RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 PCDHA12Q9UN75 941 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 CCDC195A0A1B0GUA6 201 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 MED7O43513 233 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 CPA1P15085 419 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 EIF2AK2P19525 551 aaKnown RBP6.22□□□□□ -1.41
BRCA1-203ENST00000357654 DDIASQ8IXT1 998 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 MEIS3Q99687 375 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 RUBCNLQ9H714 662 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 TJP2Q9UDY2 1190 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 ATP11BQ9Y2G3 1177 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 PCDHB7Q9Y5E2 793 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 H0YCG3 227 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 STXBP3O00186 592 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 RASGRF2O14827 1237 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 HNRNPCP07910 306 aaKnown RBP eCLIP6.22□□□□□ -1.41
BRCA1-203ENST00000357654 ENO2P09104 434 aaPredicted RBP6.22□□□□□ -1.41
BRCA1-203ENST00000357654 TAC1P20366 129 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 HPCAP84074 193 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 KIZQ2M2Z5 673 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 CYP4F22Q6NT55 531 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 HDXQ7Z353 690 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 MAGED4Q96JG8 741 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 SLF1Q9BQI6 1058 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 KLC2Q9H0B6 622 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 MIR1-1HGQ9H1L0 117 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 AIPL1Q9NZN9 384 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.22□□□□□ -1.41
BRCA1-203ENST00000357654 ZNF532Q9HCE3 1301 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 SAMD9Q5K651 1589 aa6.21□□□□□ -1.41
BRCA1-203ENST00000357654 KRT33AO76009 404 aa6.21□□□□□ -1.41
BRCA1-203ENST00000357654 LRG1P02750 347 aa6.21□□□□□ -1.41
BRCA1-203ENST00000357654 PDIA3P30101 505 aaKnown RBP6.21□□□□□ -1.41
BRCA1-203ENST00000357654 ARHGEF7Q14155 803 aa6.21□□□□□ -1.41
BRCA1-203ENST00000357654 BBS9Q3SYG4 887 aa6.21□□□□□ -1.41
BRCA1-203ENST00000357654 COBLL1Q53SF7 1204 aa6.21□□□□□ -1.41
BRCA1-203ENST00000357654 PDXDC1Q6P996 788 aa6.21□□□□□ -1.41
BRCA1-203ENST00000357654 TRIM69Q86WT6 500 aa6.21□□□□□ -1.41
BRCA1-203ENST00000357654 CLYBLQ8N0X4 340 aa6.21□□□□□ -1.41
BRCA1-203ENST00000357654 KRT78Q8N1N4 520 aa6.21□□□□□ -1.41
BRCA1-203ENST00000357654 DHX38Q92620 1227 aaKnown RBP6.21□□□□□ -1.41
BRCA1-203ENST00000357654 PPP1R13BQ96KQ4 1090 aa6.21□□□□□ -1.41
BRCA1-203ENST00000357654 PNKPQ96T60 521 aa6.21□□□□□ -1.41
BRCA1-203ENST00000357654 RUVBL2Q9Y230 463 aaKnown RBP6.21□□□□□ -1.41
BRCA1-203ENST00000357654 KDM3AQ9Y4C1 1321 aa6.21□□□□□ -1.41
BRCA1-203ENST00000357654 AKNAQ7Z591 1439 aa6.21□□□□□ -1.41
BRCA1-203ENST00000357654 FAM135AQ9P2D6 1515 aa6.21□□□□□ -1.41
BRCA1-203ENST00000357654 HSPA8P11142 646 aaKnown RBP6.21□□□□□ -1.42
BRCA1-203ENST00000357654 HPGDP15428 266 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 KCNA2P16389 499 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 GTF2E2P29084 291 aaKnown RBP6.21□□□□□ -1.42
BRCA1-203ENST00000357654 MAPK4P31152 587 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 PAPOLAP51003 745 aaKnown RBP6.21□□□□□ -1.42
BRCA1-203ENST00000357654 AP1B1Q10567 949 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 CREB3L3Q68CJ9 461 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 RHPN2Q8IUC4 686 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 DIS3LQ8TF46 1054 aaKnown RBP6.21□□□□□ -1.42
BRCA1-203ENST00000357654 MAML1Q92585 1016 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 TXLNGQ9NUQ3 528 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 AKAP7Q9P0M2 348 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-203ENST00000357654 H2AFY2Q9P0M6 372 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-203ENST00000357654 WARS2Q9UGM6 360 aaKnown RBP6.21□□□□□ -1.42
BRCA1-203ENST00000357654 GGT7Q9UJ14 662 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 DBNLQ9UJU6 430 aaKnown RBP6.21□□□□□ -1.42
BRCA1-203ENST00000357654 LSM7Q9UK45 103 aaKnown RBP6.21□□□□□ -1.42
BRCA1-203ENST00000357654 PCDHGB4Q9UN71 923 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 FAN1Q9Y2M0 1017 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 CAB39Q9Y376 341 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-203ENST00000357654 RUSC2Q8N2Y8 1516 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 R3HDM1Q15032 1099 aaKnown RBP6.21□□□□□ -1.42
BRCA1-203ENST00000357654 DEPDC1Q5TB30 811 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 SLFN12Q8IYM2 578 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 KRT222Q8N1A0 295 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 TMX3Q96JJ7 454 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 SLC39A2Q9NP94 309 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 ZC3H7BQ9UGR2 993 aaKnown RBP6.21□□□□□ -1.42
BRCA1-203ENST00000357654 ITIH6Q6UXX5 1313 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 ERICH3Q5RHP9 1530 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 GOLGA8QA0A0J9YX86 632 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 GOLGA8OA6NCC3 632 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 GOLGA8NF8WBI6 632 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 HUS1O60921 280 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 NFICP08651 508 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 RALAP11233 206 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 LCP1P13796 627 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 CYP2B6P20813 491 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 MFAP3P55082 362 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 TMEM62Q0P6H9 643 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 ZSCAN23Q3MJ62 389 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 NAALADL2Q58DX5 795 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 PHLDB3Q6NSJ2 640 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 CHSY1Q86X52 802 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 ATXN7L3BQ96GX2 97 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 MSTO1Q9BUK6 570 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 FGFR1OP2Q9NVK5 253 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 DNAJC17Q9NVM6 304 aaKnown RBP6.21□□□□□ -1.42
BRCA1-203ENST00000357654 KLHL14Q9P2G3 628 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 TTC21BQ7Z4L5 1316 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 MEFVO15553 781 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-203ENST00000357654 TTI1O43156 1089 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 KRT8P05787 483 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms