RNA–Protein interactions for RNA: ENST00000260777.14

SHTN1-201, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 5,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-201ENST00000260777 E9PCH4 1651 aa17.08■□□□□ 0.32
SHTN1-201ENST00000260777 IQSEC2Q5JU85 1478 aa17.08■□□□□ 0.32
SHTN1-201ENST00000260777 BASP1P80723 227 aaKnown RBP17.08■□□□□ 0.32
SHTN1-201ENST00000260777 MRPS25P82663 173 aaKnown RBP17.08■□□□□ 0.32
SHTN1-201ENST00000260777 SURF1Q15526 300 aa17.08■□□□□ 0.32
SHTN1-201ENST00000260777 TBC1D9BQ66K14 1250 aa17.08■□□□□ 0.32
SHTN1-201ENST00000260777 E4F1Q66K89 784 aaPredicted RBP17.08■□□□□ 0.32
SHTN1-201ENST00000260777 EDEM3Q9BZQ6 932 aa17.08■□□□□ 0.32
SHTN1-201ENST00000260777 A0A1B0GTH6 734 aa17.08■□□□□ 0.32
SHTN1-201ENST00000260777 XPOTO43592 962 aaKnown RBP17.08■□□□□ 0.32
SHTN1-201ENST00000260777 CNGA1P29973 690 aa17.08■□□□□ 0.32
SHTN1-201ENST00000260777 ECE1P42892 770 aa17.08■□□□□ 0.32
SHTN1-201ENST00000260777 HSP90AA5PQ58FG0 334 aa17.08■□□□□ 0.32
SHTN1-201ENST00000260777 DARS2Q6PI48 645 aaKnown RBP17.08■□□□□ 0.32
SHTN1-201ENST00000260777 TMEM179Q6ZVK1 233 aa17.08■□□□□ 0.32
SHTN1-201ENST00000260777 SFR1Q86XK3 245 aa17.08■□□□□ 0.32
SHTN1-201ENST00000260777 CLRN2A0PK11 232 aa17.07■□□□□ 0.32
SHTN1-201ENST00000260777 MAPK13O15264 365 aa17.07■□□□□ 0.32
SHTN1-201ENST00000260777 ORC4O43929 436 aa17.07■□□□□ 0.32
SHTN1-201ENST00000260777 NFRKBQ6P4R8 1299 aa17.07■□□□□ 0.32
SHTN1-201ENST00000260777 WDR24Q96S15 920 aa17.07■□□□□ 0.32
SHTN1-201ENST00000260777 IPO11Q9UI26 975 aaKnown RBP17.07■□□□□ 0.32
SHTN1-201ENST00000260777 ZNF609O15014 1411 aa17.07■□□□□ 0.32
SHTN1-201ENST00000260777 PSAPP07602 524 aa17.07■□□□□ 0.32
SHTN1-201ENST00000260777 GRM1Q13255 1194 aa17.07■□□□□ 0.32
SHTN1-201ENST00000260777 RNF207Q6ZRF8 634 aa17.07■□□□□ 0.32
SHTN1-201ENST00000260777 ATG9AQ7Z3C6 839 aa17.07■□□□□ 0.32
SHTN1-201ENST00000260777 KCTD6Q8NC69 237 aa17.07■□□□□ 0.32
SHTN1-201ENST00000260777 PCDHA6Q9UN73 950 aa17.07■□□□□ 0.32
SHTN1-201ENST00000260777 MINPP1Q9UNW1 487 aa17.07■□□□□ 0.32
SHTN1-201ENST00000260777 PCDHA8Q9Y5H6 950 aa17.07■□□□□ 0.32
SHTN1-201ENST00000260777 MMEL1Q495T6 779 aa17.07■□□□□ 0.32
SHTN1-201ENST00000260777 NUGGCQ68CJ6 796 aa17.07■□□□□ 0.32
SHTN1-201ENST00000260777 DPF2Q92785 391 aa17.07■□□□□ 0.32
SHTN1-201ENST00000260777 TRIM4Q9C037 500 aa17.07■□□□□ 0.32
SHTN1-201ENST00000260777 GSTA1P08263 222 aa17.07■□□□□ 0.32
SHTN1-201ENST00000260777 GSTA2P09210 222 aa17.07■□□□□ 0.32
SHTN1-201ENST00000260777 GPC5P78333 572 aa17.07■□□□□ 0.32
SHTN1-201ENST00000260777 CAV1Q03135 178 aa17.07■□□□□ 0.32
SHTN1-201ENST00000260777 TBC1D10BQ4KMP7 808 aaPredicted RBP17.07■□□□□ 0.32
SHTN1-201ENST00000260777 RPAINQ86UA6 219 aa17.07■□□□□ 0.32
SHTN1-201ENST00000260777 GSDMBQ8TAX9 411 aa17.07■□□□□ 0.32
SHTN1-201ENST00000260777 NLRP7Q8WX94 980 aa17.07■□□□□ 0.32
SHTN1-201ENST00000260777 FAM20AQ96MK3 541 aa17.07■□□□□ 0.32
SHTN1-201ENST00000260777 SNX24Q9Y343 169 aa17.07■□□□□ 0.32
SHTN1-201ENST00000260777 IQANK1A0A1B0GTG1 560 aa17.06■□□□□ 0.32
SHTN1-201ENST00000260777 FRMD3A2A2Y4 597 aa17.06■□□□□ 0.32
SHTN1-201ENST00000260777 PFDN6O15212 129 aa17.06■□□□□ 0.32
SHTN1-201ENST00000260777 GPC4O75487 556 aa17.06■□□□□ 0.32
SHTN1-201ENST00000260777 SRGAP2BP0DMP2 458 aa17.06■□□□□ 0.32
SHTN1-201ENST00000260777 DYNLT1P63172 113 aa17.06■□□□□ 0.32
SHTN1-201ENST00000260777 LLGL1Q15334 1064 aa17.06■□□□□ 0.32
SHTN1-201ENST00000260777 LCMT1Q9UIC8 334 aa17.06■□□□□ 0.32
SHTN1-201ENST00000260777 ACSL3O95573 720 aa17.06■□□□□ 0.32
SHTN1-201ENST00000260777 KRT3P12035 628 aa17.06■□□□□ 0.32
SHTN1-201ENST00000260777 PLS3P13797 630 aa17.06■□□□□ 0.32
SHTN1-201ENST00000260777 CA4P22748 312 aa17.06■□□□□ 0.32
SHTN1-201ENST00000260777 PRDX5P30044 214 aa17.06■□□□□ 0.32
SHTN1-201ENST00000260777 HOXA13P31271 388 aaPredicted RBP17.06■□□□□ 0.32
SHTN1-201ENST00000260777 TAF11Q15544 211 aa17.06■□□□□ 0.32
SHTN1-201ENST00000260777 GSPT2Q8IYD1 628 aaKnown RBP17.06■□□□□ 0.32
SHTN1-201ENST00000260777 HVCN1Q96D96 273 aa17.06■□□□□ 0.32
SHTN1-201ENST00000260777 DBNDD1Q9H9R9 158 aa17.06■□□□□ 0.32
SHTN1-201ENST00000260777 THEGQ9P2T0 379 aa17.06■□□□□ 0.32
SHTN1-201ENST00000260777 ITIH6Q6UXX5 1313 aa17.06■□□□□ 0.32
SHTN1-201ENST00000260777 COG1Q8WTW3 980 aa17.06■□□□□ 0.32
SHTN1-201ENST00000260777 ELAC2Q9BQ52 826 aaKnown RBP17.06■□□□□ 0.32
SHTN1-201ENST00000260777 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.06■□□□□ 0.321e-6■□□□□ 11.2
SHTN1-201ENST00000260777 HDAC6Q9UBN7 1215 aa17.06■□□□□ 0.32
SHTN1-201ENST00000260777 ZNF233A6NK53 670 aa17.06■□□□□ 0.32
SHTN1-201ENST00000260777 NMT2O60551 498 aa17.06■□□□□ 0.32
SHTN1-201ENST00000260777 DCTN3O75935 186 aa17.06■□□□□ 0.32
SHTN1-201ENST00000260777 KNOP1Q1ED39 458 aaKnown RBP17.06■□□□□ 0.32
SHTN1-201ENST00000260777 PDIK1LQ8N165 341 aa17.06■□□□□ 0.32
SHTN1-201ENST00000260777 AXIN2Q9Y2T1 843 aa17.06■□□□□ 0.32
SHTN1-201ENST00000260777 ACTN1P12814 892 aa17.06■□□□□ 0.32
SHTN1-201ENST00000260777 SAT1P21673 171 aa17.06■□□□□ 0.32
SHTN1-201ENST00000260777 PEX19P40855 299 aa17.06■□□□□ 0.32
SHTN1-201ENST00000260777 NR1H3Q13133 447 aa17.06■□□□□ 0.32
SHTN1-201ENST00000260777 TRIM28Q13263 835 aaKnown RBP17.06■□□□□ 0.32
SHTN1-201ENST00000260777 NBPF9Q3BBW0 867 aa17.06■□□□□ 0.32
SHTN1-201ENST00000260777 SLFN12LQ6IEE8 588 aa17.06■□□□□ 0.32
SHTN1-201ENST00000260777 ANKRD7Q92527 254 aa17.06■□□□□ 0.32
SHTN1-201ENST00000260777 LRGUKQ96M69 825 aa17.06■□□□□ 0.32
SHTN1-201ENST00000260777 EPC1Q9H2F5 836 aa17.06■□□□□ 0.32
SHTN1-201ENST00000260777 TAF1DQ9H5J8 278 aaPredicted RBP17.06■□□□□ 0.32
SHTN1-201ENST00000260777 ADD3Q9UEY8 706 aaKnown RBP17.06■□□□□ 0.32
SHTN1-201ENST00000260777 SPATA31A3Q5VYP0 1347 aa17.05■□□□□ 0.32
SHTN1-201ENST00000260777 E9PMD0 336 aa17.05■□□□□ 0.32
SHTN1-201ENST00000260777 SMIM24O75264 130 aa17.05■□□□□ 0.32
SHTN1-201ENST00000260777 ATP1A1P05023 1023 aaKnown RBP17.05■□□□□ 0.32
SHTN1-201ENST00000260777 PYROXD1Q8WU10 500 aa17.05■□□□□ 0.32
SHTN1-201ENST00000260777 ZNF408Q9H9D4 720 aa17.05■□□□□ 0.32
SHTN1-201ENST00000260777 TUBE1Q9UJT0 475 aa17.05■□□□□ 0.32
SHTN1-201ENST00000260777 SKIP12755 728 aa17.05■□□□□ 0.32
SHTN1-201ENST00000260777 PPP2R2AP63151 447 aa17.05■□□□□ 0.32
SHTN1-201ENST00000260777 TFAMQ00059 246 aaKnown RBP17.05■□□□□ 0.32
SHTN1-201ENST00000260777 GADL1Q6ZQY3 521 aa17.05■□□□□ 0.32
SHTN1-201ENST00000260777 INO80B-WBP1J3KQ70 363 aa17.05■□□□□ 0.32
SHTN1-201ENST00000260777 TJP3O95049 919 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms