RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 SERPINI1Q99574 410 aa12.94□□□□□ -0.34
PCF11-201ENST00000298281 hCG_1642624A0A1W2PR95 340 aa12.94□□□□□ -0.34
PCF11-201ENST00000298281 CFAP69A5D8W1 941 aa12.94□□□□□ -0.34
PCF11-201ENST00000298281 E5RI56 91 aa12.94□□□□□ -0.34
PCF11-201ENST00000298281 MRPS15P82914 257 aaKnown RBP12.94□□□□□ -0.34
PCF11-201ENST00000298281 MKRN3Q13064 507 aaKnown RBP12.94□□□□□ -0.34
PCF11-201ENST00000298281 SEPT2Q15019 361 aa12.94□□□□□ -0.34
PCF11-201ENST00000298281 CEP78Q5JTW2 689 aa12.94□□□□□ -0.34
PCF11-201ENST00000298281 MFSD4BQ5TF39 518 aa12.94□□□□□ -0.34
PCF11-201ENST00000298281 ARHGEF18Q6ZSZ5 1173 aa12.94□□□□□ -0.34
PCF11-201ENST00000298281 KIAA2013Q8IYS2 634 aa12.94□□□□□ -0.34
PCF11-201ENST00000298281 MAN1C1Q9NR34 630 aa12.94□□□□□ -0.34
PCF11-201ENST00000298281 LEMD3Q9Y2U8 911 aa12.94□□□□□ -0.34
PCF11-201ENST00000298281 A0A1B0GW55 424 aa12.94□□□□□ -0.34
PCF11-201ENST00000298281 DUX4L2P0CJ85 424 aa12.94□□□□□ -0.34
PCF11-201ENST00000298281 DUX4L3P0CJ86 424 aa12.94□□□□□ -0.34
PCF11-201ENST00000298281 DUX4L4P0CJ87 422 aa12.94□□□□□ -0.34
PCF11-201ENST00000298281 DUX4L5P0CJ88 424 aa12.94□□□□□ -0.34
PCF11-201ENST00000298281 DUX4L6P0CJ89 424 aa12.94□□□□□ -0.34
PCF11-201ENST00000298281 DUX4L7P0CJ90 424 aa12.94□□□□□ -0.34
PCF11-201ENST00000298281 PTGDRQ13258 359 aa12.94□□□□□ -0.34
PCF11-201ENST00000298281 RABGGTAQ92696 567 aa12.94□□□□□ -0.34
PCF11-201ENST00000298281 RNF26Q9BY78 433 aaPredicted RBP12.94□□□□□ -0.34
PCF11-201ENST00000298281 DUX4Q9UBX2 424 aa12.94□□□□□ -0.34
PCF11-201ENST00000298281 PACSIN2Q9UNF0 486 aaPredicted RBP12.94□□□□□ -0.34
PCF11-201ENST00000298281 APBA3O96018 575 aa12.93□□□□□ -0.34
PCF11-201ENST00000298281 ADCK5Q3MIX3 580 aa12.93□□□□□ -0.34
PCF11-201ENST00000298281 FGD2Q7Z6J4 655 aa12.93□□□□□ -0.34
PCF11-201ENST00000298281 BCAS4Q8TDM0 211 aa12.93□□□□□ -0.34
PCF11-201ENST00000298281 LGR6Q9HBX8 967 aa12.93□□□□□ -0.34
PCF11-201ENST00000298281 RBBP7Q16576 425 aa12.93□□□□□ -0.34
PCF11-201ENST00000298281 NUDT18Q6ZVK8 323 aa12.93□□□□□ -0.34
PCF11-201ENST00000298281 HDDC2Q7Z4H3 204 aa12.93□□□□□ -0.34
PCF11-201ENST00000298281 NLGN1Q8N2Q7 840 aa12.93□□□□□ -0.34
PCF11-201ENST00000298281 FBXO41Q8TF61 875 aa12.93□□□□□ -0.34
PCF11-201ENST00000298281 MAGOHBQ96A72 148 aaKnown RBP12.93□□□□□ -0.34
PCF11-201ENST00000298281 ATP8B1O43520 1251 aa12.93□□□□□ -0.34
PCF11-201ENST00000298281 MMS22LQ6ZRQ5 1243 aa12.93□□□□□ -0.34
PCF11-201ENST00000298281 PI4K2BQ8TCG2 481 aa12.93□□□□□ -0.34
PCF11-201ENST00000298281 CASS4Q9NQ75 786 aa12.93□□□□□ -0.34
PCF11-201ENST00000298281 CAB39Q9Y376 341 aaPredicted RBP12.93□□□□□ -0.34
PCF11-201ENST00000298281 DYNLT1P63172 113 aa12.93□□□□□ -0.34
PCF11-201ENST00000298281 INTS9Q9NV88 658 aaKnown RBP12.93□□□□□ -0.34
PCF11-201ENST00000298281 DBNLQ9UJU6 430 aaKnown RBP12.93□□□□□ -0.34
PCF11-201ENST00000298281 USP21Q9UK80 565 aa12.93□□□□□ -0.34
PCF11-201ENST00000298281 GADD45BO75293 160 aaPredicted RBP12.93□□□□□ -0.34
PCF11-201ENST00000298281 OSBPP22059 807 aa12.93□□□□□ -0.34
PCF11-201ENST00000298281 CCDC142Q17RM4 750 aa12.93□□□□□ -0.34
PCF11-201ENST00000298281 MTBPQ96DY7 904 aa12.93□□□□□ -0.34
PCF11-201ENST00000298281 SERPINB2P05120 415 aa12.93□□□□□ -0.34
PCF11-201ENST00000298281 CUL1Q13616 776 aa12.93□□□□□ -0.34
PCF11-201ENST00000298281 ULK4Q96C45 1275 aa12.93□□□□□ -0.34
PCF11-201ENST00000298281 CENPKQ9BS16 269 aa12.93□□□□□ -0.34
PCF11-201ENST00000298281 SUN2Q9UH99 717 aa12.93□□□□□ -0.34
PCF11-201ENST00000298281 LRRC53A6NM62 1247 aa12.92□□□□□ -0.34
PCF11-201ENST00000298281 PPP6R2O75170 966 aa12.92□□□□□ -0.34
PCF11-201ENST00000298281 POLA2Q14181 598 aa12.92□□□□□ -0.34
PCF11-201ENST00000298281 SUPT20HL1Q3ZLR7 823 aa12.92□□□□□ -0.34
PCF11-201ENST00000298281 ENAHQ8N8S7 591 aaPredicted RBP12.92□□□□□ -0.34
PCF11-201ENST00000298281 TMEM161AQ9NX61 479 aa12.92□□□□□ -0.34
PCF11-201ENST00000298281 ARL4AP40617 200 aa12.92□□□□□ -0.34
PCF11-201ENST00000298281 FKBP3Q00688 224 aaKnown RBP12.92□□□□□ -0.34
PCF11-201ENST00000298281 PDCLQ13371 301 aa12.92□□□□□ -0.34
PCF11-201ENST00000298281 DMC1Q14565 340 aa12.92□□□□□ -0.34
PCF11-201ENST00000298281 BZW1Q7L1Q6 419 aaKnown RBP12.92□□□□□ -0.34
PCF11-201ENST00000298281 CENPTQ96BT3 561 aa12.92□□□□□ -0.34
PCF11-201ENST00000298281 ACCSQ96QU6 501 aa12.92□□□□□ -0.34
PCF11-201ENST00000298281 USP28Q96RU2 1077 aa12.92□□□□□ -0.34
PCF11-201ENST00000298281 KDM4CQ9H3R0 1056 aa12.92□□□□□ -0.34
PCF11-201ENST00000298281 PRG3Q9Y2Y8 225 aaPredicted RBP12.92□□□□□ -0.34
PCF11-201ENST00000298281 TRPC1P48995 793 aa12.92□□□□□ -0.34
PCF11-201ENST00000298281 ADCY1Q08828 1119 aa12.92□□□□□ -0.34
PCF11-201ENST00000298281 MEI1Q5TIA1 1274 aa12.92□□□□□ -0.34
PCF11-201ENST00000298281 TUBGCP2Q9BSJ2 902 aa12.92□□□□□ -0.34
PCF11-201ENST00000298281 FRMPD2Q68DX3 1309 aaPredicted RBP12.92□□□□□ -0.34
PCF11-201ENST00000298281 ABCC12Q96J65 1359 aa12.92□□□□□ -0.34
PCF11-201ENST00000298281 BUB1O43683 1085 aa12.92□□□□□ -0.34
PCF11-201ENST00000298281 COPB1P53618 953 aaKnown RBP12.92□□□□□ -0.34
PCF11-201ENST00000298281 MAP3K10Q02779 954 aa12.92□□□□□ -0.34
PCF11-201ENST00000298281 ALCAMQ13740 583 aa12.92□□□□□ -0.34
PCF11-201ENST00000298281 MIS18BP1Q6P0N0 1132 aa12.92□□□□□ -0.34
PCF11-201ENST00000298281 LRRC8AQ8IWT6 810 aa12.92□□□□□ -0.34
PCF11-201ENST00000298281 LARP4BQ92615 738 aaKnown RBP12.92□□□□□ -0.34
PCF11-201ENST00000298281 DPH5Q9H2P9 285 aa12.92□□□□□ -0.34
PCF11-201ENST00000298281 DDX28Q9NUL7 540 aaKnown RBP12.92□□□□□ -0.34
PCF11-201ENST00000298281 SNX5Q9Y5X3 404 aa12.92□□□□□ -0.34
PCF11-201ENST00000298281 FMNL1O95466 1100 aaPredicted RBP12.92□□□□□ -0.34
PCF11-201ENST00000298281 DARS2Q6PI48 645 aaKnown RBP12.92□□□□□ -0.34
PCF11-201ENST00000298281 BCL2L14Q9BZR8 327 aa12.92□□□□□ -0.34
PCF11-201ENST00000298281 GPR108Q9NPR9 543 aa12.92□□□□□ -0.34
PCF11-201ENST00000298281 POLE3Q9NRF9 147 aa12.92□□□□□ -0.34
PCF11-201ENST00000298281 FAM135BQ49AJ0 1406 aa12.92□□□□□ -0.34
PCF11-201ENST00000298281 WDR91A4D1P6 747 aa12.92□□□□□ -0.34
PCF11-201ENST00000298281 DDX53Q86TM3 631 aaKnown RBP12.92□□□□□ -0.34
PCF11-201ENST00000298281 AFG1LQ8WV93 481 aa12.92□□□□□ -0.34
PCF11-201ENST00000298281 DHX38Q92620 1227 aaKnown RBP12.92□□□□□ -0.34
PCF11-201ENST00000298281 CNOT6LQ96LI5 555 aaKnown RBP12.92□□□□□ -0.34
PCF11-201ENST00000298281 EDEM3Q9BZQ6 932 aa12.92□□□□□ -0.34
PCF11-201ENST00000298281 SLC39A2Q9NP94 309 aa12.92□□□□□ -0.34
PCF11-201ENST00000298281 RPRD1BQ9NQG5 326 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms