RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 HTRA4P83105 476 aaPredicted RBP22.92■■□□□ 1.26
CLN6-222ENST00000637667 RSPH3Q86UC2 560 aa22.92■■□□□ 1.26
CLN6-222ENST00000637667 APBB2Q92870 758 aa22.92■■□□□ 1.26
CLN6-222ENST00000637667 IFIH1Q9BYX4 1025 aaKnown RBP22.92■■□□□ 1.26
CLN6-222ENST00000637667 AZI2Q9H6S1 392 aa22.92■■□□□ 1.26
CLN6-222ENST00000637667 AGO4Q9HCK5 861 aaKnown RBP22.92■■□□□ 1.26
CLN6-222ENST00000637667 KAT6AQ92794 2004 aa22.91■■□□□ 1.26
CLN6-222ENST00000637667 REC8O95072 547 aa22.91■■□□□ 1.26
CLN6-222ENST00000637667 ACTR2P61160 394 aa22.91■■□□□ 1.26
CLN6-222ENST00000637667 ITGB3BPQ13352 177 aaPredicted RBP22.91■■□□□ 1.26
CLN6-222ENST00000637667 MARCH8Q5T0T0 291 aa22.91■■□□□ 1.26
CLN6-222ENST00000637667 IL27Q8NEV9 243 aa22.91■■□□□ 1.26
CLN6-222ENST00000637667 SUGCTQ9HAC7 445 aa22.91■■□□□ 1.26
CLN6-222ENST00000637667 BRWD1Q9NSI6 2320 aa22.91■■□□□ 1.26
CLN6-222ENST00000637667 MICAL3Q7RTP6 2002 aa22.91■■□□□ 1.26
CLN6-222ENST00000637667 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.9■■□□□ 1.26
CLN6-222ENST00000637667 RRN3P2A6NIE6 340 aa22.9■■□□□ 1.26
CLN6-222ENST00000637667 GHRP10912 638 aa22.9■■□□□ 1.26
CLN6-222ENST00000637667 INSRRP14616 1297 aa22.9■■□□□ 1.26
CLN6-222ENST00000637667 RPS6KB1P23443 525 aa22.9■■□□□ 1.26
CLN6-222ENST00000637667 ZNF76P36508 570 aa22.9■■□□□ 1.26
CLN6-222ENST00000637667 IGBP1P78318 339 aa22.9■■□□□ 1.26
CLN6-222ENST00000637667 TFF2Q03403 129 aa22.9■■□□□ 1.26
CLN6-222ENST00000637667 JAKMIP3Q5VZ66 844 aa22.9■■□□□ 1.26
CLN6-222ENST00000637667 FBXL16Q8N461 479 aa22.9■■□□□ 1.26
CLN6-222ENST00000637667 SP7Q8TDD2 431 aaPredicted RBP22.9■■□□□ 1.26
CLN6-222ENST00000637667 ADAMTS19Q8TE59 1207 aa22.9■■□□□ 1.26
CLN6-222ENST00000637667 TOP1MTQ969P6 601 aa22.9■■□□□ 1.26
CLN6-222ENST00000637667 LMCD1Q9NZU5 365 aa22.9■■□□□ 1.26
CLN6-222ENST00000637667 NID2Q14112 1375 aa22.89■■□□□ 1.26
CLN6-222ENST00000637667 ESYT2A0FGR8 921 aa22.89■■□□□ 1.25
CLN6-222ENST00000637667 MGAT3Q09327 533 aa22.89■■□□□ 1.25
CLN6-222ENST00000637667 AAK1Q2M2I8 961 aa22.89■■□□□ 1.25
CLN6-222ENST00000637667 NIPA1Q7RTP0 329 aa22.89■■□□□ 1.25
CLN6-222ENST00000637667 DNAJB3Q8WWF6 145 aa22.89■■□□□ 1.25
CLN6-222ENST00000637667 YME1L1Q96TA2 773 aa22.89■■□□□ 1.25
CLN6-222ENST00000637667 AGXT2Q9BYV1 514 aa22.89■■□□□ 1.25
CLN6-222ENST00000637667 TRPC6Q9Y210 931 aa22.89■■□□□ 1.25
CLN6-222ENST00000637667 BDP1A6H8Y1 2624 aa22.88■■□□□ 1.25
CLN6-222ENST00000637667 TNFRSF10AO00220 468 aa22.88■■□□□ 1.25
CLN6-222ENST00000637667 PRPF3O43395 683 aaKnown RBP22.88■■□□□ 1.25
CLN6-222ENST00000637667 UPP2O95045 317 aa22.88■■□□□ 1.25
CLN6-222ENST00000637667 PSMA5P28066 241 aa22.88■■□□□ 1.25
CLN6-222ENST00000637667 STAT5BP51692 787 aa22.88■■□□□ 1.25
CLN6-222ENST00000637667 LPIN1Q14693 890 aa22.88■■□□□ 1.25
CLN6-222ENST00000637667 PLCB4Q15147 1175 aa22.88■■□□□ 1.25
CLN6-222ENST00000637667 PKN1Q16512 942 aa22.88■■□□□ 1.25
CLN6-222ENST00000637667 PLPPR4Q7Z2D5 763 aa22.88■■□□□ 1.25
CLN6-222ENST00000637667 CCDC12Q8WUD4 166 aaPredicted RBP22.88■■□□□ 1.25
CLN6-222ENST00000637667 TNPO1Q92973 898 aaKnown RBP22.88■■□□□ 1.25
CLN6-222ENST00000637667 ZBTB10Q96DT7 871 aa22.88■■□□□ 1.25
CLN6-222ENST00000637667 C17orf80Q9BSJ5 609 aa22.88■■□□□ 1.25
CLN6-222ENST00000637667 ZMYND12Q9H0C1 365 aa22.88■■□□□ 1.25
CLN6-222ENST00000637667 COG5Q9UP83 839 aa22.88■■□□□ 1.25
CLN6-222ENST00000637667 FAM86B1E9PN63 330 aa22.87■■□□□ 1.25
CLN6-222ENST00000637667 RPLP2P05387 115 aaKnown RBP22.87■■□□□ 1.25
CLN6-222ENST00000637667 FAM86B2P0C5J1 330 aa22.87■■□□□ 1.25
CLN6-222ENST00000637667 PLA2G4DQ86XP0 818 aa22.87■■□□□ 1.25
CLN6-222ENST00000637667 FBXO22Q8NEZ5 403 aa22.87■■□□□ 1.25
CLN6-222ENST00000637667 CRYGNQ8WXF5 182 aa22.87■■□□□ 1.25
CLN6-222ENST00000637667 UHRF1Q96T88 793 aaPredicted RBP22.87■■□□□ 1.25
CLN6-222ENST00000637667 FAM49AQ9H0Q0 323 aaPredicted RBP22.87■■□□□ 1.25
CLN6-222ENST00000637667 C6orf50Q9HD87 102 aa22.87■■□□□ 1.25
CLN6-222ENST00000637667 CDY2AQ9Y6F7 541 aa22.87■■□□□ 1.25
CLN6-222ENST00000637667 REV3LO60673 3130 aa22.86■■□□□ 1.25
CLN6-222ENST00000637667 ADAMTS3O15072 1205 aa22.86■■□□□ 1.25
CLN6-222ENST00000637667 ATG7O95352 703 aa22.86■■□□□ 1.25
CLN6-222ENST00000637667 CCNE2O96020 404 aa22.86■■□□□ 1.25
CLN6-222ENST00000637667 CYP3A4P08684 503 aa22.86■■□□□ 1.25
CLN6-222ENST00000637667 BMP1P13497 986 aa22.86■■□□□ 1.25
CLN6-222ENST00000637667 MRPS6P82932 125 aaKnown RBP22.86■■□□□ 1.25
CLN6-222ENST00000637667 AKAP17AQ02040 695 aaKnown RBP22.86■■□□□ 1.25
CLN6-222ENST00000637667 FBXO47Q5MNV8 452 aa22.86■■□□□ 1.25
CLN6-222ENST00000637667 MCTP2Q6DN12 878 aa22.86■■□□□ 1.25
CLN6-222ENST00000637667 REXO1Q8N1G1 1221 aaKnown RBP22.86■■□□□ 1.25
CLN6-222ENST00000637667 PHKBQ93100 1093 aa22.86■■□□□ 1.25
CLN6-222ENST00000637667 COL4A4P53420 1690 aaPredicted RBP22.85■■□□□ 1.25
CLN6-222ENST00000637667 DDX39AO00148 427 aaKnown RBP22.85■■□□□ 1.25
CLN6-222ENST00000637667 SLC26A2P50443 739 aa22.85■■□□□ 1.25
CLN6-222ENST00000637667 TRAPPC12Q8WVT3 735 aa22.85■■□□□ 1.25
CLN6-222ENST00000637667 HLA-CQ95604 372 aa22.85■■□□□ 1.25
CLN6-222ENST00000637667 SAMD11Q96NU1 681 aa22.85■■□□□ 1.25
CLN6-222ENST00000637667 PCDHA2Q9Y5H9 948 aa22.85■■□□□ 1.25
CLN6-222ENST00000637667 IGLV3-22A0A075B6J6 115 aa22.84■■□□□ 1.25
CLN6-222ENST00000637667 IGKV6D-21A0A0A0MT36 114 aa22.84■■□□□ 1.25
CLN6-222ENST00000637667 POTEB3A0JP26 581 aa22.84■■□□□ 1.25
CLN6-222ENST00000637667 BACH1O14867 736 aa22.84■■□□□ 1.25
CLN6-222ENST00000637667 GNA11P29992 359 aa22.84■■□□□ 1.25
CLN6-222ENST00000637667 KCNQ1P51787 676 aa22.84■■□□□ 1.25
CLN6-222ENST00000637667 EVCP57679 992 aa22.84■■□□□ 1.25
CLN6-222ENST00000637667 NTRK3Q16288 839 aa22.84■■□□□ 1.25
CLN6-222ENST00000637667 IER5Q5VY09 327 aa22.84■■□□□ 1.25
CLN6-222ENST00000637667 POTEBQ6S5H4 581 aa22.84■■□□□ 1.25
CLN6-222ENST00000637667 ABHD15Q6UXT9 468 aa22.84■■□□□ 1.25
CLN6-222ENST00000637667 TSHZ1Q6ZSZ6 1077 aa22.84■■□□□ 1.25
CLN6-222ENST00000637667 RNF26Q9BY78 433 aaPredicted RBP22.84■■□□□ 1.25
CLN6-222ENST00000637667 IPO5O00410 1097 aaKnown RBP22.83■■□□□ 1.25
CLN6-222ENST00000637667 DHX15O43143 795 aaKnown RBP22.83■■□□□ 1.25
CLN6-222ENST00000637667 EPB41L2O43491 1005 aaKnown RBP22.83■■□□□ 1.25
CLN6-222ENST00000637667 PPFIA3O75145 1194 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms