RNA–Protein interactions for RNA: ENST00000359353.9

DDX42-201, Transcript of DEAD-box helicase 42, humanhuman

TSL 5 BASIC

Gene DDX42, Length 2,783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-201ENST00000359353 CD302Q8IX05 232 aa26.31■■□□□ 1.8
DDX42-201ENST00000359353 LRRC57Q8N9N7 239 aa26.31■■□□□ 1.8
DDX42-201ENST00000359353 CNTNAP4Q9C0A0 1308 aa26.31■■□□□ 1.8
DDX42-201ENST00000359353 AKAP3O75969 853 aa26.3■■□□□ 1.8
DDX42-201ENST00000359353 DPY19L2P1Q6NXN4 242 aa26.3■■□□□ 1.8
DDX42-201ENST00000359353 PEX26Q7Z412 305 aa26.3■■□□□ 1.8
DDX42-201ENST00000359353 SCFD2Q8WU76 684 aa26.3■■□□□ 1.8
DDX42-201ENST00000359353 TRIM51Q9BSJ1 452 aa26.3■■□□□ 1.8
DDX42-201ENST00000359353 OSGEPQ9NPF4 335 aa26.3■■□□□ 1.8
DDX42-201ENST00000359353 THRAP3Q9Y2W1 955 aaKnown RBP26.3■■□□□ 1.8
DDX42-201ENST00000359353 DAGLAQ9Y4D2 1042 aa26.3■■□□□ 1.8
DDX42-201ENST00000359353 HMGB1P1B2RPK0 211 aaPredicted RBP26.3■■□□□ 1.8
DDX42-201ENST00000359353 PDE4CQ08493 712 aa26.3■■□□□ 1.8
DDX42-201ENST00000359353 SF3B2Q13435 895 aaKnown RBP26.3■■□□□ 1.8
DDX42-201ENST00000359353 U2AF1L4Q8WU68 220 aaKnown RBP26.3■■□□□ 1.8
DDX42-201ENST00000359353 NT5C3AQ9H0P0 336 aa26.3■■□□□ 1.8
DDX42-201ENST00000359353 NOVA2Q9UNW9 492 aaKnown RBP26.3■■□□□ 1.8
DDX42-201ENST00000359353 PCDHB13Q9Y5F0 798 aa26.3■■□□□ 1.8
DDX42-201ENST00000359353 H0YGN5 161 aa26.29■■□□□ 1.8
DDX42-201ENST00000359353 RIMBP2O15034 1052 aa26.29■■□□□ 1.8
DDX42-201ENST00000359353 GNA14O95837 355 aa26.29■■□□□ 1.8
DDX42-201ENST00000359353 GTF2IP78347 998 aa26.29■■□□□ 1.8
DDX42-201ENST00000359353 DAAM2Q86T65 1068 aa26.29■■□□□ 1.8
DDX42-201ENST00000359353 TPCN2Q8NHX9 752 aa26.29■■□□□ 1.8
DDX42-201ENST00000359353 NFS1Q9Y697 457 aa26.29■■□□□ 1.8
DDX42-201ENST00000359353 GFPT2O94808 682 aa26.29■■□□□ 1.8
DDX42-201ENST00000359353 MRPL12P52815 198 aaKnown RBP26.29■■□□□ 1.8
DDX42-201ENST00000359353 PRPF4BQ13523 1007 aaKnown RBP26.29■■□□□ 1.8
DDX42-201ENST00000359353 PRR16Q569H4 304 aa26.29■■□□□ 1.8
DDX42-201ENST00000359353 CNPY4Q8N129 248 aa26.29■■□□□ 1.8
DDX42-201ENST00000359353 P2RX7Q99572 595 aaKnown RBP26.29■■□□□ 1.8
DDX42-201ENST00000359353 REEP2Q9BRK0 252 aa26.29■■□□□ 1.8
DDX42-201ENST00000359353 DHX36Q9H2U1 1008 aaKnown RBP26.29■■□□□ 1.8
DDX42-201ENST00000359353 PLCB1Q9NQ66 1216 aa26.29■■□□□ 1.8
DDX42-201ENST00000359353 PGRMC1O00264 195 aaKnown RBP26.29■■□□□ 1.8
DDX42-201ENST00000359353 IRX3P78415 501 aaPredicted RBP26.29■■□□□ 1.8
DDX42-201ENST00000359353 CATSPER3Q86XQ3 398 aa26.29■■□□□ 1.8
DDX42-201ENST00000359353 PRPF38AQ8NAV1 312 aaKnown RBP26.29■■□□□ 1.8
DDX42-201ENST00000359353 CYFIP2Q96F07 1278 aa26.29■■□□□ 1.8
DDX42-201ENST00000359353 BCS1LQ9Y276 419 aa26.29■■□□□ 1.8
DDX42-201ENST00000359353 AFPP02771 609 aaKnown RBP26.28■■□□□ 1.8
DDX42-201ENST00000359353 ABCB4P21439 1286 aa26.28■■□□□ 1.8
DDX42-201ENST00000359353 POLD1P28340 1107 aa26.28■■□□□ 1.8
DDX42-201ENST00000359353 SLC12A3P55017 1021 aa26.28■■□□□ 1.8
DDX42-201ENST00000359353 CNBD1Q8NA66 436 aa26.28■■□□□ 1.8
DDX42-201ENST00000359353 TTLL1O95922 423 aa26.28■■□□□ 1.8
DDX42-201ENST00000359353 MARSP56192 900 aaKnown RBP26.28■■□□□ 1.8
DDX42-201ENST00000359353 KSR1Q8IVT5 923 aa26.28■■□□□ 1.8
DDX42-201ENST00000359353 CD248Q9HCU0 757 aa26.28■■□□□ 1.8
DDX42-201ENST00000359353 CCNL1Q9UK58 526 aaPredicted RBP26.28■■□□□ 1.8
DDX42-201ENST00000359353 C6orf229H3BNL8 230 aa26.27■■□□□ 1.8
DDX42-201ENST00000359353 SNHG28P0DPA3 235 aa26.27■■□□□ 1.8
DDX42-201ENST00000359353 XRCC5P13010 732 aaKnown RBP26.27■■□□□ 1.8
DDX42-201ENST00000359353 NT5C2P49902 561 aa26.27■■□□□ 1.8
DDX42-201ENST00000359353 SCNN1DP51172 638 aa26.27■■□□□ 1.8
DDX42-201ENST00000359353 KDM3AQ9Y4C1 1321 aa26.27■■□□□ 1.8
DDX42-201ENST00000359353 hCG_1984214I3L0E3 225 aa26.27■■□□□ 1.8
DDX42-201ENST00000359353 ZBTB5O15062 677 aa26.27■■□□□ 1.8
DDX42-201ENST00000359353 ZNF713Q8N859 430 aaPredicted RBP26.27■■□□□ 1.8
DDX42-201ENST00000359353 RPGRQ92834 1020 aaKnown RBP26.27■■□□□ 1.8
DDX42-201ENST00000359353 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.27■■□□□ 1.84e-8■□□□□ 10.6
DDX42-201ENST00000359353 GCNT4Q9P109 453 aa26.27■■□□□ 1.8
DDX42-201ENST00000359353 POLLQ9UGP5 575 aa26.27■■□□□ 1.8
DDX42-201ENST00000359353 EP400Q96L91 3159 aa26.27■■□□□ 1.8
DDX42-201ENST00000359353 FAM107AO95990 144 aa26.26■■□□□ 1.79
DDX42-201ENST00000359353 NOVP48745 357 aa26.26■■□□□ 1.79
DDX42-201ENST00000359353 GIT2Q14161 759 aa26.26■■□□□ 1.79
DDX42-201ENST00000359353 MDM1Q8TC05 714 aa26.26■■□□□ 1.79
DDX42-201ENST00000359353 DDX3XO00571 662 aaKnown RBP eCLIP26.26■■□□□ 1.796e-8■□□□□ 9.5
DDX42-201ENST00000359353 PLCG2P16885 1265 aa26.26■■□□□ 1.79
DDX42-201ENST00000359353 MAGOHP61326 146 aaKnown RBP26.26■■□□□ 1.79
DDX42-201ENST00000359353 SEPT2Q15019 361 aa26.26■■□□□ 1.79
DDX42-201ENST00000359353 MAGOHBQ96A72 148 aaKnown RBP26.26■■□□□ 1.79
DDX42-201ENST00000359353 GGA1Q9UJY5 639 aa26.26■■□□□ 1.79
DDX42-201ENST00000359353 PCDHA1Q9Y5I3 950 aa26.26■■□□□ 1.79
DDX42-201ENST00000359353 TULP1O00294 542 aaPredicted RBP26.25■■□□□ 1.79
DDX42-201ENST00000359353 DHX9Q08211 1270 aaKnown RBP26.25■■□□□ 1.79
DDX42-201ENST00000359353 QRICH1Q2TAL8 776 aa26.25■■□□□ 1.79
DDX42-201ENST00000359353 ANO3Q9BYT9 981 aa26.25■■□□□ 1.79
DDX42-201ENST00000359353 ZBTB48P10074 688 aaPredicted RBP26.25■■□□□ 1.79
DDX42-201ENST00000359353 ZNF211Q13398 564 aaPredicted RBP26.25■■□□□ 1.79
DDX42-201ENST00000359353 KNOP1Q1ED39 458 aaKnown RBP26.25■■□□□ 1.79
DDX42-201ENST00000359353 KRT71Q3SY84 523 aa26.25■■□□□ 1.79
DDX42-201ENST00000359353 JPH2Q9BR39 696 aaPredicted RBP26.25■■□□□ 1.79
DDX42-201ENST00000359353 ATP8A1Q9Y2Q0 1164 aa26.25■■□□□ 1.79
DDX42-201ENST00000359353 A6NNZ2 444 aa26.24■■□□□ 1.79
DDX42-201ENST00000359353 GABPAQ06546 454 aa26.24■■□□□ 1.79
DDX42-201ENST00000359353 TUBB8Q3ZCM7 444 aa26.24■■□□□ 1.79
DDX42-201ENST00000359353 CCDC13Q8IYE1 715 aa26.24■■□□□ 1.79
DDX42-201ENST00000359353 ACTRT1Q8TDG2 376 aa26.24■■□□□ 1.79
DDX42-201ENST00000359353 PBKQ96KB5 322 aa26.24■■□□□ 1.79
DDX42-201ENST00000359353 SLC12A6Q9UHW9 1150 aa26.24■■□□□ 1.79
DDX42-201ENST00000359353 IGSF9BQ9UPX0 1349 aa26.24■■□□□ 1.79
DDX42-201ENST00000359353 SMIM23A6NLE4 172 aa26.24■■□□□ 1.79
DDX42-201ENST00000359353 PHF20L1A8MW92 1017 aa26.24■■□□□ 1.79
DDX42-201ENST00000359353 FSBPO95073 299 aa26.24■■□□□ 1.79
DDX42-201ENST00000359353 GCNT3O95395 438 aa26.24■■□□□ 1.79
DDX42-201ENST00000359353 FGGP02679 453 aa26.24■■□□□ 1.79
DDX42-201ENST00000359353 USH1GQ495M9 461 aa26.24■■□□□ 1.79
DDX42-201ENST00000359353 HYIQ5T013 277 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms