RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 GHRP10912 638 aa21.67■■□□□ 1.06
CDX1-202ENST00000616154 MARK3P27448 753 aa21.67■■□□□ 1.06
CDX1-202ENST00000616154 FUT2Q10981 343 aa21.67■■□□□ 1.06
CDX1-202ENST00000616154 SYNE3Q6ZMZ3 975 aa21.67■■□□□ 1.06
CDX1-202ENST00000616154 RSPH3Q86UC2 560 aa21.67■■□□□ 1.06
CDX1-202ENST00000616154 TMEM192Q8IY95 271 aa21.67■■□□□ 1.06
CDX1-202ENST00000616154 AGXT2Q9BYV1 514 aa21.67■■□□□ 1.06
CDX1-202ENST00000616154 ATG2AQ2TAZ0 1938 aa21.67■■□□□ 1.06
CDX1-202ENST00000616154 NID2Q14112 1375 aa21.66■■□□□ 1.06
CDX1-202ENST00000616154 LPIN1Q14693 890 aa21.66■■□□□ 1.06
CDX1-202ENST00000616154 LEXMQ3ZCV2 418 aa21.66■■□□□ 1.06
CDX1-202ENST00000616154 TIGD5Q53EQ6 642 aa21.66■■□□□ 1.06
CDX1-202ENST00000616154 MARCH8Q5T0T0 291 aa21.66■■□□□ 1.06
CDX1-202ENST00000616154 WWC2Q6AWC2 1192 aa21.66■■□□□ 1.06
CDX1-202ENST00000616154 PPP1R18Q6NYC8 613 aa21.66■■□□□ 1.06
CDX1-202ENST00000616154 TCEANC2Q96MN5 208 aa21.66■■□□□ 1.06
CDX1-202ENST00000616154 JPH1Q9HDC5 661 aaPredicted RBP21.66■■□□□ 1.06
CDX1-202ENST00000616154 LOXHD1Q8IVV2 1947 aa21.66■■□□□ 1.06
CDX1-202ENST00000616154 ZBTB43O43298 467 aa21.65■■□□□ 1.06
CDX1-202ENST00000616154 RPLP2P05387 115 aaKnown RBP21.65■■□□□ 1.06
CDX1-202ENST00000616154 GPM6BQ13491 265 aa21.65■■□□□ 1.06
CDX1-202ENST00000616154 IL17RAQ96F46 866 aa21.65■■□□□ 1.06
CDX1-202ENST00000616154 MXRA8Q9BRK3 442 aa21.65■■□□□ 1.06
CDX1-202ENST00000616154 RIC8AQ9NPQ8 531 aa21.65■■□□□ 1.06
CDX1-202ENST00000616154 RAPGEFL1Q9UHV5 662 aa21.65■■□□□ 1.06
CDX1-202ENST00000616154 MYO7AQ13402 2215 aa21.65■■□□□ 1.06
CDX1-202ENST00000616154 RRN3P2A6NIE6 340 aa21.64■■□□□ 1.05
CDX1-202ENST00000616154 KCNA5P22460 613 aa21.64■■□□□ 1.05
CDX1-202ENST00000616154 NAPAP54920 295 aa21.64■■□□□ 1.05
CDX1-202ENST00000616154 FBXO47Q5MNV8 452 aa21.64■■□□□ 1.05
CDX1-202ENST00000616154 TYW1BQ6NUM6 668 aa21.64■■□□□ 1.05
CDX1-202ENST00000616154 DNAJB3Q8WWF6 145 aa21.64■■□□□ 1.05
CDX1-202ENST00000616154 JAKMIP1Q96N16 626 aaKnown RBP21.64■■□□□ 1.05
CDX1-202ENST00000616154 PCYT2Q99447 389 aa21.64■■□□□ 1.05
CDX1-202ENST00000616154 KCNH7Q9NS40 1196 aa21.64■■□□□ 1.05
CDX1-202ENST00000616154 FAM217BQ9NTX9 383 aaPredicted RBP21.64■■□□□ 1.05
CDX1-202ENST00000616154 SLC9A2Q9UBY0 812 aa21.64■■□□□ 1.05
CDX1-202ENST00000616154 NFASCO94856 1347 aa21.64■■□□□ 1.05
CDX1-202ENST00000616154 RTN1Q16799 776 aa21.63■■□□□ 1.05
CDX1-202ENST00000616154 TSHZ1Q6ZSZ6 1077 aa21.63■■□□□ 1.05
CDX1-202ENST00000616154 FIBCD1Q8N539 461 aa21.63■■□□□ 1.05
CDX1-202ENST00000616154 BANK1Q8NDB2 785 aa21.63■■□□□ 1.05
CDX1-202ENST00000616154 EPHX3Q9H6B9 360 aa21.63■■□□□ 1.05
CDX1-202ENST00000616154 RC3H2Q9HBD1 1191 aaKnown RBP21.63■■□□□ 1.05
CDX1-202ENST00000616154 CDY2AQ9Y6F7 541 aa21.63■■□□□ 1.05
CDX1-202ENST00000616154 KLF18A0A0U1RQI7 1052 aa21.62■■□□□ 1.05
CDX1-202ENST00000616154 hCG_1984214I3L0E3 225 aa21.62■■□□□ 1.05
CDX1-202ENST00000616154 ENPP3O14638 875 aa21.62■■□□□ 1.05
CDX1-202ENST00000616154 FOSP01100 380 aaPredicted RBP21.62■■□□□ 1.05
CDX1-202ENST00000616154 INSRRP14616 1297 aa21.62■■□□□ 1.05
CDX1-202ENST00000616154 RPS6KB1P23443 525 aa21.62■■□□□ 1.05
CDX1-202ENST00000616154 EVCP57679 992 aa21.62■■□□□ 1.05
CDX1-202ENST00000616154 IGBP1P78318 339 aa21.62■■□□□ 1.05
CDX1-202ENST00000616154 MRPS6P82932 125 aaKnown RBP21.62■■□□□ 1.05
CDX1-202ENST00000616154 BLOC1S2Q6QNY1 142 aa21.62■■□□□ 1.05
CDX1-202ENST00000616154 ZNF713Q8N859 430 aaPredicted RBP21.62■■□□□ 1.05
CDX1-202ENST00000616154 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.62■■□□□ 1.05
CDX1-202ENST00000616154 CYP2W1Q8TAV3 490 aa21.62■■□□□ 1.05
CDX1-202ENST00000616154 SDF4Q9BRK5 362 aa21.62■■□□□ 1.05
CDX1-202ENST00000616154 AZI2Q9H6S1 392 aa21.62■■□□□ 1.05
CDX1-202ENST00000616154 RWDD3Q9Y3V2 267 aa21.62■■□□□ 1.05
CDX1-202ENST00000616154 ADGRA3Q8IWK6 1321 aa21.62■■□□□ 1.05
CDX1-202ENST00000616154 C5orf67F2Z3F1 127 aa21.61■■□□□ 1.05
CDX1-202ENST00000616154 RB1P06400 928 aa21.61■■□□□ 1.05
CDX1-202ENST00000616154 LINC00271P0C7V0 271 aa21.61■■□□□ 1.05
CDX1-202ENST00000616154 PSMA5P28066 241 aa21.61■■□□□ 1.05
CDX1-202ENST00000616154 ADCY7P51828 1080 aa21.61■■□□□ 1.05
CDX1-202ENST00000616154 ACTR2P61160 394 aa21.61■■□□□ 1.05
CDX1-202ENST00000616154 CEP55Q53EZ4 464 aa21.61■■□□□ 1.05
CDX1-202ENST00000616154 PLPPR4Q7Z2D5 763 aa21.61■■□□□ 1.05
CDX1-202ENST00000616154 NEK9Q8TD19 979 aa21.61■■□□□ 1.05
CDX1-202ENST00000616154 TNPO1Q92973 898 aaKnown RBP21.61■■□□□ 1.05
CDX1-202ENST00000616154 ANO3Q9BYT9 981 aa21.61■■□□□ 1.05
CDX1-202ENST00000616154 NSUN3Q9H649 340 aaKnown RBP21.61■■□□□ 1.05
CDX1-202ENST00000616154 TRPC6Q9Y210 931 aa21.61■■□□□ 1.05
CDX1-202ENST00000616154 SQORQ9Y6N5 450 aa21.61■■□□□ 1.05
CDX1-202ENST00000616154 GOLGA8AA7E2F4 631 aa21.6■■□□□ 1.05
CDX1-202ENST00000616154 GOLGA8BA8MQT2 603 aa21.6■■□□□ 1.05
CDX1-202ENST00000616154 STXBP3O00186 592 aa21.6■■□□□ 1.05
CDX1-202ENST00000616154 ARP10275 920 aa21.6■■□□□ 1.05
CDX1-202ENST00000616154 CPA1P15085 419 aa21.6■■□□□ 1.05
CDX1-202ENST00000616154 CTNNB1P35222 781 aa21.6■■□□□ 1.05
CDX1-202ENST00000616154 COL19A1Q14993 1142 aa21.6■■□□□ 1.05
CDX1-202ENST00000616154 PLCB4Q15147 1175 aa21.6■■□□□ 1.05
CDX1-202ENST00000616154 TCEAL5Q5H9L2 206 aa21.6■■□□□ 1.05
CDX1-202ENST00000616154 IER5Q5VY09 327 aa21.6■■□□□ 1.05
CDX1-202ENST00000616154 ZBTB10Q96DT7 871 aa21.6■■□□□ 1.05
CDX1-202ENST00000616154 PGBD1Q96JS3 809 aa21.6■■□□□ 1.05
CDX1-202ENST00000616154 FAM49AQ9H0Q0 323 aaPredicted RBP21.6■■□□□ 1.05
CDX1-202ENST00000616154 GLT8D2Q9H1C3 349 aa21.6■■□□□ 1.05
CDX1-202ENST00000616154 AGO3Q9H9G7 860 aaKnown RBP21.6■■□□□ 1.05
CDX1-202ENST00000616154 AGO4Q9HCK5 861 aaKnown RBP21.6■■□□□ 1.05
CDX1-202ENST00000616154 CD320Q9NPF0 282 aa21.6■■□□□ 1.05
CDX1-202ENST00000616154 V9GY48 417 aaPredicted RBP21.6■■□□□ 1.05
CDX1-202ENST00000616154 KIAA1671Q9BY89 1806 aa21.6■■□□□ 1.05
CDX1-202ENST00000616154 CDC27P30260 824 aa21.59■■□□□ 1.05
CDX1-202ENST00000616154 BMPR1AP36894 532 aa21.59■■□□□ 1.05
CDX1-202ENST00000616154 SREBF1P36956 1147 aa21.59■■□□□ 1.05
CDX1-202ENST00000616154 ITGB3BPQ13352 177 aaPredicted RBP21.59■■□□□ 1.05
CDX1-202ENST00000616154 AP3B2Q13367 1082 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms