RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 NIPA1Q7RTP0 329 aa16.7■□□□□ 0.26
FANCA-220ENST00000566409 PLA2G4DQ86XP0 818 aa16.7■□□□□ 0.26
FANCA-220ENST00000566409 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.7■□□□□ 0.26
FANCA-220ENST00000566409 ZBTB10Q96DT7 871 aa16.7■□□□□ 0.26
FANCA-220ENST00000566409 PDRG1Q9NUG6 133 aa16.7■□□□□ 0.26
FANCA-220ENST00000566409 LOXHD1Q8IVV2 1947 aa16.7■□□□□ 0.26
FANCA-220ENST00000566409 LCHNA4D1U4 455 aa16.69■□□□□ 0.26
FANCA-220ENST00000566409 MBLAC1A4D2B0 266 aaPredicted RBP16.69■□□□□ 0.26
FANCA-220ENST00000566409 EPOPA6NHQ4 379 aa16.69■□□□□ 0.26
FANCA-220ENST00000566409 CAND2O75155 1236 aa16.69■□□□□ 0.26
FANCA-220ENST00000566409 CHRNA1P02708 482 aa16.69■□□□□ 0.26
FANCA-220ENST00000566409 GNA11P29992 359 aa16.69■□□□□ 0.26
FANCA-220ENST00000566409 ZNF76P36508 570 aa16.69■□□□□ 0.26
FANCA-220ENST00000566409 KCNJ6P48051 423 aa16.69■□□□□ 0.26
FANCA-220ENST00000566409 AKAP17AQ02040 695 aaKnown RBP16.69■□□□□ 0.26
FANCA-220ENST00000566409 TAP1Q03518 808 aa16.69■□□□□ 0.26
FANCA-220ENST00000566409 IKBKEQ14164 716 aa16.69■□□□□ 0.26
FANCA-220ENST00000566409 FAM26DQ5JW98 314 aa16.69■□□□□ 0.26
FANCA-220ENST00000566409 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.69■□□□□ 0.26
FANCA-220ENST00000566409 CCDC12Q8WUD4 166 aaPredicted RBP16.69■□□□□ 0.26
FANCA-220ENST00000566409 SDF4Q9BRK5 362 aa16.69■□□□□ 0.26
FANCA-220ENST00000566409 MYH9P35579 1960 aaKnown RBP16.69■□□□□ 0.26
FANCA-220ENST00000566409 XIRP2A4UGR9 3374 aa16.68■□□□□ 0.26
FANCA-220ENST00000566409 IGKV6D-21A0A0A0MT36 114 aa16.68■□□□□ 0.26
FANCA-220ENST00000566409 RFXAPO00287 272 aa16.68■□□□□ 0.26
FANCA-220ENST00000566409 INSRRP14616 1297 aa16.68■□□□□ 0.26
FANCA-220ENST00000566409 STK3Q13188 491 aa16.68■□□□□ 0.26
FANCA-220ENST00000566409 PLCB4Q15147 1175 aa16.68■□□□□ 0.26
FANCA-220ENST00000566409 ABHD15Q6UXT9 468 aa16.68■□□□□ 0.26
FANCA-220ENST00000566409 PLPPR4Q7Z2D5 763 aa16.68■□□□□ 0.26
FANCA-220ENST00000566409 RPAINQ86UA6 219 aa16.68■□□□□ 0.26
FANCA-220ENST00000566409 LENG9Q96B70 501 aa16.68■□□□□ 0.26
FANCA-220ENST00000566409 AIFM3Q96NN9 605 aa16.68■□□□□ 0.26
FANCA-220ENST00000566409 GAS2L1Q99501 681 aaPredicted RBP16.68■□□□□ 0.26
FANCA-220ENST00000566409 CERS4Q9HA82 394 aa16.68■□□□□ 0.26
FANCA-220ENST00000566409 EVPLQ92817 2033 aa16.67■□□□□ 0.26
FANCA-220ENST00000566409 DDX39AO00148 427 aaKnown RBP16.67■□□□□ 0.26
FANCA-220ENST00000566409 IPO5O00410 1097 aaKnown RBP16.67■□□□□ 0.26
FANCA-220ENST00000566409 TLL1O43897 1013 aa16.67■□□□□ 0.26
FANCA-220ENST00000566409 DTNBO60941 627 aa16.67■□□□□ 0.26
FANCA-220ENST00000566409 GJB5O95377 273 aa16.67■□□□□ 0.26
FANCA-220ENST00000566409 CIITAP33076 1130 aa16.67■□□□□ 0.26
FANCA-220ENST00000566409 STAT5BP51692 787 aa16.67■□□□□ 0.26
FANCA-220ENST00000566409 SSRP1Q08945 709 aaKnown RBP16.67■□□□□ 0.26
FANCA-220ENST00000566409 MGAT3Q09327 533 aa16.67■□□□□ 0.26
FANCA-220ENST00000566409 NPY5RQ15761 445 aa16.67■□□□□ 0.26
FANCA-220ENST00000566409 MCTP2Q6DN12 878 aa16.67■□□□□ 0.26
FANCA-220ENST00000566409 TRAPPC12Q8WVT3 735 aa16.67■□□□□ 0.26
FANCA-220ENST00000566409 PRDM6Q9NQX0 595 aa16.67■□□□□ 0.26
FANCA-220ENST00000566409 SH3GLB2Q9NR46 395 aa16.67■□□□□ 0.26
FANCA-220ENST00000566409 TUBE1Q9UJT0 475 aa16.67■□□□□ 0.26
FANCA-220ENST00000566409 KIF28PB7ZC32 967 aa16.66■□□□□ 0.26
FANCA-220ENST00000566409 DLL1O00548 723 aa16.66■□□□□ 0.26
FANCA-220ENST00000566409 EFCAB14O75071 495 aa16.66■□□□□ 0.26
FANCA-220ENST00000566409 IGBP1P78318 339 aa16.66■□□□□ 0.26
FANCA-220ENST00000566409 SCRN1Q12765 414 aa16.66■□□□□ 0.26
FANCA-220ENST00000566409 TAF2Q6P1X5 1199 aa16.66■□□□□ 0.26
FANCA-220ENST00000566409 CCDC60Q8IWA6 550 aaPredicted RBP16.66■□□□□ 0.26
FANCA-220ENST00000566409 CCDC148Q8NFR7 591 aa16.66■□□□□ 0.26
FANCA-220ENST00000566409 BICD2Q8TD16 824 aa16.66■□□□□ 0.26
FANCA-220ENST00000566409 DNAJB3Q8WWF6 145 aa16.66■□□□□ 0.26
FANCA-220ENST00000566409 AZI2Q9H6S1 392 aa16.66■□□□□ 0.26
FANCA-220ENST00000566409 TPCN1Q9ULQ1 816 aa16.66■□□□□ 0.26
FANCA-220ENST00000566409 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.65■□□□□ 0.26
FANCA-220ENST00000566409 M0R2N6 131 aa16.65■□□□□ 0.26
FANCA-220ENST00000566409 SEC24BO95487 1268 aa16.65■□□□□ 0.26
FANCA-220ENST00000566409 ATP4AP20648 1035 aa16.65■□□□□ 0.26
FANCA-220ENST00000566409 IGFBP4P22692 258 aa16.65■□□□□ 0.26
FANCA-220ENST00000566409 NLRP5P59047 1200 aa16.65■□□□□ 0.26
FANCA-220ENST00000566409 PRR16Q569H4 304 aa16.65■□□□□ 0.26
FANCA-220ENST00000566409 FAM117BQ6P1L5 589 aa16.65■□□□□ 0.26
FANCA-220ENST00000566409 TRIM22Q8IYM9 498 aa16.65■□□□□ 0.26
FANCA-220ENST00000566409 PPM1EQ8WY54 764 aa16.65■□□□□ 0.26
FANCA-220ENST00000566409 IL17RAQ96F46 866 aa16.65■□□□□ 0.26
FANCA-220ENST00000566409 RAD9AQ99638 391 aa16.65■□□□□ 0.26
FANCA-220ENST00000566409 ZNF577Q9BSK1 485 aa16.65■□□□□ 0.26
FANCA-220ENST00000566409 ZBED2Q9BTP6 218 aa16.65■□□□□ 0.26
FANCA-220ENST00000566409 NCOR1O75376 2440 aa16.64■□□□□ 0.25
FANCA-220ENST00000566409 RRN3P2A6NIE6 340 aa16.64■□□□□ 0.25
FANCA-220ENST00000566409 CPLX1O14810 134 aa16.64■□□□□ 0.25
FANCA-220ENST00000566409 DEXIO95424 95 aa16.64■□□□□ 0.25
FANCA-220ENST00000566409 ANAPC15P60006 121 aa16.64■□□□□ 0.25
FANCA-220ENST00000566409 LPIN1Q14693 890 aa16.64■□□□□ 0.25
FANCA-220ENST00000566409 CCDC85BQ15834 202 aaPredicted RBP16.64■□□□□ 0.25
FANCA-220ENST00000566409 ARNTL2Q8WYA1 636 aa16.64■□□□□ 0.25
FANCA-220ENST00000566409 SEPT8Q92599 483 aa16.64■□□□□ 0.25
FANCA-220ENST00000566409 FAM49AQ9H0Q0 323 aaPredicted RBP16.64■□□□□ 0.25
FANCA-220ENST00000566409 PCDHA4Q9UN74 947 aa16.64■□□□□ 0.25
FANCA-220ENST00000566409 TRPC6Q9Y210 931 aa16.64■□□□□ 0.25
FANCA-220ENST00000566409 COL4A4P53420 1690 aaPredicted RBP16.64■□□□□ 0.25
FANCA-220ENST00000566409 BRWD1Q9NSI6 2320 aa16.64■□□□□ 0.25
FANCA-220ENST00000566409 BDP1A6H8Y1 2624 aa16.64■□□□□ 0.25
FANCA-220ENST00000566409 MUC3AQ02505 3323 aa16.63■□□□□ 0.25
FANCA-220ENST00000566409 POTEB3A0JP26 581 aa16.63■□□□□ 0.25
FANCA-220ENST00000566409 ZBTB42B2RXF5 422 aa16.63■□□□□ 0.25
FANCA-220ENST00000566409 LPXNO60711 386 aa16.63■□□□□ 0.25
FANCA-220ENST00000566409 PFKFB2O60825 505 aa16.63■□□□□ 0.25
FANCA-220ENST00000566409 CTDNEP1O95476 244 aa16.63■□□□□ 0.25
FANCA-220ENST00000566409 GHRP10912 638 aa16.63■□□□□ 0.25
FANCA-220ENST00000566409 POU3F3P20264 500 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms