RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 EBF2Q9HAK2 575 aa10.63□□□□□ -0.71
TNFAIP3-210ENST00000620204 KLHL14Q9P2G3 628 aa10.63□□□□□ -0.71
TNFAIP3-210ENST00000620204 CORO1CQ9ULV4 474 aaPredicted RBP10.63□□□□□ -0.71
TNFAIP3-210ENST00000620204 C2CD2Q9Y426 696 aa10.63□□□□□ -0.71
TNFAIP3-210ENST00000620204 XIRP1Q702N8 1843 aaKnown RBP10.63□□□□□ -0.71
TNFAIP3-210ENST00000620204 WDR19Q8NEZ3 1342 aa10.63□□□□□ -0.71
TNFAIP3-210ENST00000620204 LOC102724428A0A0B4J2F2 783 aa10.63□□□□□ -0.71
TNFAIP3-210ENST00000620204 SIK1P57059 783 aa10.63□□□□□ -0.71
TNFAIP3-210ENST00000620204 ASIC2Q16515 512 aa10.63□□□□□ -0.71
TNFAIP3-210ENST00000620204 TSNAXIP1Q2TAA8 658 aa10.63□□□□□ -0.71
TNFAIP3-210ENST00000620204 PAGR1Q9BTK6 254 aa10.63□□□□□ -0.71
TNFAIP3-210ENST00000620204 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.63□□□□□ -0.71
TNFAIP3-210ENST00000620204 FAM208AQ9UK61 1670 aaKnown RBP10.63□□□□□ -0.71
TNFAIP3-210ENST00000620204 GHRP10912 638 aa10.63□□□□□ -0.71
TNFAIP3-210ENST00000620204 FGFR4P22455 802 aa10.63□□□□□ -0.71
TNFAIP3-210ENST00000620204 RFC5P40937 340 aa10.63□□□□□ -0.71
TNFAIP3-210ENST00000620204 AMPD3Q01432 767 aa10.63□□□□□ -0.71
TNFAIP3-210ENST00000620204 SLC29A2Q14542 456 aa10.63□□□□□ -0.71
TNFAIP3-210ENST00000620204 LACTB2Q53H82 288 aaPredicted RBP10.63□□□□□ -0.71
TNFAIP3-210ENST00000620204 FAM83BQ5T0W9 1011 aa10.63□□□□□ -0.71
TNFAIP3-210ENST00000620204 NEK9Q8TD19 979 aa10.63□□□□□ -0.71
TNFAIP3-210ENST00000620204 CALML4Q96GE6 196 aa10.63□□□□□ -0.71
TNFAIP3-210ENST00000620204 NUDCD1Q96RS6 583 aa10.63□□□□□ -0.71
TNFAIP3-210ENST00000620204 PHF20Q9BVI0 1012 aa10.63□□□□□ -0.71
TNFAIP3-210ENST00000620204 TMEM60Q9H2L4 133 aa10.63□□□□□ -0.71
TNFAIP3-210ENST00000620204 INTUQ9ULD6 942 aa10.63□□□□□ -0.71
TNFAIP3-210ENST00000620204 PTPN22Q9Y2R2 807 aa10.63□□□□□ -0.71
TNFAIP3-210ENST00000620204 CACNA1FO60840 1977 aa10.63□□□□□ -0.71
TNFAIP3-210ENST00000620204 PHRF1Q9P1Y6 1649 aaKnown RBP10.62□□□□□ -0.71
TNFAIP3-210ENST00000620204 A0A1B0GVG6 124 aa10.62□□□□□ -0.71
TNFAIP3-210ENST00000620204 CETN3O15182 167 aa10.62□□□□□ -0.71
TNFAIP3-210ENST00000620204 KRT18P05783 430 aaKnown RBP10.62□□□□□ -0.71
TNFAIP3-210ENST00000620204 LONP1P36776 959 aaKnown RBP10.62□□□□□ -0.71
TNFAIP3-210ENST00000620204 RAB27AP51159 221 aa10.62□□□□□ -0.71
TNFAIP3-210ENST00000620204 PDE6CP51160 858 aa10.62□□□□□ -0.71
TNFAIP3-210ENST00000620204 UBE3CQ15386 1083 aa10.62□□□□□ -0.71
TNFAIP3-210ENST00000620204 MAN2A1Q16706 1144 aa10.62□□□□□ -0.71
TNFAIP3-210ENST00000620204 ERMARDQ5T6L9 678 aa10.62□□□□□ -0.71
TNFAIP3-210ENST00000620204 RNF220Q5VTB9 566 aa10.62□□□□□ -0.71
TNFAIP3-210ENST00000620204 ZNF513Q8N8E2 541 aaPredicted RBP10.62□□□□□ -0.71
TNFAIP3-210ENST00000620204 UBA5Q9GZZ9 404 aa10.62□□□□□ -0.71
TNFAIP3-210ENST00000620204 HOMER3Q9NSC5 361 aa10.62□□□□□ -0.71
TNFAIP3-210ENST00000620204 AFF2P51816 1311 aa10.62□□□□□ -0.71
TNFAIP3-210ENST00000620204 LINGO3P0C6S8 592 aa10.62□□□□□ -0.71
TNFAIP3-210ENST00000620204 STX2P32856 288 aa10.62□□□□□ -0.71
TNFAIP3-210ENST00000620204 AGBL2Q5U5Z8 902 aa10.62□□□□□ -0.71
TNFAIP3-210ENST00000620204 CDCA2Q69YH5 1023 aaPredicted RBP10.62□□□□□ -0.71
TNFAIP3-210ENST00000620204 CNNM4Q6P4Q7 775 aa10.62□□□□□ -0.71
TNFAIP3-210ENST00000620204 CRELD2Q6UXH1 353 aaPredicted RBP10.62□□□□□ -0.71
TNFAIP3-210ENST00000620204 MREGQ8N565 214 aa10.62□□□□□ -0.71
TNFAIP3-210ENST00000620204 RPS6KC1Q96S38 1066 aa10.62□□□□□ -0.71
TNFAIP3-210ENST00000620204 VCXQ9H320 206 aa10.62□□□□□ -0.71
TNFAIP3-210ENST00000620204 PICK1Q9NRD5 415 aa10.62□□□□□ -0.71
TNFAIP3-210ENST00000620204 GSG1L2A8MUP6 293 aa10.62□□□□□ -0.71
TNFAIP3-210ENST00000620204 FOXO6A8MYZ6 492 aa10.62□□□□□ -0.71
TNFAIP3-210ENST00000620204 F8VZ95 297 aa10.62□□□□□ -0.71
TNFAIP3-210ENST00000620204 CCNT1O60563 726 aaKnown RBP10.62□□□□□ -0.71
TNFAIP3-210ENST00000620204 ACSL3O95573 720 aa10.62□□□□□ -0.71
TNFAIP3-210ENST00000620204 PCCAP05165 728 aaPredicted RBP10.62□□□□□ -0.71
TNFAIP3-210ENST00000620204 FERP16591 822 aa10.62□□□□□ -0.71
TNFAIP3-210ENST00000620204 CNGA1P29973 690 aa10.62□□□□□ -0.71
TNFAIP3-210ENST00000620204 COPS2P61201 443 aa10.62□□□□□ -0.71
TNFAIP3-210ENST00000620204 ICA1Q05084 483 aa10.62□□□□□ -0.71
TNFAIP3-210ENST00000620204 SETDB1Q15047 1291 aa10.62□□□□□ -0.71
TNFAIP3-210ENST00000620204 PKN1Q16512 942 aa10.62□□□□□ -0.71
TNFAIP3-210ENST00000620204 IFI16Q16666 785 aaKnown RBP10.62□□□□□ -0.71
TNFAIP3-210ENST00000620204 GIMAP8Q8ND71 665 aaPredicted RBP10.62□□□□□ -0.71
TNFAIP3-210ENST00000620204 EPS8L3Q8TE67 593 aaKnown RBP10.62□□□□□ -0.71
TNFAIP3-210ENST00000620204 ANKS1AQ92625 1134 aa10.62□□□□□ -0.71
TNFAIP3-210ENST00000620204 NIP7Q9Y221 180 aaKnown RBP eCLIP10.62□□□□□ -0.71
TNFAIP3-210ENST00000620204 DAAM1Q9Y4D1 1078 aa10.62□□□□□ -0.71
TNFAIP3-210ENST00000620204 TSPY2A6NKD2 308 aa10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 SCG2P13521 617 aa10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 PRPHP41219 470 aa10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 CRKLP46109 303 aaKnown RBP10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 NCALDP61601 193 aa10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 BLMHQ13867 455 aa10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 GRIPAP1Q4V328 841 aa10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 MIIPQ5JXC2 388 aa10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 PDXDC1Q6P996 788 aa10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 ZC3H18Q86VM9 953 aaKnown RBP10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 BLIDQ8IZY5 108 aa10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 METTL13Q8N6R0 699 aa10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 ENAHQ8N8S7 591 aaPredicted RBP10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 GBP5Q96PP8 586 aa10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 ERGIC2Q96RQ1 377 aa10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 TTYH3Q9C0H2 523 aa10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 GREM2Q9H772 168 aa10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 USP15Q9Y4E8 981 aaPredicted RBP10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 MAP3K15Q6ZN16 1313 aa10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 RASGRF2O14827 1237 aa10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 ADAMTS3O15072 1205 aa10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 CACNB1Q02641 598 aaPredicted RBP10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 PDCD2Q16342 344 aaPredicted RBP10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 RFX8Q6ZV50 586 aa10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 SYCP3Q8IZU3 236 aa10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 U2AF1L4Q8WU68 220 aaKnown RBP10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 EZH1Q92800 747 aaPredicted RBP10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 TMEM237Q96Q45 408 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms