RNA–Protein interactions for RNA: ENST00000574997.1

TRIM25-209, Transcript of tripartite motif containing 25, humanhuman

TSL 3

Gene TRIM25, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-209ENST00000574997 RNF20Q5VTR2 975 aa7.42□□□□□ -1.22
TRIM25-209ENST00000574997 PDE12Q6L8Q7 609 aaKnown RBP7.42□□□□□ -1.22
TRIM25-209ENST00000574997 POTEBQ6S5H4 581 aa7.42□□□□□ -1.22
TRIM25-209ENST00000574997 NFXL1Q6ZNB6 911 aa7.42□□□□□ -1.22
TRIM25-209ENST00000574997 ADHFE1Q8IWW8 467 aa7.42□□□□□ -1.22
TRIM25-209ENST00000574997 MB21D2Q8IYB1 491 aaPredicted RBP7.42□□□□□ -1.22
TRIM25-209ENST00000574997 CMTR2Q8IYT2 770 aaKnown RBP7.42□□□□□ -1.22
TRIM25-209ENST00000574997 ZNF713Q8N859 430 aaPredicted RBP7.42□□□□□ -1.22
TRIM25-209ENST00000574997 FANCBQ8NB91 859 aa7.42□□□□□ -1.22
TRIM25-209ENST00000574997 EXOC6Q8TAG9 804 aa7.42□□□□□ -1.22
TRIM25-209ENST00000574997 GPKOWQ92917 476 aaPredicted RBP eCLIP7.42□□□□□ -1.22
TRIM25-209ENST00000574997 ZNF689Q96CS4 500 aaPredicted RBP7.42□□□□□ -1.22
TRIM25-209ENST00000574997 PRRX2Q99811 253 aa7.42□□□□□ -1.22
TRIM25-209ENST00000574997 LY9Q9HBG7 655 aa7.42□□□□□ -1.22
TRIM25-209ENST00000574997 RBM28Q9NW13 759 aaKnown RBP7.42□□□□□ -1.22
TRIM25-209ENST00000574997 TUBE1Q9UJT0 475 aa7.42□□□□□ -1.22
TRIM25-209ENST00000574997 PCDHA2Q9Y5H9 948 aa7.42□□□□□ -1.22
TRIM25-209ENST00000574997 UBIAD1Q9Y5Z9 338 aa7.42□□□□□ -1.22
TRIM25-209ENST00000574997 SLC12A7Q9Y666 1083 aa7.42□□□□□ -1.22
TRIM25-209ENST00000574997 NFASCO94856 1347 aa7.42□□□□□ -1.22
TRIM25-209ENST00000574997 BAZ2BQ9UIF8 2168 aaKnown RBP7.42□□□□□ -1.22
TRIM25-209ENST00000574997 GSTTP1A0A1W2PQM5 241 aa7.41□□□□□ -1.22
TRIM25-209ENST00000574997 PRC1O43663 620 aa7.41□□□□□ -1.22
TRIM25-209ENST00000574997 MMP1P03956 469 aa7.41□□□□□ -1.22
TRIM25-209ENST00000574997 CTSHP09668 335 aa7.41□□□□□ -1.22
TRIM25-209ENST00000574997 GSPT1P15170 499 aaKnown RBP7.41□□□□□ -1.22
TRIM25-209ENST00000574997 ITGB5P18084 799 aa7.41□□□□□ -1.22
TRIM25-209ENST00000574997 CTNNB1P35222 781 aa7.41□□□□□ -1.22
TRIM25-209ENST00000574997 UBE3AQ05086 875 aa7.41□□□□□ -1.22
TRIM25-209ENST00000574997 MGAT3Q09327 533 aa7.41□□□□□ -1.22
TRIM25-209ENST00000574997 BTG3Q14201 252 aaPredicted RBP7.41□□□□□ -1.22
TRIM25-209ENST00000574997 SMAD2Q15796 467 aaKnown RBP7.41□□□□□ -1.22
TRIM25-209ENST00000574997 GRIK4Q16099 956 aa7.41□□□□□ -1.22
TRIM25-209ENST00000574997 SLC35G1Q2M3R5 365 aa7.41□□□□□ -1.22
TRIM25-209ENST00000574997 TCEAL5Q5H9L2 206 aa7.41□□□□□ -1.22
TRIM25-209ENST00000574997 FBXO47Q5MNV8 452 aa7.41□□□□□ -1.22
TRIM25-209ENST00000574997 USP17L6PQ6QN14 398 aa7.41□□□□□ -1.22
TRIM25-209ENST00000574997 NIPA1Q7RTP0 329 aa7.41□□□□□ -1.22
TRIM25-209ENST00000574997 SPRED2Q7Z698 418 aa7.41□□□□□ -1.22
TRIM25-209ENST00000574997 SGMS1Q86VZ5 419 aa7.41□□□□□ -1.22
TRIM25-209ENST00000574997 NPAS4Q8IUM7 802 aa7.41□□□□□ -1.22
TRIM25-209ENST00000574997 MFSD14AQ96MC6 490 aa7.41□□□□□ -1.22
TRIM25-209ENST00000574997 SDF4Q9BRK5 362 aa7.41□□□□□ -1.22
TRIM25-209ENST00000574997 JPH1Q9HDC5 661 aaPredicted RBP7.41□□□□□ -1.22
TRIM25-209ENST00000574997 AAASQ9NRG9 546 aa7.41□□□□□ -1.22
TRIM25-209ENST00000574997 SLC9A2Q9UBY0 812 aa7.41□□□□□ -1.22
TRIM25-209ENST00000574997 PCDHA6Q9UN73 950 aa7.41□□□□□ -1.22
TRIM25-209ENST00000574997 PCDHA8Q9Y5H6 950 aa7.41□□□□□ -1.22
TRIM25-209ENST00000574997 ADGRA3Q8IWK6 1321 aa7.41□□□□□ -1.22
TRIM25-209ENST00000574997 KDM3AQ9Y4C1 1321 aa7.41□□□□□ -1.22
TRIM25-209ENST00000574997 TTC3P53804 2025 aa7.4□□□□□ -1.22
TRIM25-209ENST00000574997 SMIM35A0A1B0GVV1 85 aa7.4□□□□□ -1.22
TRIM25-209ENST00000574997 CARNS1A5YM72 827 aa7.4□□□□□ -1.22
TRIM25-209ENST00000574997 SORBS3O60504 671 aa7.4□□□□□ -1.22
TRIM25-209ENST00000574997 ATP9AO75110 1047 aa7.4□□□□□ -1.22
TRIM25-209ENST00000574997 ATG7O95352 703 aa7.4□□□□□ -1.22
TRIM25-209ENST00000574997 GHRP10912 638 aa7.4□□□□□ -1.22
TRIM25-209ENST00000574997 IL9P15248 144 aa7.4□□□□□ -1.22
TRIM25-209ENST00000574997 STAT5BP51692 787 aa7.4□□□□□ -1.22
TRIM25-209ENST00000574997 RCAN1P53805 252 aa7.4□□□□□ -1.22
TRIM25-209ENST00000574997 ANTXR2P58335 489 aa7.4□□□□□ -1.22
TRIM25-209ENST00000574997 MRPS6P82932 125 aaKnown RBP7.4□□□□□ -1.22
TRIM25-209ENST00000574997 ZP2Q05996 745 aa7.4□□□□□ -1.22
TRIM25-209ENST00000574997 AP3B2Q13367 1082 aa7.4□□□□□ -1.22
TRIM25-209ENST00000574997 ADAM15Q13444 863 aa7.4□□□□□ -1.22
TRIM25-209ENST00000574997 SMAD4Q13485 552 aaKnown RBP7.4□□□□□ -1.22
TRIM25-209ENST00000574997 LPIN1Q14693 890 aa7.4□□□□□ -1.22
TRIM25-209ENST00000574997 MARCH8Q5T0T0 291 aa7.4□□□□□ -1.22
TRIM25-209ENST00000574997 PPP1R18Q6NYC8 613 aa7.4□□□□□ -1.22
TRIM25-209ENST00000574997 ALYREFQ86V81 257 aaKnown RBP7.4□□□□□ -1.22
TRIM25-209ENST00000574997 CRIPAKQ8N1N5 446 aa7.4□□□□□ -1.22
TRIM25-209ENST00000574997 SRBD1Q8N5C6 995 aaKnown RBP7.4□□□□□ -1.22
TRIM25-209ENST00000574997 DNAJB3Q8WWF6 145 aa7.4□□□□□ -1.22
TRIM25-209ENST00000574997 RSPH1Q8WYR4 309 aa7.4□□□□□ -1.22
TRIM25-209ENST00000574997 ZFP91Q96JP5 570 aaPredicted RBP7.4□□□□□ -1.22
TRIM25-209ENST00000574997 CDCA3Q99618 268 aaPredicted RBP7.4□□□□□ -1.22
TRIM25-209ENST00000574997 MXRA8Q9BRK3 442 aa7.4□□□□□ -1.22
TRIM25-209ENST00000574997 CELF4Q9BZC1 486 aaKnown RBP7.4□□□□□ -1.22
TRIM25-209ENST00000574997 IL25Q9H293 177 aa7.4□□□□□ -1.22
TRIM25-209ENST00000574997 BCAS3Q9H6U6 928 aa7.4□□□□□ -1.22
TRIM25-209ENST00000574997 RC3H2Q9HBD1 1191 aaKnown RBP7.4□□□□□ -1.22
TRIM25-209ENST00000574997 CD320Q9NPF0 282 aa7.4□□□□□ -1.22
TRIM25-209ENST00000574997 KCNH7Q9NS40 1196 aa7.4□□□□□ -1.22
TRIM25-209ENST00000574997 C1orf112Q9NSG2 853 aa7.4□□□□□ -1.22
TRIM25-209ENST00000574997 CLDND1Q9NY35 253 aa7.4□□□□□ -1.22
TRIM25-209ENST00000574997 PLAGL2Q9UPG8 496 aa7.4□□□□□ -1.22
TRIM25-209ENST00000574997 RBM8AQ9Y5S9 174 aaKnown RBP7.4□□□□□ -1.22
TRIM25-209ENST00000574997 CDY2AQ9Y6F7 541 aa7.4□□□□□ -1.22
TRIM25-209ENST00000574997 NLRC5Q86WI3 1866 aa7.4□□□□□ -1.23
TRIM25-209ENST00000574997 COL1A2P08123 1366 aa7.39□□□□□ -1.23
TRIM25-209ENST00000574997 IGSF9BQ9UPX0 1349 aa7.39□□□□□ -1.23
TRIM25-209ENST00000574997 CCDC196A0A1B0GTZ2 297 aa7.39□□□□□ -1.23
TRIM25-209ENST00000574997 H3BQ06 376 aaPredicted RBP7.39□□□□□ -1.23
TRIM25-209ENST00000574997 SH2B2O14492 632 aaPredicted RBP7.39□□□□□ -1.23
TRIM25-209ENST00000574997 GPR182O15218 404 aa7.39□□□□□ -1.23
TRIM25-209ENST00000574997 HBP1O60381 514 aa7.39□□□□□ -1.23
TRIM25-209ENST00000574997 EYA4O95677 639 aa7.39□□□□□ -1.23
TRIM25-209ENST00000574997 HMGB1P09429 215 aaKnown RBP7.39□□□□□ -1.23
TRIM25-209ENST00000574997 SRGAP2BP0DMP2 458 aa7.39□□□□□ -1.23
TRIM25-209ENST00000574997 INSRRP14616 1297 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms