RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 CAPN11Q9UMQ6 739 aa8.81□□□□□ -1
APOB-201ENST00000233242 PCDHB4Q9Y5E5 795 aa8.81□□□□□ -1
APOB-201ENST00000233242 MXI1P50539 228 aa8.81□□□□□ -1
APOB-201ENST00000233242 SLC20A2Q08357 652 aa8.81□□□□□ -1
APOB-201ENST00000233242 RNF207Q6ZRF8 634 aa8.81□□□□□ -1
APOB-201ENST00000233242 BLOC1S6Q9UL45 172 aa8.81□□□□□ -1
APOB-201ENST00000233242 ZNF711Q9Y462 761 aa8.81□□□□□ -1
APOB-201ENST00000233242 KDM5CP41229 1560 aa8.81□□□□□ -1
APOB-201ENST00000233242 HSPA13P48723 471 aa8.81□□□□□ -1
APOB-201ENST00000233242 MAP3K10Q02779 954 aa8.81□□□□□ -1
APOB-201ENST00000233242 MAPRE2Q15555 327 aa8.81□□□□□ -1
APOB-201ENST00000233242 DARS2Q6PI48 645 aaKnown RBP8.81□□□□□ -1
APOB-201ENST00000233242 TRMT10CQ7L0Y3 403 aaKnown RBP8.81□□□□□ -1
APOB-201ENST00000233242 LCA5Q86VQ0 697 aa8.81□□□□□ -1
APOB-201ENST00000233242 PLEKHF1Q96S99 279 aa8.81□□□□□ -1
APOB-201ENST00000233242 DONSONQ9NYP3 566 aa8.81□□□□□ -1
APOB-201ENST00000233242 TMEM191BP0C7N4 346 aa8.81□□□□□ -1
APOB-201ENST00000233242 ALKBH8Q96BT7 664 aaKnown RBP8.81□□□□□ -1
APOB-201ENST00000233242 NDUFB9Q9Y6M9 179 aa8.81□□□□□ -1
APOB-201ENST00000233242 ATP10BO94823 1461 aa8.81□□□□□ -1
APOB-201ENST00000233242 TRPC1P48995 793 aa8.81□□□□□ -1
APOB-201ENST00000233242 RCSD1Q6JBY9 416 aa8.81□□□□□ -1
APOB-201ENST00000233242 SCYL2Q6P3W7 929 aa8.81□□□□□ -1
APOB-201ENST00000233242 RASSF3Q86WH2 238 aa8.81□□□□□ -1
APOB-201ENST00000233242 GPKOWQ92917 476 aaPredicted RBP eCLIP8.81□□□□□ -1
APOB-201ENST00000233242 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.81□□□□□ -15e-7■■■■□ 23.5
APOB-201ENST00000233242 THOC1Q96FV9 657 aaKnown RBP8.81□□□□□ -1
APOB-201ENST00000233242 HIC2Q96JB3 615 aa8.81□□□□□ -1
APOB-201ENST00000233242 RTCBQ9Y3I0 505 aaKnown RBP8.81□□□□□ -1
APOB-201ENST00000233242 ABCA5Q8WWZ7 1642 aa8.81□□□□□ -1
APOB-201ENST00000233242 BASP1P80723 227 aaKnown RBP8.81□□□□□ -1
APOB-201ENST00000233242 TRPM8Q7Z2W7 1104 aa8.81□□□□□ -1
APOB-201ENST00000233242 KCTD6Q8NC69 237 aa8.81□□□□□ -1
APOB-201ENST00000233242 KCNV2Q8TDN2 545 aa8.81□□□□□ -1
APOB-201ENST00000233242 ZNF473Q8WTR7 871 aaKnown RBP8.8□□□□□ -1
APOB-201ENST00000233242 KLC2Q9H0B6 622 aa8.8□□□□□ -1
APOB-201ENST00000233242 ATICP31939 592 aa8.8□□□□□ -1
APOB-201ENST00000233242 HNRNPH1P31943 449 aaKnown RBP8.8□□□□□ -1
APOB-201ENST00000233242 FBXW10Q5XX13 1052 aa8.8□□□□□ -1
APOB-201ENST00000233242 ATP11CQ8NB49 1132 aa8.8□□□□□ -1
APOB-201ENST00000233242 RDH13Q8NBN7 331 aa8.8□□□□□ -1
APOB-201ENST00000233242 SNF8Q96H20 258 aa8.8□□□□□ -1
APOB-201ENST00000233242 FAM161BQ96MY7 647 aa8.8□□□□□ -1
APOB-201ENST00000233242 NACC1Q96RE7 527 aa8.8□□□□□ -1
APOB-201ENST00000233242 SAYSD1Q9NPB0 183 aa8.8□□□□□ -1
APOB-201ENST00000233242 WNT8AQ9H1J5 351 aa8.8□□□□□ -1
APOB-201ENST00000233242 CCPG1Q9ULG6 757 aa8.8□□□□□ -1
APOB-201ENST00000233242 ITIH6Q6UXX5 1313 aa8.8□□□□□ -1
APOB-201ENST00000233242 OCRLQ01968 901 aa8.8□□□□□ -1
APOB-201ENST00000233242 CNBD1Q8NA66 436 aa8.8□□□□□ -1
APOB-201ENST00000233242 ATP6V0A1Q93050 837 aa8.8□□□□□ -1
APOB-201ENST00000233242 CCT8L1PA6NM43 557 aa8.8□□□□□ -1
APOB-201ENST00000233242 ANKRD65E5RJM6 399 aa8.8□□□□□ -1
APOB-201ENST00000233242 HSPA4LO95757 839 aa8.8□□□□□ -1
APOB-201ENST00000233242 CFBP00751 764 aa8.8□□□□□ -1
APOB-201ENST00000233242 IQCB1Q15051 598 aa8.8□□□□□ -1
APOB-201ENST00000233242 UNC13DQ70J99 1090 aa8.8□□□□□ -1
APOB-201ENST00000233242 THAP11Q96EK4 314 aa8.8□□□□□ -1
APOB-201ENST00000233242 DBNLQ9UJU6 430 aaKnown RBP8.8□□□□□ -1
APOB-201ENST00000233242 CPSF1Q10570 1443 aaKnown RBP8.8□□□□□ -1
APOB-201ENST00000233242 RNF103-CHMP3A0A140T963 221 aa8.8□□□□□ -1
APOB-201ENST00000233242 KCNA3P22001 575 aa8.8□□□□□ -1
APOB-201ENST00000233242 PGM1P36871 562 aa8.8□□□□□ -1
APOB-201ENST00000233242 XKR9Q5GH70 373 aa8.8□□□□□ -1
APOB-201ENST00000233242 ZBTB18Q99592 522 aa8.8□□□□□ -1
APOB-201ENST00000233242 EMILIN3Q9NT22 766 aa8.8□□□□□ -1
APOB-201ENST00000233242 H0Y626 953 aa8.8□□□□□ -1
APOB-201ENST00000233242 TRIM16O95361 564 aa8.8□□□□□ -1
APOB-201ENST00000233242 MARK3P27448 753 aa8.8□□□□□ -1
APOB-201ENST00000233242 TBCCQ15814 346 aa8.8□□□□□ -1
APOB-201ENST00000233242 DEPDC1BQ8WUY9 529 aa8.8□□□□□ -1
APOB-201ENST00000233242 L2HGDHQ9H9P8 463 aa8.8□□□□□ -1
APOB-201ENST00000233242 PICK1Q9NRD5 415 aa8.8□□□□□ -1
APOB-201ENST00000233242 PLEKHG1Q9ULL1 1385 aa8.8□□□□□ -1
APOB-201ENST00000233242 CAPN9O14815 690 aa8.8□□□□□ -1
APOB-201ENST00000233242 FLOT2Q14254 428 aa8.8□□□□□ -1
APOB-201ENST00000233242 CEP55Q53EZ4 464 aa8.8□□□□□ -1
APOB-201ENST00000233242 ZNF589Q86UQ0 364 aaPredicted RBP8.8□□□□□ -1
APOB-201ENST00000233242 CCDC127Q96BQ5 260 aa8.8□□□□□ -1
APOB-201ENST00000233242 WDR11Q9BZH6 1224 aa8.8□□□□□ -1
APOB-201ENST00000233242 SNX24Q9Y343 169 aa8.8□□□□□ -1
APOB-201ENST00000233242 AK9Q5TCS8 1911 aa8.8□□□□□ -1
APOB-201ENST00000233242 PVALEFA0A1B0GWK0 134 aa8.8□□□□□ -1
APOB-201ENST00000233242 GCP02774 474 aa8.8□□□□□ -1
APOB-201ENST00000233242 MAEAQ7L5Y9 396 aa8.8□□□□□ -1
APOB-201ENST00000233242 EXOC8Q8IYI6 725 aa8.8□□□□□ -1
APOB-201ENST00000233242 TEKT2Q9UIF3 430 aa8.8□□□□□ -1
APOB-201ENST00000233242 A0A1B0GTH6 734 aa8.8□□□□□ -1
APOB-201ENST00000233242 HNRNPRO43390 633 aaKnown RBP8.8□□□□□ -1
APOB-201ENST00000233242 SRGAP2O75044 1071 aa8.8□□□□□ -1
APOB-201ENST00000233242 SERPINI2O75830 405 aa8.8□□□□□ -1
APOB-201ENST00000233242 PCCAP05165 728 aaPredicted RBP8.8□□□□□ -1
APOB-201ENST00000233242 PLCG1P19174 1290 aa8.8□□□□□ -1
APOB-201ENST00000233242 ADRM1Q16186 407 aa8.8□□□□□ -1
APOB-201ENST00000233242 RASGRP2Q7LDG7 609 aa8.8□□□□□ -1
APOB-201ENST00000233242 LRRC59Q96AG4 307 aaKnown RBP8.8□□□□□ -1
APOB-201ENST00000233242 GID8Q9NWU2 228 aa8.8□□□□□ -1
APOB-201ENST00000233242 SNX12Q9UMY4 172 aa8.8□□□□□ -1
APOB-201ENST00000233242 USP27XA6NNY8 438 aa8.8□□□□□ -1
APOB-201ENST00000233242 HNRNPDLO14979 420 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms