ 0.33
COL17A1-202ENST00000369733 GNPTABQ3T906 1256 aa17.12■□□□□ 0.33
COL17A1-202ENST00000369733 LRIG3Q6UXM1 1119 aa17.12■□□□□ 0.33
COL17A1-202ENST00000369733 ARHGEF40Q8TER5 1519 aa17.12■□□□□ 0.33
COL17A1-202ENST00000369733 GOLGA8SH3BPF8 625 aa17.11■□□□□ 0.33
COL17A1-202ENST00000369733 GPC4O75487 556 aa17.11■□□□□ 0.33
COL17A1-202ENST00000369733 NR3C1P04150 777 aa17.11■□□□□ 0.33
COL17A1-202ENST00000369733 RAD23BP54727 409 aa17.11■□□□□ 0.33
COL17A1-202ENST00000369733 ESRRGP62508 458 aa17.11■□□□□ 0.33
COL17A1-202ENST00000369733 GUF1Q8N442 669 aaKnown RBP17.11■□□□□ 0.33
COL17A1-202ENST00000369733 PDZD8Q8NEN9 1154 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms