RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 SORBS3O60504 671 aa7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 PDHBP11177 359 aa7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 BCRP11274 1271 aa7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 EZRP15311 586 aaKnown RBP7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 SEC24CP53992 1094 aa7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 GRB10Q13322 594 aa7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 BIRC3Q13489 604 aa7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 QRICH1Q2TAL8 776 aa7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 LRCH2Q5VUJ6 765 aa7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 PAPD7Q5XG87 772 aaKnown RBP7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 WDR59Q6PJI9 974 aa7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 KIAA0895Q8NCT3 520 aa7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 GLIS3Q8NEA6 775 aa7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 NUDT12Q9BQG2 462 aa7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 PSD3Q9NYI0 1048 aa7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 REXO2Q9Y3B8 237 aaKnown RBP7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 FLT1P17948 1338 aa7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 A0A087X0T9 212 aa7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 PALM3A6NDB9 673 aaPredicted RBP7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 TCP10L2B9ZVM9 353 aa7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 K7ENM7 598 aa7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 FAM228BP0C875 321 aa7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 GKAP1Q5VSY0 366 aaPredicted RBP7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 IRF2BP1Q8IU81 584 aa7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 PROM2Q8N271 834 aa7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 RNF10Q8N5U6 811 aaKnown RBP7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 TCHPQ9BT92 498 aa7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 VIPAS39Q9H9C1 493 aa7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 DNAJC17Q9NVM6 304 aaKnown RBP7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 MTMR4Q9NYA4 1195 aa7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 RGL1Q9NZL6 768 aa7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 DAAM1Q9Y4D1 1078 aa7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 BZW2Q9Y6E2 419 aaKnown RBP7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 EPHB6O15197 1021 aa7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 DAPK3O43293 454 aa7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 CTNND1O60716 968 aaKnown RBP7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 MYBL2P10244 700 aa7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 ARHGAP4P98171 946 aa7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 MKRN4PQ13434 485 aaPredicted RBP7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 SEPT2Q15019 361 aa7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 GRIK5Q16478 980 aa7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 ABCB5Q2M3G0 1257 aa7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 GLYCTKQ8IVS8 523 aa7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 WHAMMQ8TF30 809 aa7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 ZIM3Q96PE6 472 aa7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 PACSIN1Q9BY11 444 aa7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 SNX24Q9Y343 169 aa7.48□□□□□ -1.21
SYNPO2-206ENST00000610556 COL5A2P05997 1499 aaPredicted RBP7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 NR3C1P04150 777 aa7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 TRIM49P0CI25 452 aa7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 TRIM49CP0CI26 452 aa7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 FERP16591 822 aa7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 PSMC2P35998 433 aaKnown RBP7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 PBX1P40424 430 aa7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 TRAF1Q13077 416 aa7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 SNX1Q13596 522 aa7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 FBXW10Q5XX13 1052 aa7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 ZNF746Q6NUN9 644 aaPredicted RBP7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 CAPN12Q6ZSI9 719 aa7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 CCDC91Q7Z6B0 441 aa7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 MTMR8Q96EF0 704 aa7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 RGPD1P0DJD0 1748 aa7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 CLRN2A0PK11 232 aa7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 SF3B2Q13435 895 aaKnown RBP7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 E2F5Q15329 346 aa7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 SLC18A3Q16572 532 aa7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 NSMFQ6X4W1 530 aa7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 SH2D3AQ9BRG2 576 aa7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 STMN4Q9H169 189 aaPredicted RBP7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 ARHGEF10LQ9HCE6 1279 aa7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 SWAP70Q9UH65 585 aa7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 CD2APQ9Y5K6 639 aa7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 SART1O43290 800 aaKnown RBP7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 RAD51CO43502 376 aa7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 BBOX1O75936 387 aa7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 DLATP10515 647 aaKnown RBP7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 MYL7Q01449 175 aa7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 KNOP1Q1ED39 458 aaKnown RBP7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 GLE1Q53GS7 698 aaKnown RBP7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 GJB7Q6PEY0 223 aa7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 HOOK2Q96ED9 719 aa7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 PBKQ96KB5 322 aa7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 CCDC17Q96LX7 622 aa7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 CEP63Q96MT8 703 aa7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 FMO2Q99518 471 aa7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 JPH2Q9BR39 696 aaPredicted RBP7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 CCDC77Q9BR77 488 aa7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 DHX36Q9H2U1 1008 aaKnown RBP7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 UBE2TQ9NPD8 197 aaPredicted RBP7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 DNAJC12Q9UKB3 198 aa7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 DAGLAQ9Y4D2 1042 aa7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 LTN1O94822 1766 aa7.47□□□□□ -1.21
SYNPO2-206ENST00000610556 GOLGA8IPA6NC78 632 aa7.46□□□□□ -1.21
SYNPO2-206ENST00000610556 GOLGA8JA6NMD2 632 aa7.46□□□□□ -1.21
SYNPO2-206ENST00000610556 hCG_1984214I3L0E3 225 aa7.46□□□□□ -1.21
SYNPO2-206ENST00000610556 PPEF1O14829 653 aaPredicted RBP7.46□□□□□ -1.21
SYNPO2-206ENST00000610556 KLRC4O43908 158 aa7.46□□□□□ -1.21
SYNPO2-206ENST00000610556 CLTAP09496 248 aa7.46□□□□□ -1.21
SYNPO2-206ENST00000610556 MAGOHP61326 146 aaKnown RBP7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms