RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 MIS18BP1Q6P0N0 1132 aa18.86■□□□□ 0.61
SREBF1-219ENST00000580540 CNKSR3Q6P9H4 555 aa18.86■□□□□ 0.61
SREBF1-219ENST00000580540 TRAF7Q6Q0C0 670 aa18.86■□□□□ 0.61
SREBF1-219ENST00000580540 GTF3C6Q969F1 213 aa18.86■□□□□ 0.61
SREBF1-219ENST00000580540 CDX2Q99626 313 aaPredicted RBP18.86■□□□□ 0.61
SREBF1-219ENST00000580540 NKX2-4Q9H2Z4 354 aa18.86■□□□□ 0.61
SREBF1-219ENST00000580540 ZNF576Q9H609 170 aa18.86■□□□□ 0.61
SREBF1-219ENST00000580540 GJB4Q9NTQ9 266 aa18.86■□□□□ 0.61
SREBF1-219ENST00000580540 TBC1D22BQ9NU19 505 aa18.86■□□□□ 0.61
SREBF1-219ENST00000580540 CXCL10P02778 98 aa18.85■□□□□ 0.61
SREBF1-219ENST00000580540 MYOGP15173 224 aa18.85■□□□□ 0.61
SREBF1-219ENST00000580540 FOSBP53539 338 aa18.85■□□□□ 0.61
SREBF1-219ENST00000580540 ADAM17P78536 824 aa18.85■□□□□ 0.61
SREBF1-219ENST00000580540 MBTPS1Q14703 1052 aa18.85■□□□□ 0.61
SREBF1-219ENST00000580540 PLCB4Q15147 1175 aa18.85■□□□□ 0.61
SREBF1-219ENST00000580540 SWSAP1Q6NVH7 229 aa18.85■□□□□ 0.61
SREBF1-219ENST00000580540 ABHD15Q6UXT9 468 aa18.85■□□□□ 0.61
SREBF1-219ENST00000580540 RUFY4Q6ZNE9 571 aa18.85■□□□□ 0.61
SREBF1-219ENST00000580540 PLPPR4Q7Z2D5 763 aa18.85■□□□□ 0.61
SREBF1-219ENST00000580540 DAGLBQ8NCG7 672 aa18.85■□□□□ 0.61
SREBF1-219ENST00000580540 WASF1Q92558 559 aa18.85■□□□□ 0.61
SREBF1-219ENST00000580540 TNPO1Q92973 898 aaKnown RBP18.85■□□□□ 0.61
SREBF1-219ENST00000580540 TUBE1Q9UJT0 475 aa18.85■□□□□ 0.61
SREBF1-219ENST00000580540 STXBP5LQ9Y2K9 1186 aa18.85■□□□□ 0.61
SREBF1-219ENST00000580540 SAMM50Q9Y512 469 aa18.85■□□□□ 0.61
SREBF1-219ENST00000580540 TMEM265A0A087WTH1 108 aa18.84■□□□□ 0.61
SREBF1-219ENST00000580540 CCDC194A0A1B0GVG4 234 aa18.84■□□□□ 0.61
SREBF1-219ENST00000580540 POTEB3A0JP26 581 aa18.84■□□□□ 0.61
SREBF1-219ENST00000580540 RRN3P2A6NIE6 340 aa18.84■□□□□ 0.61
SREBF1-219ENST00000580540 EDIL3O43854 480 aa18.84■□□□□ 0.61
SREBF1-219ENST00000580540 BAIAP3O94812 1187 aa18.84■□□□□ 0.61
SREBF1-219ENST00000580540 ATG7O95352 703 aa18.84■□□□□ 0.61
SREBF1-219ENST00000580540 NONOQ15233 471 aaKnown RBP eCLIP18.84■□□□□ 0.61
SREBF1-219ENST00000580540 NPY5RQ15761 445 aa18.84■□□□□ 0.61
SREBF1-219ENST00000580540 INF2Q27J81 1249 aa18.84■□□□□ 0.61
SREBF1-219ENST00000580540 PDXDC2PQ6P474 469 aa18.84■□□□□ 0.61
SREBF1-219ENST00000580540 POTEBQ6S5H4 581 aa18.84■□□□□ 0.61
SREBF1-219ENST00000580540 TRMT1LQ7Z2T5 733 aaKnown RBP18.84■□□□□ 0.61
SREBF1-219ENST00000580540 KRT25Q7Z3Z0 450 aa18.84■□□□□ 0.61
SREBF1-219ENST00000580540 CKAP2LQ8IYA6 745 aa18.84■□□□□ 0.61
SREBF1-219ENST00000580540 FAM177A1Q8N128 213 aaPredicted RBP18.84■□□□□ 0.61
SREBF1-219ENST00000580540 TRAPPC12Q8WVT3 735 aa18.84■□□□□ 0.61
SREBF1-219ENST00000580540 MYLIPQ8WY64 445 aa18.84■□□□□ 0.61
SREBF1-219ENST00000580540 ZBTB10Q96DT7 871 aa18.84■□□□□ 0.61
SREBF1-219ENST00000580540 SLC9A7Q96T83 725 aa18.84■□□□□ 0.61
SREBF1-219ENST00000580540 PHF20Q9BVI0 1012 aa18.84■□□□□ 0.61
SREBF1-219ENST00000580540 FAM49AQ9H0Q0 323 aaPredicted RBP18.84■□□□□ 0.61
SREBF1-219ENST00000580540 SLC28A3Q9HAS3 691 aa18.84■□□□□ 0.61
SREBF1-219ENST00000580540 ZNF302Q9NR11 478 aa18.84■□□□□ 0.61
SREBF1-219ENST00000580540 YBX2Q9Y2T7 364 aaKnown RBP18.84■□□□□ 0.61
SREBF1-219ENST00000580540 M0R2N6 131 aa18.83■□□□□ 0.6
SREBF1-219ENST00000580540 MSH4O15457 936 aa18.83■□□□□ 0.6
SREBF1-219ENST00000580540 CAND2O75155 1236 aa18.83■□□□□ 0.6
SREBF1-219ENST00000580540 TDP2O95551 362 aa18.83■□□□□ 0.6
SREBF1-219ENST00000580540 KRT76Q01546 638 aa18.83■□□□□ 0.6
SREBF1-219ENST00000580540 IKBKEQ14164 716 aa18.83■□□□□ 0.6
SREBF1-219ENST00000580540 GRIN2CQ14957 1233 aa18.83■□□□□ 0.6
SREBF1-219ENST00000580540 TCTN1Q2MV58 587 aa18.83■□□□□ 0.6
SREBF1-219ENST00000580540 ZNF746Q6NUN9 644 aaPredicted RBP18.83■□□□□ 0.6
SREBF1-219ENST00000580540 TAF2Q6P1X5 1199 aa18.83■□□□□ 0.6
SREBF1-219ENST00000580540 RSPH3Q86UC2 560 aa18.83■□□□□ 0.6
SREBF1-219ENST00000580540 CCDC60Q8IWA6 550 aaPredicted RBP18.83■□□□□ 0.6
SREBF1-219ENST00000580540 DBF4BQ8NFT6 615 aa18.83■□□□□ 0.6
SREBF1-219ENST00000580540 DNAJB3Q8WWF6 145 aa18.83■□□□□ 0.6
SREBF1-219ENST00000580540 GJA10Q969M2 543 aa18.83■□□□□ 0.6
SREBF1-219ENST00000580540 LENG9Q96B70 501 aa18.83■□□□□ 0.6
SREBF1-219ENST00000580540 ABHD14A-ACY1A0A1B0GW23 586 aa18.82■□□□□ 0.6
SREBF1-219ENST00000580540 KIF28PB7ZC32 967 aa18.82■□□□□ 0.6
SREBF1-219ENST00000580540 CHMP2AO43633 222 aa18.82■□□□□ 0.6
SREBF1-219ENST00000580540 JAK2O60674 1132 aa18.82■□□□□ 0.6
SREBF1-219ENST00000580540 GAS7O60861 476 aa18.82■□□□□ 0.6
SREBF1-219ENST00000580540 PSAPP07602 524 aa18.82■□□□□ 0.6
SREBF1-219ENST00000580540 FDPSP14324 419 aaKnown RBP18.82■□□□□ 0.6
SREBF1-219ENST00000580540 WDR5P61964 334 aaKnown RBP18.82■□□□□ 0.6
SREBF1-219ENST00000580540 LETM2Q2VYF4 491 aa18.82■□□□□ 0.6
SREBF1-219ENST00000580540 MARCH8Q5T0T0 291 aa18.82■□□□□ 0.6
SREBF1-219ENST00000580540 TMCO2Q7Z6W1 182 aaPredicted RBP18.82■□□□□ 0.6
SREBF1-219ENST00000580540 NSUN7Q8NE18 718 aaKnown RBP18.82■□□□□ 0.6
SREBF1-219ENST00000580540 PHOSPHO2Q8TCD6 241 aa18.82■□□□□ 0.6
SREBF1-219ENST00000580540 OXER1Q8TDS5 423 aa18.82■□□□□ 0.6
SREBF1-219ENST00000580540 ZBED2Q9BTP6 218 aa18.82■□□□□ 0.6
SREBF1-219ENST00000580540 LIMCH1Q9UPQ0 1083 aa18.82■□□□□ 0.6
SREBF1-219ENST00000580540 PCDHA11Q9Y5I1 949 aa18.82■□□□□ 0.6
SREBF1-219ENST00000580540 PCDHA10Q9Y5I2 948 aa18.82■□□□□ 0.6
SREBF1-219ENST00000580540 IGKV6D-21A0A0A0MT36 114 aa18.81■□□□□ 0.6
SREBF1-219ENST00000580540 SLC26A2P50443 739 aa18.81■□□□□ 0.6
SREBF1-219ENST00000580540 LRCH2Q5VUJ6 765 aa18.81■□□□□ 0.6
SREBF1-219ENST00000580540 PPP2R2DQ66LE6 453 aa18.81■□□□□ 0.6
SREBF1-219ENST00000580540 PIK3AP1Q6ZUJ8 805 aa18.81■□□□□ 0.6
SREBF1-219ENST00000580540 HERC6Q8IVU3 1022 aa18.81■□□□□ 0.6
SREBF1-219ENST00000580540 SMAP1Q8IYB5 467 aaPredicted RBP18.81■□□□□ 0.6
SREBF1-219ENST00000580540 SEPT8Q92599 483 aa18.81■□□□□ 0.6
SREBF1-219ENST00000580540 TEKT3Q9BXF9 490 aa18.81■□□□□ 0.6
SREBF1-219ENST00000580540 OSBPL7Q9BZF2 842 aa18.81■□□□□ 0.6
SREBF1-219ENST00000580540 GABBR1Q9UBS5 961 aa18.81■□□□□ 0.6
SREBF1-219ENST00000580540 GBF1Q92538 1859 aa18.8■□□□□ 0.6
SREBF1-219ENST00000580540 MBLAC1A4D2B0 266 aaPredicted RBP18.8■□□□□ 0.6
SREBF1-219ENST00000580540 WDR64B1ANS9 1081 aa18.8■□□□□ 0.6
SREBF1-219ENST00000580540 HBP1O60381 514 aa18.8■□□□□ 0.6
SREBF1-219ENST00000580540 CHRNA1P02708 482 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms