RNA–Protein interactions for RNA: ENST00000332966.8

SLIT3-201, Transcript of slit guidance ligand 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLIT3, Length 4,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-201ENST00000332966 USP15Q9Y4E8 981 aaPredicted RBP17.15■□□□□ 0.34
SLIT3-201ENST00000332966 WDR17Q8IZU2 1322 aa17.15■□□□□ 0.34
SLIT3-201ENST00000332966 HSPA9P38646 679 aaKnown RBP17.15■□□□□ 0.34
SLIT3-201ENST00000332966 GRIN1Q05586 938 aa17.15■□□□□ 0.34
SLIT3-201ENST00000332966 EPM2AIP1Q7L775 607 aaPredicted RBP17.15■□□□□ 0.34
SLIT3-201ENST00000332966 SYT2Q8N9I0 419 aaPredicted RBP17.15■□□□□ 0.34
SLIT3-201ENST00000332966 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.15■□□□□ 0.34
SLIT3-201ENST00000332966 FAM205CA6NFA0 338 aa17.15■□□□□ 0.34
SLIT3-201ENST00000332966 RAD51CO43502 376 aa17.15■□□□□ 0.34
SLIT3-201ENST00000332966 RAD54LQ92698 747 aa17.15■□□□□ 0.34
SLIT3-201ENST00000332966 NT5C1BQ96P26 610 aa17.15■□□□□ 0.34
SLIT3-201ENST00000332966 CFBP00751 764 aa17.14■□□□□ 0.33
SLIT3-201ENST00000332966 FCER1AP12319 257 aa17.14■□□□□ 0.33
SLIT3-201ENST00000332966 CDKAL1Q5VV42 579 aa17.14■□□□□ 0.33
SLIT3-201ENST00000332966 SRRM1Q8IYB3 904 aaKnown RBP17.14■□□□□ 0.33
SLIT3-201ENST00000332966 TEX9Q8N6V9 391 aa17.14■□□□□ 0.33
SLIT3-201ENST00000332966 PTK2Q05397 1052 aa17.14■□□□□ 0.33
SLIT3-201ENST00000332966 PSMD6Q15008 389 aa17.14■□□□□ 0.33
SLIT3-201ENST00000332966 HADHQ16836 314 aaKnown RBP17.14■□□□□ 0.33
SLIT3-201ENST00000332966 TMED8Q6PL24 325 aaPredicted RBP17.14■□□□□ 0.33
SLIT3-201ENST00000332966 GIMAP8Q8ND71 665 aaPredicted RBP17.14■□□□□ 0.33
SLIT3-201ENST00000332966 USP32Q8NFA0 1604 aa17.14■□□□□ 0.33
SLIT3-201ENST00000332966 MT-ND3P03897 115 aa17.14■□□□□ 0.33
SLIT3-201ENST00000332966 DBN1Q16643 649 aa17.14■□□□□ 0.33
SLIT3-201ENST00000332966 GPATCH4Q5T3I0 446 aaKnown RBP17.14■□□□□ 0.33
SLIT3-201ENST00000332966 OR2W6PQ8NHA6 318 aa17.14■□□□□ 0.33
SLIT3-201ENST00000332966 ERGIC2Q96RQ1 377 aa17.14■□□□□ 0.33
SLIT3-201ENST00000332966 TRIM55Q9BYV6 548 aa17.14■□□□□ 0.33
SLIT3-201ENST00000332966 ZFP69BQ9UJL9 534 aa17.14■□□□□ 0.33
SLIT3-201ENST00000332966 GGA1Q9UJY5 639 aa17.14■□□□□ 0.33
SLIT3-201ENST00000332966 PCDHA1Q9Y5I3 950 aa17.14■□□□□ 0.33
SLIT3-201ENST00000332966 DDX39AO00148 427 aaKnown RBP17.14■□□□□ 0.33
SLIT3-201ENST00000332966 TNNI1P19237 187 aa17.14■□□□□ 0.33
SLIT3-201ENST00000332966 LRRC14Q15048 493 aa17.14■□□□□ 0.33
SLIT3-201ENST00000332966 KAZNQ674X7 775 aa17.14■□□□□ 0.33
SLIT3-201ENST00000332966 PRMT1Q99873 361 aaKnown RBP17.14■□□□□ 0.33
SLIT3-201ENST00000332966 RTCBQ9Y3I0 505 aaKnown RBP17.14■□□□□ 0.33
SLIT3-201ENST00000332966 LLGL1Q15334 1064 aa17.13■□□□□ 0.33
SLIT3-201ENST00000332966 TRIP13Q15645 432 aaPredicted RBP17.13■□□□□ 0.33
SLIT3-201ENST00000332966 UBE2TQ9NPD8 197 aaPredicted RBP17.13■□□□□ 0.33
SLIT3-201ENST00000332966 ENO4A6NNW6 628 aa17.13■□□□□ 0.33
SLIT3-201ENST00000332966 STK10O94804 968 aaKnown RBP17.13■□□□□ 0.33
SLIT3-201ENST00000332966 AFAP1L2Q8N4X5 818 aa17.13■□□□□ 0.33
SLIT3-201ENST00000332966 USP38Q8NB14 1042 aa17.13■□□□□ 0.33
SLIT3-201ENST00000332966 CAVIN3Q969G5 261 aa17.13■□□□□ 0.33
SLIT3-201ENST00000332966 ABCA9Q8IUA7 1624 aa17.13■□□□□ 0.33
SLIT3-201ENST00000332966 A0A0G2JLW4 131 aa17.13■□□□□ 0.33
SLIT3-201ENST00000332966 COASYQ13057 564 aa17.13■□□□□ 0.33
SLIT3-201ENST00000332966 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.13■□□□□ 0.33
SLIT3-201ENST00000332966 PNMA2Q9UL42 364 aa17.13■□□□□ 0.33
SLIT3-201ENST00000332966 TFR2Q9UP52 801 aa17.13■□□□□ 0.33
SLIT3-201ENST00000332966 ZC3H13Q5T200 1668 aaKnown RBP17.13■□□□□ 0.33
SLIT3-201ENST00000332966 ANXA13P27216 316 aa17.13■□□□□ 0.33
SLIT3-201ENST00000332966 CASC4Q6P4E1 433 aa17.13■□□□□ 0.33
SLIT3-201ENST00000332966 CCDC127Q96BQ5 260 aa17.13■□□□□ 0.33
SLIT3-201ENST00000332966 MLXIPLQ9NP71 852 aa17.13■□□□□ 0.33
SLIT3-201ENST00000332966 SEC31BQ9NQW1 1179 aa17.13■□□□□ 0.33
SLIT3-201ENST00000332966 DNAJC17Q9NVM6 304 aaKnown RBP17.13■□□□□ 0.33
SLIT3-201ENST00000332966 DMGDHQ9UI17 866 aaKnown RBP17.13■□□□□ 0.33
SLIT3-201ENST00000332966 DNAJC12Q9UKB3 198 aa17.13■□□□□ 0.33
SLIT3-201ENST00000332966 FRMPD1Q5SYB0 1578 aa17.12■□□□□ 0.33
SLIT3-201ENST00000332966 HARSP12081 509 aaKnown RBP17.12■□□□□ 0.33
SLIT3-201ENST00000332966 CD44P16070 742 aaKnown RBP17.12■□□□□ 0.33
SLIT3-201ENST00000332966 RFX5P48382 616 aaPredicted RBP17.12■□□□□ 0.33
SLIT3-201ENST00000332966 YWHAGP61981 247 aaKnown RBP eCLIP17.12■□□□□ 0.33
SLIT3-201ENST00000332966 NME8Q8N427 588 aa17.12■□□□□ 0.33
SLIT3-201ENST00000332966 KCNG1Q9UIX4 513 aa17.12■□□□□ 0.33
SLIT3-201ENST00000332966 PLAGL2Q9UPG8 496 aa17.12■□□□□ 0.33
SLIT3-201ENST00000332966 COMMD10Q9Y6G5 202 aa17.12■□□□□ 0.33
SLIT3-201ENST00000332966 TCP11X1B4DZS4 312 aa17.12■□□□□ 0.33
SLIT3-201ENST00000332966 CDR2Q01850 454 aa17.12■□□□□ 0.33
SLIT3-201ENST00000332966 TMC4Q7Z404 712 aa17.12■□□□□ 0.33
SLIT3-201ENST00000332966 RFFLQ8WZ73 363 aa17.12■□□□□ 0.33
SLIT3-201ENST00000332966 ARHGEF10LQ9HCE6 1279 aa17.12■□□□□ 0.33
SLIT3-201ENST00000332966 PNPLA7Q6ZV29 1317 aa17.12■□□□□ 0.33
SLIT3-201ENST00000332966 SLC8A3P57103 927 aa17.12■□□□□ 0.33
SLIT3-201ENST00000332966 NAB2Q15742 525 aa17.12■□□□□ 0.33
SLIT3-201ENST00000332966 DPP8Q6V1X1 898 aaPredicted RBP17.12■□□□□ 0.33
SLIT3-201ENST00000332966 NSMCE1Q8WV22 266 aa17.12■□□□□ 0.33
SLIT3-201ENST00000332966 FGD4Q96M96 766 aa17.12■□□□□ 0.33
SLIT3-201ENST00000332966 SGK1O00141 431 aa17.12■□□□□ 0.33
SLIT3-201ENST00000332966 PPP1R12AO14974 1030 aaPredicted RBP17.12■□□□□ 0.33
SLIT3-201ENST00000332966 TTI1O43156 1089 aa17.12■□□□□ 0.33
SLIT3-201ENST00000332966 GGPS1O95749 300 aa17.12■□□□□ 0.33
SLIT3-201ENST00000332966 MIER3Q7Z3K6 550 aa17.12■□□□□ 0.33
SLIT3-201ENST00000332966 C7orf25Q9BPX7 421 aa17.12■□□□□ 0.33
SLIT3-201ENST00000332966 INTUQ9ULD6 942 aa17.12■□□□□ 0.33
SLIT3-201ENST00000332966 PRPF6O94906 941 aaKnown RBP17.11■□□□□ 0.33
SLIT3-201ENST00000332966 CD19P15391 556 aa17.11■□□□□ 0.33
SLIT3-201ENST00000332966 HSD17B3P37058 310 aa17.11■□□□□ 0.33
SLIT3-201ENST00000332966 IL6STP40189 918 aaPredicted RBP17.11■□□□□ 0.33
SLIT3-201ENST00000332966 ZNF211Q13398 564 aaPredicted RBP17.11■□□□□ 0.33
SLIT3-201ENST00000332966 AGGF1Q8N302 714 aaeCLIP17.11■□□□□ 0.33
SLIT3-201ENST00000332966 COA7Q96BR5 231 aa17.11■□□□□ 0.33
SLIT3-201ENST00000332966 RIMBP2O15034 1052 aa17.11■□□□□ 0.33
SLIT3-201ENST00000332966 CDK17Q00537 523 aa17.11■□□□□ 0.33
SLIT3-201ENST00000332966 KLC1Q07866 573 aa17.11■□□□□ 0.33
SLIT3-201ENST00000332966 KIAA1755Q5JYT7 1200 aa17.11■□□□□ 0.33
SLIT3-201ENST00000332966 USP17L2Q6R6M4 530 aa17.11■□□□□ 0.33
SLIT3-201ENST00000332966 RNF207Q6ZRF8 634 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms