RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 EPHA7Q15375 998 aa30.95■■■□□ 2.55
CSPG5-205ENST00000610462 MCF2L2Q86YR7 1114 aa30.95■■■□□ 2.55
CSPG5-205ENST00000610462 CCDC155Q8N6L0 562 aa30.95■■■□□ 2.55
CSPG5-205ENST00000610462 ZFP91Q96JP5 570 aaPredicted RBP30.95■■■□□ 2.55
CSPG5-205ENST00000610462 CCDC42Q96M95 316 aa30.95■■■□□ 2.55
CSPG5-205ENST00000610462 PPP1R1BQ9UD71 204 aaPredicted RBP30.95■■■□□ 2.55
CSPG5-205ENST00000610462 CCDC122Q5T0U0 273 aa30.94■■■□□ 2.54
CSPG5-205ENST00000610462 B3GNT9Q6UX72 402 aa30.94■■■□□ 2.54
CSPG5-205ENST00000610462 SAMD7Q7Z3H4 446 aa30.94■■■□□ 2.54
CSPG5-205ENST00000610462 JAKMIP2Q96AA8 810 aa30.94■■■□□ 2.54
CSPG5-205ENST00000610462 PDXKO00764 312 aa30.94■■■□□ 2.54
CSPG5-205ENST00000610462 NR2F2P24468 414 aa30.94■■■□□ 2.54
CSPG5-205ENST00000610462 C1orf186Q6ZWK4 172 aa30.94■■■□□ 2.54
CSPG5-205ENST00000610462 RRAGAQ7L523 313 aa30.94■■■□□ 2.54
CSPG5-205ENST00000610462 OLFML3Q9NRN5 406 aa30.94■■■□□ 2.54
CSPG5-205ENST00000610462 COL20A1Q9P218 1284 aa30.94■■■□□ 2.54
CSPG5-205ENST00000610462 HACL1Q9UJ83 578 aa30.94■■■□□ 2.54
CSPG5-205ENST00000610462 BCS1LQ9Y276 419 aa30.94■■■□□ 2.54
CSPG5-205ENST00000610462 DOCK1Q14185 1865 aa30.94■■■□□ 2.54
CSPG5-205ENST00000610462 LRRC53A6NM62 1247 aa30.93■■■□□ 2.54
CSPG5-205ENST00000610462 NFIBO00712 420 aa30.93■■■□□ 2.54
CSPG5-205ENST00000610462 KRT86O43790 486 aa30.93■■■□□ 2.54
CSPG5-205ENST00000610462 CALUO43852 315 aaPredicted RBP30.93■■■□□ 2.54
CSPG5-205ENST00000610462 PRPF6O94906 941 aaKnown RBP30.93■■■□□ 2.54
CSPG5-205ENST00000610462 PDXDC1Q6P996 788 aa30.93■■■□□ 2.54
CSPG5-205ENST00000610462 RIT2Q99578 217 aa30.93■■■□□ 2.54
CSPG5-205ENST00000610462 SLC38A10Q9HBR0 1119 aa30.93■■■□□ 2.54
CSPG5-205ENST00000610462 ARHGAP20Q9P2F6 1191 aa30.93■■■□□ 2.54
CSPG5-205ENST00000610462 CNOT7Q9UIV1 285 aaKnown RBP30.93■■■□□ 2.54
CSPG5-205ENST00000610462 ASTN2O75129 1339 aaPredicted RBP30.93■■■□□ 2.54
CSPG5-205ENST00000610462 IPO5O00410 1097 aaKnown RBP30.93■■■□□ 2.54
CSPG5-205ENST00000610462 BCRP11274 1271 aa30.93■■■□□ 2.54
CSPG5-205ENST00000610462 TBC1D10BQ4KMP7 808 aaPredicted RBP30.93■■■□□ 2.54
CSPG5-205ENST00000610462 SRGAP1Q7Z6B7 1085 aa30.93■■■□□ 2.54
CSPG5-205ENST00000610462 CEP112Q8N8E3 955 aa30.93■■■□□ 2.54
CSPG5-205ENST00000610462 NACC1Q96RE7 527 aa30.93■■■□□ 2.54
CSPG5-205ENST00000610462 CACNA2D4Q7Z3S7 1137 aa30.92■■■□□ 2.54
CSPG5-205ENST00000610462 GOLGA1Q92805 767 aa30.92■■■□□ 2.54
CSPG5-205ENST00000610462 TYW1Q9NV66 732 aaKnown RBP30.92■■■□□ 2.54
CSPG5-205ENST00000610462 CEP72Q9P209 647 aa30.92■■■□□ 2.54
CSPG5-205ENST00000610462 PLEKP08567 350 aaPredicted RBP30.91■■■□□ 2.54
CSPG5-205ENST00000610462 NIPA1Q7RTP0 329 aa30.91■■■□□ 2.54
CSPG5-205ENST00000610462 FRMD5Q7Z6J6 570 aa30.91■■■□□ 2.54
CSPG5-205ENST00000610462 EHBP1Q8NDI1 1231 aa30.91■■■□□ 2.54
CSPG5-205ENST00000610462 GJA3Q9Y6H8 435 aa30.91■■■□□ 2.54
CSPG5-205ENST00000610462 FZD9O00144 591 aa30.91■■■□□ 2.54
CSPG5-205ENST00000610462 FAM13AO94988 1023 aa30.91■■■□□ 2.54
CSPG5-205ENST00000610462 GCNT3O95395 438 aa30.91■■■□□ 2.54
CSPG5-205ENST00000610462 ALAS1P13196 640 aa30.91■■■□□ 2.54
CSPG5-205ENST00000610462 ITGB5P18084 799 aa30.91■■■□□ 2.54
CSPG5-205ENST00000610462 DGKZQ13574 1117 aa30.91■■■□□ 2.54
CSPG5-205ENST00000610462 SPA17Q15506 151 aa30.91■■■□□ 2.54
CSPG5-205ENST00000610462 CPXCR1Q8N123 301 aa30.91■■■□□ 2.54
CSPG5-205ENST00000610462 GPR161Q8N6U8 529 aaKnown RBP30.91■■■□□ 2.54
CSPG5-205ENST00000610462 RAVER2Q9HCJ3 691 aaKnown RBP30.91■■■□□ 2.54
CSPG5-205ENST00000610462 TFR2Q9UP52 801 aa30.91■■■□□ 2.54
CSPG5-205ENST00000610462 VAV2P52735 878 aa30.9■■■□□ 2.54
CSPG5-205ENST00000610462 TEX35Q5T0J7 233 aa30.9■■■□□ 2.54
CSPG5-205ENST00000610462 SAMD3Q8N6K7 520 aa30.9■■■□□ 2.54
CSPG5-205ENST00000610462 RABGGTAQ92696 567 aa30.9■■■□□ 2.54
CSPG5-205ENST00000610462 NUCKS1Q9H1E3 243 aaKnown RBP30.9■■■□□ 2.54
CSPG5-205ENST00000610462 MAP3K20Q9NYL2 800 aaKnown RBP30.9■■■□□ 2.54
CSPG5-205ENST00000610462 DDX41Q9UJV9 622 aaKnown RBP30.9■■■□□ 2.54
CSPG5-205ENST00000610462 PPP1R9AQ9ULJ8 1098 aa30.9■■■□□ 2.54
CSPG5-205ENST00000610462 FRMPD4Q14CM0 1322 aa30.9■■■□□ 2.54
CSPG5-205ENST00000610462 PARP14Q460N5 1801 aa30.9■■■□□ 2.54
CSPG5-205ENST00000610462 RCCD1A6NED2 376 aa30.89■■■□□ 2.54
CSPG5-205ENST00000610462 NOL4O94818 638 aa30.89■■■□□ 2.54
CSPG5-205ENST00000610462 LCA5LO95447 670 aa30.89■■■□□ 2.54
CSPG5-205ENST00000610462 RASSF7Q02833 373 aa30.89■■■□□ 2.54
CSPG5-205ENST00000610462 NEK9Q8TD19 979 aa30.89■■■□□ 2.54
CSPG5-205ENST00000610462 LSM14BQ9BX40 385 aaKnown RBP30.89■■■□□ 2.54
CSPG5-205ENST00000610462 LACRTQ9GZZ8 138 aa30.89■■■□□ 2.54
CSPG5-205ENST00000610462 BCAS3Q9H6U6 928 aa30.89■■■□□ 2.54
CSPG5-205ENST00000610462 POLD4Q9HCU8 107 aa30.89■■■□□ 2.54
CSPG5-205ENST00000610462 ZNF263O14978 683 aa30.89■■■□□ 2.54
CSPG5-205ENST00000610462 ZBTB39O15060 712 aa30.89■■■□□ 2.54
CSPG5-205ENST00000610462 EIF3DO15371 548 aaKnown RBP eCLIP30.89■■■□□ 2.54
CSPG5-205ENST00000610462 FLOT1O75955 427 aa30.89■■■□□ 2.54
CSPG5-205ENST00000610462 VCAM1P19320 739 aa30.89■■■□□ 2.54
CSPG5-205ENST00000610462 EIF4A3P38919 411 aaKnown RBP30.89■■■□□ 2.54
CSPG5-205ENST00000610462 CYP27A1Q02318 531 aa30.89■■■□□ 2.54
CSPG5-205ENST00000610462 MTMR2Q13614 643 aa30.89■■■□□ 2.54
CSPG5-205ENST00000610462 NBPF12Q5TAG4 269 aaPredicted RBP30.89■■■□□ 2.54
CSPG5-205ENST00000610462 ARGLU1Q9NWB6 273 aaPredicted RBP30.89■■■□□ 2.54
CSPG5-205ENST00000610462 KCND2Q9NZV8 630 aa30.89■■■□□ 2.54
CSPG5-205ENST00000610462 WRAP73Q9P2S5 460 aaPredicted RBP30.89■■■□□ 2.54
CSPG5-205ENST00000610462 CD2APQ9Y5K6 639 aa30.89■■■□□ 2.54
CSPG5-205ENST00000610462 ASTN1O14525 1302 aa30.89■■■□□ 2.54
CSPG5-205ENST00000610462 CLCN6P51797 869 aa30.88■■■□□ 2.53
CSPG5-205ENST00000610462 USP14P54578 494 aa30.88■■■□□ 2.53
CSPG5-205ENST00000610462 CHMP4BP1P59074 171 aa30.88■■■□□ 2.53
CSPG5-205ENST00000610462 AMPD2Q01433 879 aa30.88■■■□□ 2.53
CSPG5-205ENST00000610462 WHAMMP3Q1A5X7 153 aa30.88■■■□□ 2.53
CSPG5-205ENST00000610462 CCDC125Q86Z20 511 aa30.88■■■□□ 2.53
CSPG5-205ENST00000610462 IL31RAQ8NI17 732 aa30.88■■■□□ 2.53
CSPG5-205ENST00000610462 TSGA10Q9BZW7 698 aa30.88■■■□□ 2.53
CSPG5-205ENST00000610462 SFI1A8K8P3 1242 aa30.88■■■□□ 2.53
CSPG5-205ENST00000610462 KIF11P52732 1056 aa30.88■■■□□ 2.53
CSPG5-205ENST00000610462 KCNH2Q12809 1159 aa30.88■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms