RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 A0A0G2JMZ2 1700 aa19.33■□□□□ 0.68
PHGDH-234ENST00000642041 TLR3O15455 904 aaKnown RBP19.32■□□□□ 0.68
PHGDH-234ENST00000642041 CCNT1O60563 726 aaKnown RBP19.32■□□□□ 0.68
PHGDH-234ENST00000642041 SLC25A27O95847 323 aa19.32■□□□□ 0.68
PHGDH-234ENST00000642041 MYOGP15173 224 aa19.32■□□□□ 0.68
PHGDH-234ENST00000642041 DSG3P32926 999 aa19.32■□□□□ 0.68
PHGDH-234ENST00000642041 CYP2C18P33260 490 aa19.32■□□□□ 0.68
PHGDH-234ENST00000642041 AMPD3Q01432 767 aa19.32■□□□□ 0.68
PHGDH-234ENST00000642041 ZNF792Q3KQV3 632 aa19.32■□□□□ 0.68
PHGDH-234ENST00000642041 KIAA1755Q5JYT7 1200 aa19.32■□□□□ 0.68
PHGDH-234ENST00000642041 NT5DC1Q5TFE4 455 aa19.32■□□□□ 0.68
PHGDH-234ENST00000642041 OTOP2Q7RTS6 562 aa19.32■□□□□ 0.68
PHGDH-234ENST00000642041 FAM126BQ8IXS8 530 aa19.32■□□□□ 0.68
PHGDH-234ENST00000642041 SLFN12Q8IYM2 578 aa19.32■□□□□ 0.68
PHGDH-234ENST00000642041 C4orf32Q8N8J7 132 aa19.32■□□□□ 0.68
PHGDH-234ENST00000642041 MLKLQ8NB16 471 aa19.32■□□□□ 0.68
PHGDH-234ENST00000642041 CCDC47Q96A33 483 aaKnown RBP19.32■□□□□ 0.68
PHGDH-234ENST00000642041 GSDMAQ96QA5 445 aa19.32■□□□□ 0.68
PHGDH-234ENST00000642041 RANBP17Q9H2T7 1088 aaKnown RBP19.32■□□□□ 0.68
PHGDH-234ENST00000642041 RMND1Q9NWS8 449 aa19.32■□□□□ 0.68
PHGDH-234ENST00000642041 MRVI1Q9Y6F6 885 aa19.32■□□□□ 0.68
PHGDH-234ENST00000642041 BRWD1Q9NSI6 2320 aa19.32■□□□□ 0.68
PHGDH-234ENST00000642041 CYP3A7-CYP3A51PA0A087WV96 503 aa19.31■□□□□ 0.68
PHGDH-234ENST00000642041 A0A0U1RQG5 324 aaPredicted RBP19.31■□□□□ 0.68
PHGDH-234ENST00000642041 VWA3AA6NCI4 1184 aa19.31■□□□□ 0.68
PHGDH-234ENST00000642041 RFXAPO00287 272 aa19.31■□□□□ 0.68
PHGDH-234ENST00000642041 POLR2DO15514 142 aaKnown RBP19.31■□□□□ 0.68
PHGDH-234ENST00000642041 CYP3A7P24462 503 aa19.31■□□□□ 0.68
PHGDH-234ENST00000642041 CST5P28325 142 aaPredicted RBP19.31■□□□□ 0.68
PHGDH-234ENST00000642041 SLC16A2P36021 539 aa19.31■□□□□ 0.68
PHGDH-234ENST00000642041 PPP1R2P41236 205 aa19.31■□□□□ 0.68
PHGDH-234ENST00000642041 LETM2Q2VYF4 491 aa19.31■□□□□ 0.68
PHGDH-234ENST00000642041 EARS2Q5JPH6 523 aaKnown RBP19.31■□□□□ 0.68
PHGDH-234ENST00000642041 PCSK9Q8NBP7 692 aaKnown RBP19.31■□□□□ 0.68
PHGDH-234ENST00000642041 SMARCE1Q969G3 411 aa19.31■□□□□ 0.68
PHGDH-234ENST00000642041 VTI1AQ96AJ9 217 aa19.31■□□□□ 0.68
PHGDH-234ENST00000642041 CLIC6Q96NY7 704 aa19.31■□□□□ 0.68
PHGDH-234ENST00000642041 MMP19Q99542 508 aa19.31■□□□□ 0.68
PHGDH-234ENST00000642041 SLF1Q9BQI6 1058 aa19.31■□□□□ 0.68
PHGDH-234ENST00000642041 CD320Q9NPF0 282 aa19.31■□□□□ 0.68
PHGDH-234ENST00000642041 FAM184BQ9ULE4 1060 aa19.31■□□□□ 0.68
PHGDH-234ENST00000642041 CTDP1Q9Y5B0 961 aaPredicted RBP19.31■□□□□ 0.68
PHGDH-234ENST00000642041 SLC4A7Q9Y6M7 1214 aa19.31■□□□□ 0.68
PHGDH-234ENST00000642041 GOLGA6L6A8MZA4 724 aa19.3■□□□□ 0.68
PHGDH-234ENST00000642041 PGK2P07205 417 aa19.3■□□□□ 0.68
PHGDH-234ENST00000642041 FXR2P51116 673 aaKnown RBP eCLIP19.3■□□□□ 0.684e-8■■■□□ 17.3
PHGDH-234ENST00000642041 POSTNQ15063 836 aa19.3■□□□□ 0.68
PHGDH-234ENST00000642041 ANO6Q4KMQ2 910 aa19.3■□□□□ 0.68
PHGDH-234ENST00000642041 CALML4Q96GE6 196 aa19.3■□□□□ 0.68
PHGDH-234ENST00000642041 KCNH6Q9H252 994 aa19.3■□□□□ 0.68
PHGDH-234ENST00000642041 CPVLQ9H3G5 476 aa19.3■□□□□ 0.68
PHGDH-234ENST00000642041 MYADML2A6NDP7 307 aa19.29■□□□□ 0.68
PHGDH-234ENST00000642041 MARCH6O60337 910 aa19.29■□□□□ 0.68
PHGDH-234ENST00000642041 DUSP11O75319 330 aaKnown RBP19.29■□□□□ 0.68
PHGDH-234ENST00000642041 FLOT1O75955 427 aa19.29■□□□□ 0.68
PHGDH-234ENST00000642041 CD4P01730 458 aa19.29■□□□□ 0.68
PHGDH-234ENST00000642041 ASGR1P07306 291 aa19.29■□□□□ 0.68
PHGDH-234ENST00000642041 OAZ1P54368 228 aa19.29■□□□□ 0.68
PHGDH-234ENST00000642041 JAKMIP3Q5VZ66 844 aa19.29■□□□□ 0.68
PHGDH-234ENST00000642041 GCOM1H8Y6P7 765 aaPredicted RBP19.28■□□□□ 0.68
PHGDH-234ENST00000642041 IKBKBO14920 756 aa19.28■□□□□ 0.68
PHGDH-234ENST00000642041 ZBED4O75132 1171 aa19.28■□□□□ 0.68
PHGDH-234ENST00000642041 CYP3A4P08684 503 aa19.28■□□□□ 0.68
PHGDH-234ENST00000642041 POLR2MP0CAP2 368 aa19.28■□□□□ 0.68
PHGDH-234ENST00000642041 CALCRLQ16602 461 aa19.28■□□□□ 0.68
PHGDH-234ENST00000642041 LONRF3Q496Y0 759 aa19.28■□□□□ 0.68
PHGDH-234ENST00000642041 MSL3Q8N5Y2 521 aaKnown RBP19.28■□□□□ 0.68
PHGDH-234ENST00000642041 KIFC2Q96AC6 838 aa19.28■□□□□ 0.68
PHGDH-234ENST00000642041 ATG4CQ96DT6 458 aa19.28■□□□□ 0.68
PHGDH-234ENST00000642041 PDLIM2Q96JY6 352 aa19.28■□□□□ 0.68
PHGDH-234ENST00000642041 FAM20AQ96MK3 541 aa19.28■□□□□ 0.68
PHGDH-234ENST00000642041 PPP1R9AQ9ULJ8 1098 aa19.28■□□□□ 0.68
PHGDH-234ENST00000642041 CIITAP33076 1130 aa19.27■□□□□ 0.68
PHGDH-234ENST00000642041 KCTD2Q14681 263 aa19.27■□□□□ 0.68
PHGDH-234ENST00000642041 TMEM132BQ14DG7 1078 aa19.27■□□□□ 0.68
PHGDH-234ENST00000642041 RRAGBQ5VZM2 374 aa19.27■□□□□ 0.68
PHGDH-234ENST00000642041 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.27■□□□□ 0.68
PHGDH-234ENST00000642041 RPUSD2Q8IZ73 545 aaKnown RBP19.27■□□□□ 0.68
PHGDH-234ENST00000642041 RASSF8Q8NHQ8 419 aa19.27■□□□□ 0.68
PHGDH-234ENST00000642041 FBXL18Q96ME1 805 aa19.27■□□□□ 0.68
PHGDH-234ENST00000642041 NT5C3AQ9H0P0 336 aa19.27■□□□□ 0.68
PHGDH-234ENST00000642041 HIPK3Q9H422 1215 aa19.27■□□□□ 0.68
PHGDH-234ENST00000642041 STK17AQ9UEE5 414 aa19.27■□□□□ 0.68
PHGDH-234ENST00000642041 ICAM1P05362 532 aa19.26■□□□□ 0.67
PHGDH-234ENST00000642041 C6orf222P0C671 652 aaPredicted RBP19.26■□□□□ 0.67
PHGDH-234ENST00000642041 ATP2A2P16615 1042 aaKnown RBP19.26■□□□□ 0.67
PHGDH-234ENST00000642041 GHRHRQ02643 423 aa19.26■□□□□ 0.67
PHGDH-234ENST00000642041 TKFCQ3LXA3 575 aa19.26■□□□□ 0.67
PHGDH-234ENST00000642041 Q4G0T1 1027 aa19.26■□□□□ 0.67
PHGDH-234ENST00000642041 KRT79Q5XKE5 535 aa19.26■□□□□ 0.67
PHGDH-234ENST00000642041 RNF214Q8ND24 703 aa19.26■□□□□ 0.67
PHGDH-234ENST00000642041 SPATA20Q8TB22 786 aa19.26■□□□□ 0.67
PHGDH-234ENST00000642041 RASGRP4Q8TDF6 673 aa19.26■□□□□ 0.67
PHGDH-234ENST00000642041 MBOAT7Q96N66 472 aa19.26■□□□□ 0.67
PHGDH-234ENST00000642041 MTMR9Q96QG7 549 aa19.26■□□□□ 0.67
PHGDH-234ENST00000642041 UIMC1Q96RL1 719 aa19.26■□□□□ 0.67
PHGDH-234ENST00000642041 ANO3Q9BYT9 981 aa19.26■□□□□ 0.67
PHGDH-234ENST00000642041 SPC25Q9HBM1 224 aa19.26■□□□□ 0.67
PHGDH-234ENST00000642041 CACNA1AO00555 2505 aa19.26■□□□□ 0.67
PHGDH-234ENST00000642041 KDM3AQ9Y4C1 1321 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms