RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 TUBB4AP04350 444 aa25.55■■□□□ 1.68
RAB40B-201ENST00000269347 CASQ1P31415 396 aa25.55■■□□□ 1.68
RAB40B-201ENST00000269347 MARSP56192 900 aaKnown RBP25.55■■□□□ 1.68
RAB40B-201ENST00000269347 GLIPR1L2Q4G1C9 344 aa25.55■■□□□ 1.68
RAB40B-201ENST00000269347 RETREG2Q8NC44 543 aa25.55■■□□□ 1.68
RAB40B-201ENST00000269347 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.55■■□□□ 1.68
RAB40B-201ENST00000269347 NUP58Q9BVL2 599 aa25.55■■□□□ 1.68
RAB40B-201ENST00000269347 NHEJ1Q9H9Q4 299 aaPredicted RBP25.55■■□□□ 1.68
RAB40B-201ENST00000269347 ARHGAP20Q9P2F6 1191 aa25.55■■□□□ 1.68
RAB40B-201ENST00000269347 AKAP3O75969 853 aa25.55■■□□□ 1.68
RAB40B-201ENST00000269347 FGFR1OPO95684 399 aaKnown RBP25.55■■□□□ 1.68
RAB40B-201ENST00000269347 DSG3P32926 999 aa25.55■■□□□ 1.68
RAB40B-201ENST00000269347 BMT2Q1RMZ1 405 aa25.55■■□□□ 1.68
RAB40B-201ENST00000269347 ERCC6LQ2NKX8 1250 aa25.55■■□□□ 1.68
RAB40B-201ENST00000269347 SNRNP48Q6IEG0 339 aaKnown RBP25.55■■□□□ 1.68
RAB40B-201ENST00000269347 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.55■■□□□ 1.68
RAB40B-201ENST00000269347 TRMT1LQ7Z2T5 733 aaKnown RBP25.55■■□□□ 1.68
RAB40B-201ENST00000269347 KRT26Q7Z3Y9 468 aa25.55■■□□□ 1.68
RAB40B-201ENST00000269347 SLC35F6Q8N357 371 aa25.55■■□□□ 1.68
RAB40B-201ENST00000269347 ERO1AQ96HE7 468 aa25.55■■□□□ 1.68
RAB40B-201ENST00000269347 C12orf42Q96LP6 360 aa25.55■■□□□ 1.68
RAB40B-201ENST00000269347 CARD6Q9BX69 1037 aa25.55■■□□□ 1.68
RAB40B-201ENST00000269347 AFG3L2Q9Y4W6 797 aa25.55■■□□□ 1.68
RAB40B-201ENST00000269347 PAPPA2Q9BXP8 1791 aa25.54■■□□□ 1.68
RAB40B-201ENST00000269347 CCNE2O96020 404 aa25.54■■□□□ 1.68
RAB40B-201ENST00000269347 HOXA7P31268 230 aaPredicted RBP25.54■■□□□ 1.68
RAB40B-201ENST00000269347 MAP3K9P80192 1104 aa25.54■■□□□ 1.68
RAB40B-201ENST00000269347 CYP27A1Q02318 531 aa25.54■■□□□ 1.68
RAB40B-201ENST00000269347 MTMR1Q13613 665 aa25.54■■□□□ 1.68
RAB40B-201ENST00000269347 EDRF1Q3B7T1 1238 aa25.54■■□□□ 1.68
RAB40B-201ENST00000269347 ZNF569Q5MCW4 686 aa25.54■■□□□ 1.68
RAB40B-201ENST00000269347 MAEAQ7L5Y9 396 aa25.54■■□□□ 1.68
RAB40B-201ENST00000269347 MIER3Q7Z3K6 550 aa25.54■■□□□ 1.68
RAB40B-201ENST00000269347 MYCT1Q8N699 235 aa25.54■■□□□ 1.68
RAB40B-201ENST00000269347 LACRTQ9GZZ8 138 aa25.54■■□□□ 1.68
RAB40B-201ENST00000269347 LRRC53A6NM62 1247 aa25.54■■□□□ 1.68
RAB40B-201ENST00000269347 ADM5C9JUS6 153 aa25.54■■□□□ 1.68
RAB40B-201ENST00000269347 TBCAO75347 108 aaKnown RBP25.54■■□□□ 1.68
RAB40B-201ENST00000269347 DPY19L2P1Q6NXN4 242 aa25.54■■□□□ 1.68
RAB40B-201ENST00000269347 OLFML3Q9NRN5 406 aa25.54■■□□□ 1.68
RAB40B-201ENST00000269347 NACC1Q96RE7 527 aa25.53■■□□□ 1.68
RAB40B-201ENST00000269347 AS3MTQ9HBK9 375 aa25.53■■□□□ 1.68
RAB40B-201ENST00000269347 SNCAIPQ9Y6H5 919 aa25.53■■□□□ 1.68
RAB40B-201ENST00000269347 DUSP10Q9Y6W6 482 aa25.53■■□□□ 1.68
RAB40B-201ENST00000269347 RGS20O76081 388 aa25.52■■□□□ 1.68
RAB40B-201ENST00000269347 CATSPERGQ6ZRH7 1159 aa25.52■■□□□ 1.68
RAB40B-201ENST00000269347 PLAGL2Q9UPG8 496 aa25.52■■□□□ 1.68
RAB40B-201ENST00000269347 MRFAP1Q9Y605 127 aa25.52■■□□□ 1.68
RAB40B-201ENST00000269347 FAM13AO94988 1023 aa25.52■■□□□ 1.68
RAB40B-201ENST00000269347 ZNF131P52739 623 aa25.52■■□□□ 1.68
RAB40B-201ENST00000269347 VGLL4Q14135 290 aa25.52■■□□□ 1.68
RAB40B-201ENST00000269347 NIPA1Q7RTP0 329 aa25.52■■□□□ 1.68
RAB40B-201ENST00000269347 EPC1Q9H2F5 836 aa25.52■■□□□ 1.68
RAB40B-201ENST00000269347 NLRC4Q9NPP4 1024 aa25.52■■□□□ 1.68
RAB40B-201ENST00000269347 TLR2O60603 784 aa25.51■■□□□ 1.67
RAB40B-201ENST00000269347 TREML2Q5T2D2 321 aa25.51■■□□□ 1.67
RAB40B-201ENST00000269347 RRAGAQ7L523 313 aa25.51■■□□□ 1.67
RAB40B-201ENST00000269347 CTDP1Q9Y5B0 961 aaPredicted RBP25.51■■□□□ 1.67
RAB40B-201ENST00000269347 SPDYE16A6NNV3 312 aaPredicted RBP25.51■■□□□ 1.67
RAB40B-201ENST00000269347 PDXKO00764 312 aa25.51■■□□□ 1.67
RAB40B-201ENST00000269347 HNRNPH3P31942 346 aaKnown RBP25.51■■□□□ 1.67
RAB40B-201ENST00000269347 ARHGAP29Q52LW3 1261 aa25.51■■□□□ 1.67
RAB40B-201ENST00000269347 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.51■■□□□ 1.67
RAB40B-201ENST00000269347 LOXHD1Q8IVV2 1947 aa25.51■■□□□ 1.67
RAB40B-201ENST00000269347 TESPA1A2RU30 521 aaPredicted RBP25.5■■□□□ 1.67
RAB40B-201ENST00000269347 HIP1RO75146 1068 aa25.5■■□□□ 1.67
RAB40B-201ENST00000269347 NR3C1P04150 777 aa25.5■■□□□ 1.67
RAB40B-201ENST00000269347 ACTN1P12814 892 aa25.5■■□□□ 1.67
RAB40B-201ENST00000269347 KCNH2Q12809 1159 aa25.5■■□□□ 1.67
RAB40B-201ENST00000269347 FSTL1Q12841 308 aa25.5■■□□□ 1.67
RAB40B-201ENST00000269347 ZNF720Q7Z2F6 126 aa25.5■■□□□ 1.67
RAB40B-201ENST00000269347 LSM14BQ9BX40 385 aaKnown RBP25.5■■□□□ 1.67
RAB40B-201ENST00000269347 R3HDMLQ9H3Y0 253 aa25.5■■□□□ 1.67
RAB40B-201ENST00000269347 PARVGQ9HBI0 331 aa25.5■■□□□ 1.67
RAB40B-201ENST00000269347 TYW1Q9NV66 732 aaKnown RBP25.5■■□□□ 1.67
RAB40B-201ENST00000269347 GUCA1BQ9UMX6 200 aa25.5■■□□□ 1.67
RAB40B-201ENST00000269347 CETN3O15182 167 aa25.49■■□□□ 1.67
RAB40B-201ENST00000269347 YBX3P16989 372 aaKnown RBP eCLIP25.49■■□□□ 1.67
RAB40B-201ENST00000269347 NOL9Q5SY16 702 aaKnown RBP25.49■■□□□ 1.67
RAB40B-201ENST00000269347 ARHGEF16Q5VV41 709 aa25.49■■□□□ 1.67
RAB40B-201ENST00000269347 SAMM50Q9Y512 469 aa25.49■■□□□ 1.67
RAB40B-201ENST00000269347 HGSNATQ68CP4 663 aa25.49■■□□□ 1.67
RAB40B-201ENST00000269347 PDXDC1Q6P996 788 aa25.49■■□□□ 1.67
RAB40B-201ENST00000269347 PADI6Q6TGC4 694 aa25.49■■□□□ 1.67
RAB40B-201ENST00000269347 PPP4R3CPQ6ZMV5 832 aa25.49■■□□□ 1.67
RAB40B-201ENST00000269347 PDCL2Q8N4E4 241 aa25.49■■□□□ 1.67
RAB40B-201ENST00000269347 TISP43B9A030 160 aa25.48■■□□□ 1.67
RAB40B-201ENST00000269347 P4HBP07237 508 aaKnown RBP25.48■■□□□ 1.67
RAB40B-201ENST00000269347 MOB2Q70IA6 237 aa25.48■■□□□ 1.67
RAB40B-201ENST00000269347 KCTD17Q8N5Z5 321 aa25.48■■□□□ 1.67
RAB40B-201ENST00000269347 A1CFQ9NQ94 594 aaKnown RBP25.48■■□□□ 1.67
RAB40B-201ENST00000269347 C19orf81C9J6K1 198 aa25.48■■□□□ 1.67
RAB40B-201ENST00000269347 KIF5CO60282 957 aa25.48■■□□□ 1.67
RAB40B-201ENST00000269347 SORBS3O60504 671 aa25.48■■□□□ 1.67
RAB40B-201ENST00000269347 TADA3O75528 432 aa25.48■■□□□ 1.67
RAB40B-201ENST00000269347 NR3C2P08235 984 aa25.48■■□□□ 1.67
RAB40B-201ENST00000269347 GAP43P17677 238 aa25.48■■□□□ 1.67
RAB40B-201ENST00000269347 SLC9A1P19634 815 aa25.48■■□□□ 1.67
RAB40B-201ENST00000269347 MUTP22033 750 aa25.48■■□□□ 1.67
RAB40B-201ENST00000269347 RARRES1P49788 294 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms