RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 C16orf59Q7L2K0 433 aa5.23□□□□□ -1.57
CKS1BP3-201ENST00000600888 CILP2Q8IUL8 1156 aa5.23□□□□□ -1.57
CKS1BP3-201ENST00000600888 ZC3H7AQ8IWR0 971 aaKnown RBP5.23□□□□□ -1.57
CKS1BP3-201ENST00000600888 TRIM48Q8IWZ4 208 aa5.23□□□□□ -1.57
CKS1BP3-201ENST00000600888 ARRDC4Q8NCT1 418 aa5.23□□□□□ -1.57
CKS1BP3-201ENST00000600888 PANK1Q8TE04 598 aa5.23□□□□□ -1.57
CKS1BP3-201ENST00000600888 EPB41L4AQ9HCS5 686 aaPredicted RBP5.23□□□□□ -1.57
CKS1BP3-201ENST00000600888 CATSPERZQ9NTU4 200 aa5.23□□□□□ -1.57
CKS1BP3-201ENST00000600888 ASH2LQ9UBL3 628 aa5.23□□□□□ -1.57
CKS1BP3-201ENST00000600888 DSEQ9UL01 958 aa5.23□□□□□ -1.57
CKS1BP3-201ENST00000600888 KCTD3Q9Y597 815 aa5.23□□□□□ -1.57
CKS1BP3-201ENST00000600888 ZNF644Q9H582 1327 aaPredicted RBP5.23□□□□□ -1.57
CKS1BP3-201ENST00000600888 STRCQ7RTU9 1775 aa5.22□□□□□ -1.57
CKS1BP3-201ENST00000600888 CROCC2H7BZ55 1655 aa5.22□□□□□ -1.57
CKS1BP3-201ENST00000600888 CLTCQ00610 1675 aaKnown RBP5.22□□□□□ -1.57
CKS1BP3-201ENST00000600888 TCRBV5S4A2TA0A5A2 114 aa5.22□□□□□ -1.57
CKS1BP3-201ENST00000600888 CDC45O75419 566 aa5.22□□□□□ -1.57
CKS1BP3-201ENST00000600888 CKMP06732 381 aa5.22□□□□□ -1.57
CKS1BP3-201ENST00000600888 KCNA6P17658 529 aa5.22□□□□□ -1.57
CKS1BP3-201ENST00000600888 PI3P19957 117 aa5.22□□□□□ -1.57
CKS1BP3-201ENST00000600888 ST5P78524 1137 aa5.22□□□□□ -1.57
CKS1BP3-201ENST00000600888 ZNF385BQ569K4 471 aa5.22□□□□□ -1.57
CKS1BP3-201ENST00000600888 FAM47CQ5HY64 1035 aa5.22□□□□□ -1.57
CKS1BP3-201ENST00000600888 CD300LDQ6UXZ3 194 aa5.22□□□□□ -1.57
CKS1BP3-201ENST00000600888 B3GNT8Q7Z7M8 397 aa5.22□□□□□ -1.57
CKS1BP3-201ENST00000600888 OSTM1Q86WC4 334 aa5.22□□□□□ -1.57
CKS1BP3-201ENST00000600888 FAM129CQ86XR2 697 aa5.22□□□□□ -1.57
CKS1BP3-201ENST00000600888 FAM126BQ8IXS8 530 aa5.22□□□□□ -1.57
CKS1BP3-201ENST00000600888 RBM12BQ8IXT5 1001 aaKnown RBP5.22□□□□□ -1.57
CKS1BP3-201ENST00000600888 FAM26EQ8N5C1 309 aa5.22□□□□□ -1.57
CKS1BP3-201ENST00000600888 UHMK1Q8TAS1 419 aaKnown RBP5.22□□□□□ -1.57
CKS1BP3-201ENST00000600888 CLEC4DQ8WXI8 215 aa5.22□□□□□ -1.57
CKS1BP3-201ENST00000600888 CBLCQ9ULV8 474 aa5.22□□□□□ -1.57
CKS1BP3-201ENST00000600888 FAN1Q9Y2M0 1017 aa5.22□□□□□ -1.57
CKS1BP3-201ENST00000600888 NUB1Q9Y5A7 615 aa5.22□□□□□ -1.57
CKS1BP3-201ENST00000600888 EIF2AK4Q9P2K8 1649 aaKnown RBP5.22□□□□□ -1.57
CKS1BP3-201ENST00000600888 NPATQ14207 1427 aa5.22□□□□□ -1.57
CKS1BP3-201ENST00000600888 MYOM3Q5VTT5 1437 aa5.22□□□□□ -1.57
CKS1BP3-201ENST00000600888 ZNF142P52746 1687 aaPredicted RBP5.21□□□□□ -1.57
CKS1BP3-201ENST00000600888 DHX29Q7Z478 1369 aaKnown RBP5.21□□□□□ -1.58
CKS1BP3-201ENST00000600888 CCDC66A2RUB6 948 aa5.21□□□□□ -1.58
CKS1BP3-201ENST00000600888 PDE6AP16499 860 aa5.21□□□□□ -1.58
CKS1BP3-201ENST00000600888 SDSP20132 328 aa5.21□□□□□ -1.58
CKS1BP3-201ENST00000600888 LIMS1P48059 325 aa5.21□□□□□ -1.58
CKS1BP3-201ENST00000600888 DNM2P50570 870 aa5.21□□□□□ -1.58
CKS1BP3-201ENST00000600888 PABPC4Q13310 644 aaKnown RBP eCLIP5.21□□□□□ -1.58
CKS1BP3-201ENST00000600888 TUSC3Q13454 348 aa5.21□□□□□ -1.58
CKS1BP3-201ENST00000600888 GPR19Q15760 415 aa5.21□□□□□ -1.58
CKS1BP3-201ENST00000600888 CRY1Q16526 586 aa5.21□□□□□ -1.58
CKS1BP3-201ENST00000600888 C21orf62-AS1Q17RA5 79 aa5.21□□□□□ -1.58
CKS1BP3-201ENST00000600888 TKFCQ3LXA3 575 aa5.21□□□□□ -1.58
CKS1BP3-201ENST00000600888 CNKSR3Q6P9H4 555 aa5.21□□□□□ -1.58
CKS1BP3-201ENST00000600888 ARHGAP36Q6ZRI8 547 aa5.21□□□□□ -1.58
CKS1BP3-201ENST00000600888 SMARCC2Q8TAQ2 1214 aa5.21□□□□□ -1.58
CKS1BP3-201ENST00000600888 KRTAP9-2Q9BYQ4 174 aa5.21□□□□□ -1.58
CKS1BP3-201ENST00000600888 PDGFDQ9GZP0 370 aaPredicted RBP5.21□□□□□ -1.58
CKS1BP3-201ENST00000600888 COQ6Q9Y2Z9 468 aa5.21□□□□□ -1.58
CKS1BP3-201ENST00000600888 TELO2Q9Y4R8 837 aa5.21□□□□□ -1.58
CKS1BP3-201ENST00000600888 CD2APQ9Y5K6 639 aa5.21□□□□□ -1.58
CKS1BP3-201ENST00000600888 PTPN23Q9H3S7 1636 aa5.21□□□□□ -1.58
CKS1BP3-201ENST00000600888 ZC3H13Q5T200 1668 aaKnown RBP5.21□□□□□ -1.58
CKS1BP3-201ENST00000600888 RNF17Q9BXT8 1623 aaKnown RBP5.2□□□□□ -1.58
CKS1BP3-201ENST00000600888 RFXAPO00287 272 aa5.2□□□□□ -1.58
CKS1BP3-201ENST00000600888 ENPP3O14638 875 aa5.2□□□□□ -1.58
CKS1BP3-201ENST00000600888 NUAK1O60285 661 aa5.2□□□□□ -1.58
CKS1BP3-201ENST00000600888 DNAJC8O75937 253 aaPredicted RBP5.2□□□□□ -1.58
CKS1BP3-201ENST00000600888 NPTXRO95502 500 aa5.2□□□□□ -1.58
CKS1BP3-201ENST00000600888 LRG1P02750 347 aa5.2□□□□□ -1.58
CKS1BP3-201ENST00000600888 LTFP02788 710 aa5.2□□□□□ -1.58
CKS1BP3-201ENST00000600888 AMY2AP04746 511 aa5.2□□□□□ -1.58
CKS1BP3-201ENST00000600888 C8BP07358 591 aa5.2□□□□□ -1.58
CKS1BP3-201ENST00000600888 YBX3P16989 372 aaKnown RBP eCLIP5.2□□□□□ -1.58
CKS1BP3-201ENST00000600888 AMY2BP19961 511 aa5.2□□□□□ -1.58
CKS1BP3-201ENST00000600888 CFPP27918 469 aa5.2□□□□□ -1.58
CKS1BP3-201ENST00000600888 STAT5AP42229 794 aa5.2□□□□□ -1.58
CKS1BP3-201ENST00000600888 EPHA5P54756 1037 aa5.2□□□□□ -1.58
CKS1BP3-201ENST00000600888 JAM2P57087 298 aa5.2□□□□□ -1.58
CKS1BP3-201ENST00000600888 LACTBP83111 547 aaPredicted RBP5.2□□□□□ -1.58
CKS1BP3-201ENST00000600888 GRIN1Q05586 938 aa5.2□□□□□ -1.58
CKS1BP3-201ENST00000600888 CR1LQ2VPA4 569 aa5.2□□□□□ -1.58
CKS1BP3-201ENST00000600888 CIAPIN1Q6FI81 312 aa5.2□□□□□ -1.58
CKS1BP3-201ENST00000600888 ABHD17CQ6PCB6 329 aa5.2□□□□□ -1.58
CKS1BP3-201ENST00000600888 ZC3H18Q86VM9 953 aaKnown RBP5.2□□□□□ -1.58
CKS1BP3-201ENST00000600888 NLGN1Q8N2Q7 840 aa5.2□□□□□ -1.58
CKS1BP3-201ENST00000600888 SH3RF2Q8TEC5 729 aa5.2□□□□□ -1.58
CKS1BP3-201ENST00000600888 DDX11Q96FC9 970 aa5.2□□□□□ -1.58
CKS1BP3-201ENST00000600888 TOE1Q96GM8 510 aaKnown RBP5.2□□□□□ -1.58
CKS1BP3-201ENST00000600888 PWWP2AQ96N64 755 aa5.2□□□□□ -1.58
CKS1BP3-201ENST00000600888 TOX2Q96NM4 488 aa5.2□□□□□ -1.58
CKS1BP3-201ENST00000600888 YIPF4Q9BSR8 244 aa5.2□□□□□ -1.58
CKS1BP3-201ENST00000600888 CELF4Q9BZC1 486 aaKnown RBP5.2□□□□□ -1.58
CKS1BP3-201ENST00000600888 CD244Q9BZW8 370 aa5.2□□□□□ -1.58
CKS1BP3-201ENST00000600888 IRF2BPLQ9H1B7 796 aa5.2□□□□□ -1.58
CKS1BP3-201ENST00000600888 NGRNQ9NPE2 291 aaKnown RBP5.2□□□□□ -1.58
CKS1BP3-201ENST00000600888 DTLQ9NZJ0 730 aa5.2□□□□□ -1.58
CKS1BP3-201ENST00000600888 TMA7Q9Y2S6 64 aaKnown RBP5.2□□□□□ -1.58
CKS1BP3-201ENST00000600888 UHRF1BP1Q6BDS2 1440 aa5.2□□□□□ -1.58
CKS1BP3-201ENST00000600888 TCOF1Q13428 1488 aaKnown RBP5.2□□□□□ -1.58
CKS1BP3-201ENST00000600888 SHANK2Q9UPX8 1470 aa5.2□□□□□ -1.58
CKS1BP3-201ENST00000600888 DNMT1P26358 1616 aaKnown RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms