RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 GAP43P17677 238 aa7.36□□□□□ -1.23
RTTN-215ENST00000639487 FECHP22830 423 aa7.36□□□□□ -1.23
RTTN-215ENST00000639487 METAP2P50579 478 aaKnown RBP eCLIP7.36□□□□□ -1.23
RTTN-215ENST00000639487 AP3M2P53677 418 aa7.36□□□□□ -1.23
RTTN-215ENST00000639487 SMARCB1Q12824 385 aa7.36□□□□□ -1.23
RTTN-215ENST00000639487 ADCK5Q3MIX3 580 aa7.36□□□□□ -1.23
RTTN-215ENST00000639487 ACBD5Q5T8D3 534 aaPredicted RBP7.36□□□□□ -1.23
RTTN-215ENST00000639487 ZPBP2Q6X784 338 aa7.36□□□□□ -1.23
RTTN-215ENST00000639487 CCDC73Q6ZRK6 1079 aa7.36□□□□□ -1.23
RTTN-215ENST00000639487 Q6ZUG5 572 aa7.36□□□□□ -1.23
RTTN-215ENST00000639487 ARCQ7LC44 396 aa7.36□□□□□ -1.23
RTTN-215ENST00000639487 TCP11Q8WWU5 503 aa7.36□□□□□ -1.23
RTTN-215ENST00000639487 KBTBD4Q9NVX7 518 aa7.36□□□□□ -1.23
RTTN-215ENST00000639487 TSPY2A6NKD2 308 aa7.36□□□□□ -1.23
RTTN-215ENST00000639487 P4HA2O15460 535 aa7.36□□□□□ -1.23
RTTN-215ENST00000639487 NUCB2P80303 420 aa7.36□□□□□ -1.23
RTTN-215ENST00000639487 MDM2Q00987 491 aaPredicted RBP7.36□□□□□ -1.23
RTTN-215ENST00000639487 ME3Q16798 604 aa7.36□□□□□ -1.23
RTTN-215ENST00000639487 CEP55Q53EZ4 464 aa7.36□□□□□ -1.23
RTTN-215ENST00000639487 C19orf43Q9BQ61 176 aa7.36□□□□□ -1.23
RTTN-215ENST00000639487 MKNK1Q9BUB5 465 aa7.36□□□□□ -1.23
RTTN-215ENST00000639487 UMODL1Q5DID0 1318 aa7.35□□□□□ -1.23
RTTN-215ENST00000639487 CCDC69A6NI79 296 aa7.35□□□□□ -1.23
RTTN-215ENST00000639487 HBP1O60381 514 aa7.35□□□□□ -1.23
RTTN-215ENST00000639487 GRK4P32298 578 aa7.35□□□□□ -1.23
RTTN-215ENST00000639487 SLC1A4P43007 532 aa7.35□□□□□ -1.23
RTTN-215ENST00000639487 SLC39A14Q15043 492 aa7.35□□□□□ -1.23
RTTN-215ENST00000639487 PLEKHG4Q58EX7 1191 aa7.35□□□□□ -1.23
RTTN-215ENST00000639487 FAM83BQ5T0W9 1011 aa7.35□□□□□ -1.23
RTTN-215ENST00000639487 ZNF598Q86UK7 904 aaKnown RBP7.35□□□□□ -1.23
RTTN-215ENST00000639487 NOSTRINQ8IVI9 506 aa7.35□□□□□ -1.23
RTTN-215ENST00000639487 ATP8B4Q8TF62 1192 aa7.35□□□□□ -1.23
RTTN-215ENST00000639487 PCYT2Q99447 389 aa7.35□□□□□ -1.23
RTTN-215ENST00000639487 ANO3Q9BYT9 981 aa7.35□□□□□ -1.23
RTTN-215ENST00000639487 SMARCAD1Q9H4L7 1026 aa7.35□□□□□ -1.23
RTTN-215ENST00000639487 KCND1Q9NSA2 647 aa7.35□□□□□ -1.23
RTTN-215ENST00000639487 RNF146Q9NTX7 359 aa7.35□□□□□ -1.23
RTTN-215ENST00000639487 CLUHO75153 1309 aa7.35□□□□□ -1.23
RTTN-215ENST00000639487 ADORA2AP29274 412 aa7.35□□□□□ -1.23
RTTN-215ENST00000639487 CACNB2Q08289 660 aaPredicted RBP7.35□□□□□ -1.23
RTTN-215ENST00000639487 MTA1Q13330 715 aa7.35□□□□□ -1.23
RTTN-215ENST00000639487 TAF1CQ15572 869 aaPredicted RBP7.35□□□□□ -1.23
RTTN-215ENST00000639487 SLC39A5Q6ZMH5 540 aa7.35□□□□□ -1.23
RTTN-215ENST00000639487 RNF207Q6ZRF8 634 aa7.35□□□□□ -1.23
RTTN-215ENST00000639487 SPRYD3Q8NCJ5 442 aa7.35□□□□□ -1.23
RTTN-215ENST00000639487 C2orf15Q8WU43 125 aaKnown RBP7.35□□□□□ -1.23
RTTN-215ENST00000639487 HAS1Q92839 578 aa7.35□□□□□ -1.23
RTTN-215ENST00000639487 FIZ1Q96SL8 496 aa7.35□□□□□ -1.23
RTTN-215ENST00000639487 C2orf40Q9H1Z8 148 aa7.35□□□□□ -1.23
RTTN-215ENST00000639487 ERVK-5Q9HDB9 667 aa7.35□□□□□ -1.23
RTTN-215ENST00000639487 RGS18Q9NS28 235 aa7.35□□□□□ -1.23
RTTN-215ENST00000639487 FLRT1Q9NZU1 646 aa7.35□□□□□ -1.23
RTTN-215ENST00000639487 COL20A1Q9P218 1284 aa7.35□□□□□ -1.23
RTTN-215ENST00000639487 ABHD14A-ACY1A0A1B0GW23 586 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 GSTTP1A0A1W2PQM5 241 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 GTPBP10A4D1E9 387 aaKnown RBP7.34□□□□□ -1.23
RTTN-215ENST00000639487 SNAP23O00161 211 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 TIMP1P01033 207 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 EDN1P05305 212 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 KCNE1P15382 129 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 ERCC3P19447 782 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 SCNN1AP37088 669 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 NBPF20Q3BBV1 942 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 FAM160B1Q5W0V3 765 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 TRIM22Q8IYM9 498 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 BEST2Q8NFU1 509 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 JARID2Q92833 1246 aaPredicted RBP7.34□□□□□ -1.23
RTTN-215ENST00000639487 C11orf49Q9H6J7 331 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 TRPV5Q9NQA5 729 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 TUBE1Q9UJT0 475 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 MYO6Q9UM54 1294 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 GPR32O75388 356 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 ERBB2P04626 1255 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 MARCH8Q5T0T0 291 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 KANK3Q6NY19 840 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 CNKSR3Q6P9H4 555 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 PSRC1Q6PGN9 363 aaPredicted RBP7.34□□□□□ -1.23
RTTN-215ENST00000639487 CWC27Q6UX04 472 aaKnown RBP7.34□□□□□ -1.23
RTTN-215ENST00000639487 NEK8Q86SG6 692 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 TTC39CQ8N584 583 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 SYT2Q8N9I0 419 aaPredicted RBP7.34□□□□□ -1.23
RTTN-215ENST00000639487 KCNG4Q8TDN1 519 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 ATG4CQ96DT6 458 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 DYNLL2Q96FJ2 89 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 FEZ1Q99689 392 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 HTATIP2Q9BUP3 242 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 DMAC2Q9NW81 257 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 FNIP2Q9P278 1114 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 FBXO2Q9UK22 296 aaPredicted RBP7.34□□□□□ -1.23
RTTN-215ENST00000639487 NOTCH4Q99466 2003 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 UBE2Q2LH0YL09 131 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 SLC16A3O15427 465 aaKnown RBP7.34□□□□□ -1.23
RTTN-215ENST00000639487 C22orf31O95567 290 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 EYA4O95677 639 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 CYP11A1P05108 521 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 RFX1P22670 979 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 PLCB3Q01970 1234 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 CTDSPL2Q05D32 466 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 PPP2R3AQ06190 1150 aa7.34□□□□□ -1.23
RTTN-215ENST00000639487 CHAF1AQ13111 956 aaPredicted RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms