RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 POTEMA6NI47 508 aa18.54■□□□□ 0.56
TPM1-219ENST00000559397 EML1O00423 815 aa18.54■□□□□ 0.56
TPM1-219ENST00000559397 KRT76Q01546 638 aa18.54■□□□□ 0.56
TPM1-219ENST00000559397 PNOCQ13519 176 aa18.54■□□□□ 0.56
TPM1-219ENST00000559397 MTFR1Q15390 333 aa18.54■□□□□ 0.56
TPM1-219ENST00000559397 TMEM266Q2M3C6 531 aa18.54■□□□□ 0.56
TPM1-219ENST00000559397 HSDL1Q3SXM5 330 aa18.54■□□□□ 0.56
TPM1-219ENST00000559397 TLK2Q86UE8 772 aa18.54■□□□□ 0.56
TPM1-219ENST00000559397 ZNF333Q96JL9 665 aa18.54■□□□□ 0.56
TPM1-219ENST00000559397 UNC93B1Q9H1C4 597 aa18.54■□□□□ 0.56
TPM1-219ENST00000559397 CBX8Q9HC52 389 aa18.54■□□□□ 0.56
TPM1-219ENST00000559397 DYNC1LI2O43237 492 aaPredicted RBP18.53■□□□□ 0.56
TPM1-219ENST00000559397 CHMP2AO43633 222 aa18.53■□□□□ 0.56
TPM1-219ENST00000559397 ATG7O95352 703 aa18.53■□□□□ 0.56
TPM1-219ENST00000559397 RARBP10826 455 aa18.53■□□□□ 0.56
TPM1-219ENST00000559397 ZNF165P49910 485 aa18.53■□□□□ 0.56
TPM1-219ENST00000559397 NLRP12P59046 1061 aa18.53■□□□□ 0.56
TPM1-219ENST00000559397 ACTR2P61160 394 aa18.53■□□□□ 0.56
TPM1-219ENST00000559397 POSTNQ15063 836 aa18.53■□□□□ 0.56
TPM1-219ENST00000559397 NT5DC1Q5TFE4 455 aa18.53■□□□□ 0.56
TPM1-219ENST00000559397 IQUBQ8NA54 791 aa18.53■□□□□ 0.56
TPM1-219ENST00000559397 DHX58Q96C10 678 aa18.53■□□□□ 0.56
TPM1-219ENST00000559397 SPATA33Q96N06 139 aa18.53■□□□□ 0.56
TPM1-219ENST00000559397 GPR20Q99678 358 aa18.53■□□□□ 0.56
TPM1-219ENST00000559397 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.53■□□□□ 0.56
TPM1-219ENST00000559397 PAK6Q9NQU5 681 aaPredicted RBP18.53■□□□□ 0.56
TPM1-219ENST00000559397 FRMPD3Q5JV73 1810 aa18.52■□□□□ 0.56
TPM1-219ENST00000559397 GSTTP1A0A1W2PQM5 241 aa18.52■□□□□ 0.56
TPM1-219ENST00000559397 TXLNAP40222 546 aa18.52■□□□□ 0.56
TPM1-219ENST00000559397 SARSP49591 514 aaKnown RBP18.52■□□□□ 0.56
TPM1-219ENST00000559397 GJA9P57773 515 aa18.52■□□□□ 0.56
TPM1-219ENST00000559397 NKX3-2P78367 333 aa18.52■□□□□ 0.56
TPM1-219ENST00000559397 SP4Q02446 784 aa18.52■□□□□ 0.56
TPM1-219ENST00000559397 LHX8Q68G74 356 aa18.52■□□□□ 0.56
TPM1-219ENST00000559397 NCAPH2Q6IBW4 605 aa18.52■□□□□ 0.56
TPM1-219ENST00000559397 ABHD15Q6UXT9 468 aa18.52■□□□□ 0.56
TPM1-219ENST00000559397 C11orf57Q6ZUT1 292 aaPredicted RBP18.52■□□□□ 0.56
TPM1-219ENST00000559397 SMAP1Q8IYB5 467 aaPredicted RBP18.52■□□□□ 0.56
TPM1-219ENST00000559397 PPTC7Q8NI37 304 aa18.52■□□□□ 0.56
TPM1-219ENST00000559397 SPATA20Q8TB22 786 aa18.52■□□□□ 0.56
TPM1-219ENST00000559397 AFG1LQ8WV93 481 aa18.52■□□□□ 0.56
TPM1-219ENST00000559397 CCDC34Q96HJ3 373 aa18.52■□□□□ 0.56
TPM1-219ENST00000559397 PPP1R9BQ96SB3 815 aa18.52■□□□□ 0.56
TPM1-219ENST00000559397 MCOLN1Q9GZU1 580 aa18.52■□□□□ 0.56
TPM1-219ENST00000559397 UPF3AQ9H1J1 476 aaKnown RBP18.52■□□□□ 0.56
TPM1-219ENST00000559397 PCDHA5Q9Y5H7 936 aa18.52■□□□□ 0.56
TPM1-219ENST00000559397 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.51■□□□□ 0.55
TPM1-219ENST00000559397 WDR64B1ANS9 1081 aa18.51■□□□□ 0.55
TPM1-219ENST00000559397 MSCO60682 206 aa18.51■□□□□ 0.55
TPM1-219ENST00000559397 CCL5P13501 91 aa18.51■□□□□ 0.55
TPM1-219ENST00000559397 IRX5P78411 483 aaPredicted RBP18.51■□□□□ 0.55
TPM1-219ENST00000559397 IQCB1Q15051 598 aa18.51■□□□□ 0.55
TPM1-219ENST00000559397 PDXDC2PQ6P474 469 aa18.51■□□□□ 0.55
TPM1-219ENST00000559397 RDM1Q8NG50 284 aa18.51■□□□□ 0.55
TPM1-219ENST00000559397 ANP32BQ92688 251 aaKnown RBP18.51■□□□□ 0.55
TPM1-219ENST00000559397 PAGE5Q96GU1 130 aa18.51■□□□□ 0.55
TPM1-219ENST00000559397 RAB34Q9BZG1 259 aa18.51■□□□□ 0.55
TPM1-219ENST00000559397 DISC1Q9NRI5 854 aa18.51■□□□□ 0.55
TPM1-219ENST00000559397 LRWD1Q9UFC0 647 aa18.51■□□□□ 0.55
TPM1-219ENST00000559397 SYNRGQ9UMZ2 1314 aa18.51■□□□□ 0.55
TPM1-219ENST00000559397 WDR81Q562E7 1941 aa18.51■□□□□ 0.55
TPM1-219ENST00000559397 A0A087WWV3 80 aa18.5■□□□□ 0.55
TPM1-219ENST00000559397 A6NJR5 290 aa18.5■□□□□ 0.55
TPM1-219ENST00000559397 PP2D1A8MPX8 630 aa18.5■□□□□ 0.55
TPM1-219ENST00000559397 ADAMTS4O75173 837 aa18.5■□□□□ 0.55
TPM1-219ENST00000559397 PRR29P0C7W0 189 aa18.5■□□□□ 0.55
TPM1-219ENST00000559397 SFNP31947 248 aa18.5■□□□□ 0.55
TPM1-219ENST00000559397 UBA7P41226 1012 aa18.5■□□□□ 0.55
TPM1-219ENST00000559397 JAK3P52333 1124 aa18.5■□□□□ 0.55
TPM1-219ENST00000559397 EPHA7Q15375 998 aa18.5■□□□□ 0.55
TPM1-219ENST00000559397 MIER3Q7Z3K6 550 aa18.5■□□□□ 0.55
TPM1-219ENST00000559397 CEP57L1Q8IYX8 460 aa18.5■□□□□ 0.55
TPM1-219ENST00000559397 SEPT1Q8WYJ6 367 aa18.5■□□□□ 0.55
TPM1-219ENST00000559397 PDLIM2Q96JY6 352 aa18.5■□□□□ 0.55
TPM1-219ENST00000559397 AP5M1Q9H0R1 490 aa18.5■□□□□ 0.55
TPM1-219ENST00000559397 TCEAL9Q9UHQ7 104 aa18.5■□□□□ 0.55
TPM1-219ENST00000559397 IGKV6D-21A0A0A0MT36 114 aa18.5■□□□□ 0.55
TPM1-219ENST00000559397 NOP56O00567 594 aaKnown RBP18.5■□□□□ 0.55
TPM1-219ENST00000559397 MMP3P08254 477 aa18.5■□□□□ 0.55
TPM1-219ENST00000559397 HOXD8P13378 290 aaPredicted RBP18.5■□□□□ 0.55
TPM1-219ENST00000559397 CDC25AP30304 524 aa18.5■□□□□ 0.55
TPM1-219ENST00000559397 CCDC173Q0VFZ6 552 aa18.5■□□□□ 0.55
TPM1-219ENST00000559397 DPCR1Q3MIW9 517 aa18.5■□□□□ 0.55
TPM1-219ENST00000559397 MMTAG2Q9BU76 263 aaKnown RBP18.5■□□□□ 0.55
TPM1-219ENST00000559397 XPNPEP3Q9NQH7 507 aa18.5■□□□□ 0.55
TPM1-219ENST00000559397 PCDHA10Q9Y5I2 948 aa18.5■□□□□ 0.55
TPM1-219ENST00000559397 MYADML2A6NDP7 307 aa18.49■□□□□ 0.55
TPM1-219ENST00000559397 PGK1P00558 417 aa18.49■□□□□ 0.55
TPM1-219ENST00000559397 MYCP01106 439 aaPredicted RBP18.49■□□□□ 0.55
TPM1-219ENST00000559397 SUPT20HL2P0C7V6 817 aa18.49■□□□□ 0.55
TPM1-219ENST00000559397 TCF7P36402 384 aaPredicted RBP18.49■□□□□ 0.55
TPM1-219ENST00000559397 KARSQ15046 597 aaKnown RBP18.49■□□□□ 0.55
TPM1-219ENST00000559397 ZRSR1Q15695 479 aaKnown RBP18.49■□□□□ 0.55
TPM1-219ENST00000559397 NAALADL2Q58DX5 795 aa18.49■□□□□ 0.55
TPM1-219ENST00000559397 LUZP1Q86V48 1076 aa18.49■□□□□ 0.55
TPM1-219ENST00000559397 GRAMD1CQ8IYS0 662 aa18.49■□□□□ 0.55
TPM1-219ENST00000559397 KLHDC9Q8NEP7 349 aa18.49■□□□□ 0.55
TPM1-219ENST00000559397 PCYT2Q99447 389 aa18.49■□□□□ 0.55
TPM1-219ENST00000559397 HSD17B14Q9BPX1 270 aa18.49■□□□□ 0.55
TPM1-219ENST00000559397 EIF2AK1Q9BQI3 630 aaKnown RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms