RNA–Protein interactions for RNA: ENSMUST00000228044.1

Ldb3-208, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 BASIC

Gene Ldb3, Length 1,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-208ENSMUST00000228044 Lig1P37913 916 aa16.92■□□□□ 0.3
Ldb3-208ENSMUST00000228044 Znf354cQ571J5 560 aa16.92■□□□□ 0.3
Ldb3-208ENSMUST00000228044 Spdye4aQ5IBH6 268 aa16.92■□□□□ 0.3
Ldb3-208ENSMUST00000228044 Tpm4Q6IRU2 248 aa16.92■□□□□ 0.3
Ldb3-208ENSMUST00000228044 Pank4Q80YV4 820 aa16.92■□□□□ 0.3
Ldb3-208ENSMUST00000228044 Trnp1Q80ZI1 223 aa16.92■□□□□ 0.3
Ldb3-208ENSMUST00000228044 Rcor2Q8C796 523 aa16.92■□□□□ 0.3
Ldb3-208ENSMUST00000228044 PpatQ8CIH9 517 aa16.92■□□□□ 0.3
Ldb3-208ENSMUST00000228044 Kiaa0391Q8JZY4 584 aaKnown RBP16.92■□□□□ 0.3
Ldb3-208ENSMUST00000228044 Slc14a1Q8VHL0 384 aa16.92■□□□□ 0.3
Ldb3-208ENSMUST00000228044 Cetn3O35648 167 aa16.91■□□□□ 0.3
Ldb3-208ENSMUST00000228044 Nr2f2P43135 414 aa16.91■□□□□ 0.3
Ldb3-208ENSMUST00000228044 Actr2P61161 394 aa16.91■□□□□ 0.3
Ldb3-208ENSMUST00000228044 Tmem63bQ3TWI9 832 aa16.91■□□□□ 0.3
Ldb3-208ENSMUST00000228044 Dhx37Q6NZL1 1150 aa16.91■□□□□ 0.3
Ldb3-208ENSMUST00000228044 Chtf18Q8BIW9 969 aa16.91■□□□□ 0.3
Ldb3-208ENSMUST00000228044 Sgms1Q8VCQ6 419 aa16.91■□□□□ 0.3
Ldb3-208ENSMUST00000228044 PdgfdQ925I7 370 aa16.91■□□□□ 0.3
Ldb3-208ENSMUST00000228044 Ccdc89Q9DA73 370 aa16.91■□□□□ 0.3
Ldb3-208ENSMUST00000228044 IydQ9DCX8 285 aa16.91■□□□□ 0.3
Ldb3-208ENSMUST00000228044 Btbd19S4R1I0 287 aa16.91■□□□□ 0.3
Ldb3-208ENSMUST00000228044 Myh9Q8VDD5 1960 aaKnown RBP16.91■□□□□ 0.3
Ldb3-208ENSMUST00000228044 Stra6O70491 670 aa16.9■□□□□ 0.3
Ldb3-208ENSMUST00000228044 PklrP53657 574 aa16.9■□□□□ 0.3
Ldb3-208ENSMUST00000228044 Pou2f2Q00196 463 aa16.9■□□□□ 0.3
Ldb3-208ENSMUST00000228044 Ogfod1Q3U0K8 545 aa16.9■□□□□ 0.3
Ldb3-208ENSMUST00000228044 Ankrd13cQ3UX43 541 aa16.9■□□□□ 0.3
Ldb3-208ENSMUST00000228044 Trappc3lQ4KL14 181 aa16.9■□□□□ 0.3
Ldb3-208ENSMUST00000228044 MaeaQ4VC33 396 aa16.9■□□□□ 0.3
Ldb3-208ENSMUST00000228044 Bag1Q60739 355 aa16.9■□□□□ 0.3
Ldb3-208ENSMUST00000228044 Itm2cQ91VK4 269 aa16.9■□□□□ 0.3
Ldb3-208ENSMUST00000228044 Ddx27Q921N6 760 aaKnown RBP16.9■□□□□ 0.3
Ldb3-208ENSMUST00000228044 Rpap3Q9D706 660 aa16.9■□□□□ 0.3
Ldb3-208ENSMUST00000228044 Egfl6Q9JJZ5 550 aa16.9■□□□□ 0.3
Ldb3-208ENSMUST00000228044 Sec14l1A8Y5H7 715 aa16.9■□□□□ 0.3
Ldb3-208ENSMUST00000228044 Ccdc191J3QQ27 883 aa16.9■□□□□ 0.3
Ldb3-208ENSMUST00000228044 Exoc4O35382 975 aa16.9■□□□□ 0.3
Ldb3-208ENSMUST00000228044 Syt2P46097 422 aa16.9■□□□□ 0.3
Ldb3-208ENSMUST00000228044 Ly9Q01965 654 aa16.9■□□□□ 0.3
Ldb3-208ENSMUST00000228044 Znf827Q505G8 1078 aa16.9■□□□□ 0.3
Ldb3-208ENSMUST00000228044 E2f8Q58FA4 860 aa16.9■□□□□ 0.3
Ldb3-208ENSMUST00000228044 E2f7Q6S7F2 904 aa16.9■□□□□ 0.3
Ldb3-208ENSMUST00000228044 PodnQ7TQ62 611 aa16.9■□□□□ 0.3
Ldb3-208ENSMUST00000228044 Ppp2r2cQ8BG02 447 aa16.9■□□□□ 0.3
Ldb3-208ENSMUST00000228044 Dnajc7Q9QYI3 494 aa16.9■□□□□ 0.3
Ldb3-208ENSMUST00000228044 Hebp1Q9R257 190 aa16.9■□□□□ 0.3
Ldb3-208ENSMUST00000228044 Klhdc7aA2APT9 773 aa16.89■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Ccdc121E9Q6D3 323 aa16.89■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Fgd3O88842 733 aa16.89■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Surf1P09925 306 aa16.89■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Frat1P70339 274 aa16.89■□□□□ 0.29
Ldb3-208ENSMUST00000228044 IgflQ6B9Z0 140 aa16.89■□□□□ 0.29
Ldb3-208ENSMUST00000228044 RubcnQ80U62 956 aa16.89■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Ipo5Q8BKC5 1097 aaKnown RBP16.89■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Slc4a7Q8BTY2 1034 aa16.89■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Azin2Q8BVM4 459 aa16.89■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Znf445Q8R2V3 986 aa16.89■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Plod3Q9R0E1 741 aa16.89■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Bub1bQ9Z1S0 1052 aa16.89■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Ttll6A4Q9E8 822 aa16.88■□□□□ 0.29
Ldb3-208ENSMUST00000228044 RaraP11416 462 aa16.88■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Abcd1P48410 736 aa16.88■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Hmgcs2P54869 508 aa16.88■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Zc3h18Q0P678 948 aaKnown RBP16.88■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Slc16a10Q3U9N9 512 aa16.88■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Gm1587Q3UT80 123 aa16.88■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Ecm1Q61508 559 aa16.88■□□□□ 0.29
Ldb3-208ENSMUST00000228044 TfrcQ62351 763 aaKnown RBP16.88■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Cyfip1Q7TMB8 1253 aa16.88■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Arl8aQ8VEH3 186 aa16.88■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Pls3Q99K51 630 aa16.88■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Prg3Q9JL95 222 aa16.88■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Sucla2Q9Z2I9 463 aa16.88■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Col4a3Q9QZS0 1669 aa16.88■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Slc6a16A0A1L1SR47 742 aa16.88■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Serpinb8O08800 374 aaKnown RBP16.88■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Timm44O35857 452 aa16.88■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Cd70O55237 195 aa16.88■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Tarbp2P97473 365 aa16.88■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Mrgprb1Q3UG61 350 aa16.88■□□□□ 0.29
Ldb3-208ENSMUST00000228044 SlmapQ3URD3 845 aa16.88■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Moxd2Q7TT41 619 aa16.88■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Ddx10Q80Y44 875 aaKnown RBP16.88■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Cog5Q8C0L8 829 aa16.88■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Desi2Q9D291 194 aa16.88■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Tube1Q9D6T1 475 aa16.88■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Abcb6Q9DC29 842 aa16.88■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Ercc4Q9QZD4 917 aa16.88■□□□□ 0.29
Ldb3-208ENSMUST00000228044 PrkceP16054 737 aa16.87■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Rpl13P47963 211 aaKnown RBP16.87■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Gpatch11Q3UFS4 262 aa16.87■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Lamb3Q61087 1168 aa16.87■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Mrps31Q61733 384 aaKnown RBP16.87■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Sycp1Q62209 993 aa16.87■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Epn1Q80VP1 575 aa16.87■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Rab11fip4Q8BQP8 635 aa16.87■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Fgd4Q91ZT5 766 aa16.87■□□□□ 0.29
Ldb3-208ENSMUST00000228044 Rwdd2aQ9D9S3 292 aa16.87■□□□□ 0.29
Ldb3-208ENSMUST00000228044 FignQ9ERZ6 759 aa16.87■□□□□ 0.29
Ldb3-208ENSMUST00000228044 DohhA0A1Y7VJ29 135 aa16.86■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 41.9 ms