RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 PCDHA10Q9Y5I2 948 aa11.71□□□□□ -0.53
CCDC47-203ENST00000580986 WDR81Q562E7 1941 aa11.7□□□□□ -0.54
CCDC47-203ENST00000580986 NOP56O00567 594 aaKnown RBP11.7□□□□□ -0.54
CCDC47-203ENST00000580986 CTAGE5O15320 804 aa11.7□□□□□ -0.54
CCDC47-203ENST00000580986 ZEB2O60315 1214 aa11.7□□□□□ -0.54
CCDC47-203ENST00000580986 DKC1O60832 514 aaKnown RBP eCLIP11.7□□□□□ -0.54
CCDC47-203ENST00000580986 CUTAO60888 179 aa11.7□□□□□ -0.54
CCDC47-203ENST00000580986 LGR5O75473 907 aa11.7□□□□□ -0.54
CCDC47-203ENST00000580986 CCNE2O96020 404 aa11.7□□□□□ -0.54
CCDC47-203ENST00000580986 MMP3P08254 477 aa11.7□□□□□ -0.54
CCDC47-203ENST00000580986 EPHA7Q15375 998 aa11.7□□□□□ -0.54
CCDC47-203ENST00000580986 MTFR1Q15390 333 aa11.7□□□□□ -0.54
CCDC47-203ENST00000580986 FSCN1Q16658 493 aaKnown RBP11.7□□□□□ -0.54
CCDC47-203ENST00000580986 DGKDQ16760 1214 aa11.7□□□□□ -0.54
CCDC47-203ENST00000580986 HAUS3Q68CZ6 603 aa11.7□□□□□ -0.54
CCDC47-203ENST00000580986 CCSAPQ6IQ19 270 aaPredicted RBP11.7□□□□□ -0.54
CCDC47-203ENST00000580986 MIS18BP1Q6P0N0 1132 aa11.7□□□□□ -0.54
CCDC47-203ENST00000580986 ABHD15Q6UXT9 468 aa11.7□□□□□ -0.54
CCDC47-203ENST00000580986 RNF180Q86T96 592 aa11.7□□□□□ -0.54
CCDC47-203ENST00000580986 ANKLE1Q8NAG6 615 aa11.7□□□□□ -0.54
CCDC47-203ENST00000580986 PCSK9Q8NBP7 692 aaKnown RBP11.7□□□□□ -0.54
CCDC47-203ENST00000580986 ARRDC4Q8NCT1 418 aa11.7□□□□□ -0.54
CCDC47-203ENST00000580986 SPATA32Q96LK8 384 aa11.7□□□□□ -0.54
CCDC47-203ENST00000580986 RNF208Q9H0X6 261 aa11.7□□□□□ -0.54
CCDC47-203ENST00000580986 UNC45AQ9H3U1 944 aa11.7□□□□□ -0.54
CCDC47-203ENST00000580986 DISC1Q9NRI5 854 aa11.7□□□□□ -0.54
CCDC47-203ENST00000580986 TFIP11Q9UBB9 837 aaKnown RBP11.7□□□□□ -0.54
CCDC47-203ENST00000580986 LOXHD1Q8IVV2 1947 aa11.7□□□□□ -0.54
CCDC47-203ENST00000580986 IGSF9BQ9UPX0 1349 aa11.69□□□□□ -0.54
CCDC47-203ENST00000580986 MOXD2PA6NHM9 499 aa11.69□□□□□ -0.54
CCDC47-203ENST00000580986 DNM1LO00429 736 aa11.69□□□□□ -0.54
CCDC47-203ENST00000580986 DYNC1LI2O43237 492 aaPredicted RBP11.69□□□□□ -0.54
CCDC47-203ENST00000580986 CABYRO75952 493 aa11.69□□□□□ -0.54
CCDC47-203ENST00000580986 LYPLA2O95372 231 aa11.69□□□□□ -0.54
CCDC47-203ENST00000580986 F2P00734 622 aa11.69□□□□□ -0.54
CCDC47-203ENST00000580986 P4HBP07237 508 aaKnown RBP11.69□□□□□ -0.54
CCDC47-203ENST00000580986 PSAPP07602 524 aa11.69□□□□□ -0.54
CCDC47-203ENST00000580986 SUPT20HL2P0C7V6 817 aa11.69□□□□□ -0.54
CCDC47-203ENST00000580986 RPA1P27694 616 aa11.69□□□□□ -0.54
CCDC47-203ENST00000580986 TECP42680 631 aa11.69□□□□□ -0.54
CCDC47-203ENST00000580986 GJA8P48165 433 aa11.69□□□□□ -0.54
CCDC47-203ENST00000580986 IL17AQ16552 155 aa11.69□□□□□ -0.54
CCDC47-203ENST00000580986 HYIQ5T013 277 aa11.69□□□□□ -0.54
CCDC47-203ENST00000580986 TMEM63BQ5T3F8 832 aa11.69□□□□□ -0.54
CCDC47-203ENST00000580986 GJC2Q5T442 439 aaPredicted RBP11.69□□□□□ -0.54
CCDC47-203ENST00000580986 ADALQ6DHV7 355 aa11.69□□□□□ -0.54
CCDC47-203ENST00000580986 PLPPR4Q7Z2D5 763 aa11.69□□□□□ -0.54
CCDC47-203ENST00000580986 MIER3Q7Z3K6 550 aa11.69□□□□□ -0.54
CCDC47-203ENST00000580986 ERMNQ8TAM6 284 aa11.69□□□□□ -0.54
CCDC47-203ENST00000580986 AFG1LQ8WV93 481 aa11.69□□□□□ -0.54
CCDC47-203ENST00000580986 COPS5Q92905 334 aa11.69□□□□□ -0.54
CCDC47-203ENST00000580986 GBP4Q96PP9 640 aa11.69□□□□□ -0.54
CCDC47-203ENST00000580986 HSD17B14Q9BPX1 270 aa11.69□□□□□ -0.54
CCDC47-203ENST00000580986 POLR3CQ9BUI4 534 aaPredicted RBP11.69□□□□□ -0.54
CCDC47-203ENST00000580986 SEZ6LQ9BYH1 1024 aa11.69□□□□□ -0.54
CCDC47-203ENST00000580986 CCSER1Q9C0I3 900 aa11.69□□□□□ -0.54
CCDC47-203ENST00000580986 TUFT1Q9NNX1 390 aa11.69□□□□□ -0.54
CCDC47-203ENST00000580986 KDM3AQ9Y4C1 1321 aa11.68□□□□□ -0.54
CCDC47-203ENST00000580986 A0A1W2PQ27 194 aa11.68□□□□□ -0.54
CCDC47-203ENST00000580986 A0A1W2PQ64 194 aa11.68□□□□□ -0.54
CCDC47-203ENST00000580986 A0A1W2PQD8 194 aa11.68□□□□□ -0.54
CCDC47-203ENST00000580986 GSTTP1A0A1W2PQM5 241 aa11.68□□□□□ -0.54
CCDC47-203ENST00000580986 VWA3AA6NCI4 1184 aa11.68□□□□□ -0.54
CCDC47-203ENST00000580986 SGPL1O95470 568 aa11.68□□□□□ -0.54
CCDC47-203ENST00000580986 C6orf222P0C671 652 aaPredicted RBP11.68□□□□□ -0.54
CCDC47-203ENST00000580986 NCLP19338 710 aaKnown RBP11.68□□□□□ -0.54
CCDC47-203ENST00000580986 MARCKSP29966 332 aaPredicted RBP11.68□□□□□ -0.54
CCDC47-203ENST00000580986 TCF7P36402 384 aaPredicted RBP11.68□□□□□ -0.54
CCDC47-203ENST00000580986 CEBPZQ03701 1054 aaKnown RBP11.68□□□□□ -0.54
CCDC47-203ENST00000580986 LRRC41Q15345 812 aa11.68□□□□□ -0.54
CCDC47-203ENST00000580986 FOXD4L6Q3SYB3 417 aaPredicted RBP11.68□□□□□ -0.54
CCDC47-203ENST00000580986 AXDND1Q5T1B0 1012 aaPredicted RBP11.68□□□□□ -0.54
CCDC47-203ENST00000580986 FOXD4L3Q6VB84 417 aaPredicted RBP11.68□□□□□ -0.54
CCDC47-203ENST00000580986 U2AF1L4Q8WU68 220 aaKnown RBP11.68□□□□□ -0.54
CCDC47-203ENST00000580986 ATP6V0A1Q93050 837 aa11.68□□□□□ -0.54
CCDC47-203ENST00000580986 DEFB118Q96PH6 123 aa11.68□□□□□ -0.54
CCDC47-203ENST00000580986 KATNAL1Q9BW62 490 aa11.68□□□□□ -0.54
CCDC47-203ENST00000580986 NT5C3AQ9H0P0 336 aa11.68□□□□□ -0.54
CCDC47-203ENST00000580986 SMARCAD1Q9H4L7 1026 aa11.68□□□□□ -0.54
CCDC47-203ENST00000580986 BCAS3Q9H6U6 928 aa11.68□□□□□ -0.54
CCDC47-203ENST00000580986 PKD2L1Q9P0L9 805 aa11.68□□□□□ -0.54
CCDC47-203ENST00000580986 LRWD1Q9UFC0 647 aa11.68□□□□□ -0.54
CCDC47-203ENST00000580986 ZNF215Q9UL58 517 aaPredicted RBP11.68□□□□□ -0.54
CCDC47-203ENST00000580986 MAFBQ9Y5Q3 323 aaPredicted RBP11.68□□□□□ -0.54
CCDC47-203ENST00000580986 SCN10AQ9Y5Y9 1956 aa11.68□□□□□ -0.54
CCDC47-203ENST00000580986 MYH9P35579 1960 aaKnown RBP11.67□□□□□ -0.54
CCDC47-203ENST00000580986 FAM237AA0A1B0GTK4 181 aa11.67□□□□□ -0.54
CCDC47-203ENST00000580986 DDX39AO00148 427 aaKnown RBP11.67□□□□□ -0.54
CCDC47-203ENST00000580986 EML1O00423 815 aa11.67□□□□□ -0.54
CCDC47-203ENST00000580986 PGK1P00558 417 aa11.67□□□□□ -0.54
CCDC47-203ENST00000580986 LGALS2P05162 132 aa11.67□□□□□ -0.54
CCDC47-203ENST00000580986 XRCC6P12956 609 aaKnown RBP eCLIP11.67□□□□□ -0.54
CCDC47-203ENST00000580986 TXLNAP40222 546 aa11.67□□□□□ -0.54
CCDC47-203ENST00000580986 QARSP47897 775 aaKnown RBP11.67□□□□□ -0.54
CCDC47-203ENST00000580986 ME1P48163 572 aa11.67□□□□□ -0.54
CCDC47-203ENST00000580986 PSMC5P62195 406 aa11.67□□□□□ -0.54
CCDC47-203ENST00000580986 PURAQ00577 322 aaKnown RBP11.67□□□□□ -0.54
CCDC47-203ENST00000580986 GNASQ5JWF2 1037 aa11.67□□□□□ -0.54
CCDC47-203ENST00000580986 FAM160B1Q5W0V3 765 aa11.67□□□□□ -0.54
CCDC47-203ENST00000580986 KRT79Q5XKE5 535 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms