RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 DYRK3O43781 588 aa7.13□□□□□ -1.27
SF3B3-214ENST00000572365 CPP00450 1065 aa7.13□□□□□ -1.27
SF3B3-214ENST00000572365 SNRPB2P08579 225 aaKnown RBP7.13□□□□□ -1.27
SF3B3-214ENST00000572365 C6orf222P0C671 652 aaPredicted RBP7.13□□□□□ -1.27
SF3B3-214ENST00000572365 CBX2Q14781 532 aaPredicted RBP7.13□□□□□ -1.27
SF3B3-214ENST00000572365 IFI16Q16666 785 aaKnown RBP7.13□□□□□ -1.27
SF3B3-214ENST00000572365 FNDC3BQ53EP0 1204 aaKnown RBP7.13□□□□□ -1.27
SF3B3-214ENST00000572365 SLC35F1Q5T1Q4 408 aa7.13□□□□□ -1.27
SF3B3-214ENST00000572365 CDKAL1Q5VV42 579 aa7.13□□□□□ -1.27
SF3B3-214ENST00000572365 NETO1Q8TDF5 533 aa7.13□□□□□ -1.27
SF3B3-214ENST00000572365 NINJ1Q92982 152 aa7.13□□□□□ -1.27
SF3B3-214ENST00000572365 HSPA12BQ96MM6 686 aa7.13□□□□□ -1.27
SF3B3-214ENST00000572365 MCMBPQ9BTE3 642 aa7.13□□□□□ -1.27
SF3B3-214ENST00000572365 GLIS2Q9BZE0 524 aaPredicted RBP7.13□□□□□ -1.27
SF3B3-214ENST00000572365 SEMA3GQ9NS98 782 aa7.13□□□□□ -1.27
SF3B3-214ENST00000572365 CEP290O15078 2479 aa7.13□□□□□ -1.27
SF3B3-214ENST00000572365 ADAMTS7Q9UKP4 1686 aa7.12□□□□□ -1.27
SF3B3-214ENST00000572365 INSRP06213 1382 aa7.12□□□□□ -1.27
SF3B3-214ENST00000572365 TCERG1O14776 1098 aaKnown RBP7.12□□□□□ -1.27
SF3B3-214ENST00000572365 MSTNO14793 375 aa7.12□□□□□ -1.27
SF3B3-214ENST00000572365 AURKAO14965 403 aa7.12□□□□□ -1.27
SF3B3-214ENST00000572365 NPHP1O15259 732 aa7.12□□□□□ -1.27
SF3B3-214ENST00000572365 CYP26A1O43174 497 aa7.12□□□□□ -1.27
SF3B3-214ENST00000572365 ZNF205O95201 554 aa7.12□□□□□ -1.27
SF3B3-214ENST00000572365 FOSL1P15407 271 aa7.12□□□□□ -1.27
SF3B3-214ENST00000572365 VAV1P15498 845 aa7.12□□□□□ -1.27
SF3B3-214ENST00000572365 MAP2K2P36507 400 aa7.12□□□□□ -1.27
SF3B3-214ENST00000572365 TNNT2P45379 298 aaPredicted RBP7.12□□□□□ -1.27
SF3B3-214ENST00000572365 NOP2P46087 812 aaKnown RBP7.12□□□□□ -1.27
SF3B3-214ENST00000572365 FXR1P51114 621 aaKnown RBP eCLIP7.12□□□□□ -1.27
SF3B3-214ENST00000572365 PABPC4Q13310 644 aaKnown RBP eCLIP7.12□□□□□ -1.27
SF3B3-214ENST00000572365 DPY19L1Q2PZI1 675 aa7.12□□□□□ -1.27
SF3B3-214ENST00000572365 TRIM61Q5EBN2 209 aa7.12□□□□□ -1.27
SF3B3-214ENST00000572365 PLD6Q8N2A8 252 aaKnown RBP7.12□□□□□ -1.27
SF3B3-214ENST00000572365 TMEM145Q8NBT3 493 aa7.12□□□□□ -1.27
SF3B3-214ENST00000572365 COPS5Q92905 334 aa7.12□□□□□ -1.27
SF3B3-214ENST00000572365 FCRL3Q96P31 734 aaPredicted RBP7.12□□□□□ -1.27
SF3B3-214ENST00000572365 SLC12A9Q9BXP2 914 aa7.12□□□□□ -1.27
SF3B3-214ENST00000572365 SPC25Q9HBM1 224 aa7.12□□□□□ -1.27
SF3B3-214ENST00000572365 NARFQ9UHQ1 456 aa7.12□□□□□ -1.27
SF3B3-214ENST00000572365 ZBTB1Q9Y2K1 713 aa7.12□□□□□ -1.27
SF3B3-214ENST00000572365 ADAMTSL1Q8N6G6 1762 aa7.12□□□□□ -1.27
SF3B3-214ENST00000572365 TJP1Q07157 1748 aa7.12□□□□□ -1.27
SF3B3-214ENST00000572365 BRCA2P51587 3418 aa7.12□□□□□ -1.27
SF3B3-214ENST00000572365 KIAA0100Q14667 2235 aaKnown RBP7.12□□□□□ -1.27
SF3B3-214ENST00000572365 PITPNM2Q9BZ72 1349 aa7.11□□□□□ -1.27
SF3B3-214ENST00000572365 NRXN2Q9P2S2 1712 aa7.11□□□□□ -1.27
SF3B3-214ENST00000572365 TMEM265A0A087WTH1 108 aa7.11□□□□□ -1.27
SF3B3-214ENST00000572365 ST20-MTHFSA0A0A6YYL1 179 aa7.11□□□□□ -1.27
SF3B3-214ENST00000572365 WASH4PA8MWX3 477 aa7.11□□□□□ -1.27
SF3B3-214ENST00000572365 ERVV-2B6SEH9 535 aa7.11□□□□□ -1.27
SF3B3-214ENST00000572365 H3BS24 57 aa7.11□□□□□ -1.27
SF3B3-214ENST00000572365 STXBP3O00186 592 aa7.11□□□□□ -1.27
SF3B3-214ENST00000572365 DNAJC6O75061 913 aa7.11□□□□□ -1.27
SF3B3-214ENST00000572365 CD3EP07766 207 aa7.11□□□□□ -1.27
SF3B3-214ENST00000572365 TPP2P29144 1249 aaPredicted RBP7.11□□□□□ -1.27
SF3B3-214ENST00000572365 KCNJ6P48051 423 aa7.11□□□□□ -1.27
SF3B3-214ENST00000572365 MASP1P48740 699 aa7.11□□□□□ -1.27
SF3B3-214ENST00000572365 MTHFSP49914 203 aa7.11□□□□□ -1.27
SF3B3-214ENST00000572365 SCRN1Q12765 414 aa7.11□□□□□ -1.27
SF3B3-214ENST00000572365 NTRK3Q16288 839 aa7.11□□□□□ -1.27
SF3B3-214ENST00000572365 PRR5LQ6MZQ0 368 aa7.11□□□□□ -1.27
SF3B3-214ENST00000572365 ZNF530Q6P9A1 599 aaPredicted RBP7.11□□□□□ -1.27
SF3B3-214ENST00000572365 TMPRSS7Q7RTY8 843 aa7.11□□□□□ -1.27
SF3B3-214ENST00000572365 FILIP1Q7Z7B0 1213 aa7.11□□□□□ -1.27
SF3B3-214ENST00000572365 SAPCD2Q86UD0 394 aa7.11□□□□□ -1.27
SF3B3-214ENST00000572365 PNMA8AQ86V59 439 aaPredicted RBP7.11□□□□□ -1.27
SF3B3-214ENST00000572365 KREMEN2Q8NCW0 462 aa7.11□□□□□ -1.27
SF3B3-214ENST00000572365 SLC17A8Q8NDX2 589 aa7.11□□□□□ -1.27
SF3B3-214ENST00000572365 MFSD3Q96ES6 412 aa7.11□□□□□ -1.27
SF3B3-214ENST00000572365 BRINP2Q9C0B6 783 aa7.11□□□□□ -1.27
SF3B3-214ENST00000572365 IFT57Q9NWB7 429 aa7.11□□□□□ -1.27
SF3B3-214ENST00000572365 ZSWIM5Q9P217 1185 aa7.11□□□□□ -1.27
SF3B3-214ENST00000572365 RNF112Q9ULX5 631 aa7.11□□□□□ -1.27
SF3B3-214ENST00000572365 BACE2Q9Y5Z0 518 aa7.11□□□□□ -1.27
SF3B3-214ENST00000572365 SOS1Q07889 1333 aaPredicted RBP7.1□□□□□ -1.27
SF3B3-214ENST00000572365 C2orf71A6NGG8 1288 aa7.1□□□□□ -1.27
SF3B3-214ENST00000572365 VIL1P09327 827 aaKnown RBP7.1□□□□□ -1.27
SF3B3-214ENST00000572365 CYP19A1P11511 503 aaPredicted RBP7.1□□□□□ -1.27
SF3B3-214ENST00000572365 PDE6BP35913 854 aa7.1□□□□□ -1.27
SF3B3-214ENST00000572365 ECI1P42126 302 aa7.1□□□□□ -1.27
SF3B3-214ENST00000572365 PCBP3P57721 371 aaKnown RBP7.1□□□□□ -1.27
SF3B3-214ENST00000572365 GABREP78334 506 aa7.1□□□□□ -1.27
SF3B3-214ENST00000572365 TESK1Q15569 626 aa7.1□□□□□ -1.27
SF3B3-214ENST00000572365 PTPROQ16827 1216 aa7.1□□□□□ -1.27
SF3B3-214ENST00000572365 TM4SF20Q53R12 229 aa7.1□□□□□ -1.27
SF3B3-214ENST00000572365 DENND5AQ6IQ26 1287 aa7.1□□□□□ -1.27
SF3B3-214ENST00000572365 RCSD1Q6JBY9 416 aa7.1□□□□□ -1.27
SF3B3-214ENST00000572365 NIM1KQ8IY84 436 aa7.1□□□□□ -1.27
SF3B3-214ENST00000572365 GSTCDQ8NEC7 633 aa7.1□□□□□ -1.27
SF3B3-214ENST00000572365 NPLOC4Q8TAT6 608 aa7.1□□□□□ -1.27
SF3B3-214ENST00000572365 UBE2FQ969M7 185 aa7.1□□□□□ -1.27
SF3B3-214ENST00000572365 GPATCH3Q96I76 525 aa7.1□□□□□ -1.27
SF3B3-214ENST00000572365 CLUHP3Q96NS8 147 aa7.1□□□□□ -1.27
SF3B3-214ENST00000572365 ZC3H7BQ9UGR2 993 aaKnown RBP7.1□□□□□ -1.27
SF3B3-214ENST00000572365 TCFL5Q9UL49 500 aa7.1□□□□□ -1.27
SF3B3-214ENST00000572365 SCN11AQ9UI33 1791 aa7.1□□□□□ -1.27
SF3B3-214ENST00000572365 CUL9Q8IWT3 2517 aa7.09□□□□□ -1.27
SF3B3-214ENST00000572365 SHTN1A0MZ66 631 aa7.09□□□□□ -1.27
SF3B3-214ENST00000572365 THBDP07204 575 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms