RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 HIP1RO75146 1068 aa4.68□□□□□ -1.66
SRP54-209ENST00000555746 FKBP9O95302 570 aa4.68□□□□□ -1.66
SRP54-209ENST00000555746 C4BPAP04003 597 aaKnown RBP4.68□□□□□ -1.66
SRP54-209ENST00000555746 FAHP16930 419 aa4.68□□□□□ -1.66
SRP54-209ENST00000555746 CDK11BP21127 795 aaKnown RBP4.68□□□□□ -1.66
SRP54-209ENST00000555746 HERVK_113P62684 666 aa4.68□□□□□ -1.66
SRP54-209ENST00000555746 SART3Q15020 963 aaKnown RBP4.68□□□□□ -1.66
SRP54-209ENST00000555746 SEC23AQ15436 765 aa4.68□□□□□ -1.66
SRP54-209ENST00000555746 PAN2Q504Q3 1202 aaKnown RBP4.68□□□□□ -1.66
SRP54-209ENST00000555746 XP32Q5T750 250 aa4.68□□□□□ -1.66
SRP54-209ENST00000555746 RNF219Q5W0B1 726 aaPredicted RBP4.68□□□□□ -1.66
SRP54-209ENST00000555746 BTBD8Q5XKL5 378 aa4.68□□□□□ -1.66
SRP54-209ENST00000555746 CPZQ66K79 652 aa4.68□□□□□ -1.66
SRP54-209ENST00000555746 ETV3LQ6ZN32 361 aa4.68□□□□□ -1.66
SRP54-209ENST00000555746 EP400NLQ6ZTU2 488 aa4.68□□□□□ -1.66
SRP54-209ENST00000555746 FKBP9P1Q75LS8 142 aa4.68□□□□□ -1.66
SRP54-209ENST00000555746 ZNF605Q86T29 641 aa4.68□□□□□ -1.66
SRP54-209ENST00000555746 RBM12BQ8IXT5 1001 aaKnown RBP4.68□□□□□ -1.66
SRP54-209ENST00000555746 CHTF18Q8WVB6 975 aa4.68□□□□□ -1.66
SRP54-209ENST00000555746 ALG3Q92685 438 aa4.68□□□□□ -1.66
SRP54-209ENST00000555746 SCYL1Q96KG9 808 aa4.68□□□□□ -1.66
SRP54-209ENST00000555746 MCOLN1Q9GZU1 580 aa4.68□□□□□ -1.66
SRP54-209ENST00000555746 EPB41L4BQ9H329 900 aa4.68□□□□□ -1.66
SRP54-209ENST00000555746 NSUN3Q9H649 340 aaKnown RBP4.68□□□□□ -1.66
SRP54-209ENST00000555746 NGRNQ9NPE2 291 aaKnown RBP4.68□□□□□ -1.66
SRP54-209ENST00000555746 DCP1AQ9NPI6 582 aaPredicted RBP4.68□□□□□ -1.66
SRP54-209ENST00000555746 OXSMQ9NWU1 459 aa4.68□□□□□ -1.66
SRP54-209ENST00000555746 MBD1Q9UIS9 605 aaPredicted RBP4.68□□□□□ -1.66
SRP54-209ENST00000555746 PLA2G2DQ9UNK4 145 aa4.68□□□□□ -1.66
SRP54-209ENST00000555746 CEP170Q5SW79 1584 aa4.68□□□□□ -1.66
SRP54-209ENST00000555746 ABCC8Q09428 1581 aa4.67□□□□□ -1.66
SRP54-209ENST00000555746 PTPRTO14522 1441 aa4.67□□□□□ -1.66
SRP54-209ENST00000555746 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.67□□□□□ -1.66
SRP54-209ENST00000555746 SCDO00767 359 aa4.67□□□□□ -1.66
SRP54-209ENST00000555746 GPR39O43194 453 aa4.67□□□□□ -1.66
SRP54-209ENST00000555746 SEMA7AO75326 666 aa4.67□□□□□ -1.66
SRP54-209ENST00000555746 LRG1P02750 347 aa4.67□□□□□ -1.66
SRP54-209ENST00000555746 ASGR2P07307 311 aa4.67□□□□□ -1.66
SRP54-209ENST00000555746 NCAM1P13591 858 aa4.67□□□□□ -1.66
SRP54-209ENST00000555746 FNTBP49356 437 aa4.67□□□□□ -1.66
SRP54-209ENST00000555746 CDKN1CP49918 316 aaPredicted RBP4.67□□□□□ -1.66
SRP54-209ENST00000555746 KPNA1P52294 538 aaPredicted RBP4.67□□□□□ -1.66
SRP54-209ENST00000555746 ANAPC15P60006 121 aa4.67□□□□□ -1.66
SRP54-209ENST00000555746 IL2P60568 153 aa4.67□□□□□ -1.66
SRP54-209ENST00000555746 SRSF3P84103 164 aaKnown RBP4.67□□□□□ -1.66
SRP54-209ENST00000555746 ZNF200P98182 395 aaPredicted RBP4.67□□□□□ -1.66
SRP54-209ENST00000555746 STAT4Q14765 748 aa4.67□□□□□ -1.66
SRP54-209ENST00000555746 ZNF174Q15697 407 aa4.67□□□□□ -1.66
SRP54-209ENST00000555746 CR1LQ2VPA4 569 aa4.67□□□□□ -1.66
SRP54-209ENST00000555746 LDHDQ86WU2 507 aa4.67□□□□□ -1.66
SRP54-209ENST00000555746 KIAA1958Q8N8K9 716 aa4.67□□□□□ -1.66
SRP54-209ENST00000555746 PRPF38AQ8NAV1 312 aaKnown RBP4.67□□□□□ -1.66
SRP54-209ENST00000555746 FBXO15Q8NCQ5 510 aaPredicted RBP4.67□□□□□ -1.66
SRP54-209ENST00000555746 WDR66Q8TBY9 1149 aa4.67□□□□□ -1.66
SRP54-209ENST00000555746 TOE1Q96GM8 510 aaKnown RBP4.67□□□□□ -1.66
SRP54-209ENST00000555746 CNTD2Q9H8S5 307 aa4.67□□□□□ -1.66
SRP54-209ENST00000555746 EMC7Q9NPA0 242 aa4.67□□□□□ -1.66
SRP54-209ENST00000555746 ACSS2Q9NR19 701 aa4.67□□□□□ -1.66
SRP54-209ENST00000555746 SPTLC3Q9NUV7 552 aa4.67□□□□□ -1.66
SRP54-209ENST00000555746 TYW1Q9NV66 732 aaKnown RBP4.67□□□□□ -1.66
SRP54-209ENST00000555746 THG1LQ9NWX6 298 aaKnown RBP4.67□□□□□ -1.66
SRP54-209ENST00000555746 PCDHA5Q9Y5H7 936 aa4.67□□□□□ -1.66
SRP54-209ENST00000555746 STRCQ7RTU9 1775 aa4.66□□□□□ -1.66
SRP54-209ENST00000555746 LRRC10BA6NIK2 292 aa4.66□□□□□ -1.66
SRP54-209ENST00000555746 ALG1L2C9J202 215 aa4.66□□□□□ -1.66
SRP54-209ENST00000555746 TGM5O43548 720 aa4.66□□□□□ -1.66
SRP54-209ENST00000555746 KRT37O76014 449 aa4.66□□□□□ -1.66
SRP54-209ENST00000555746 CYP17A1P05093 508 aa4.66□□□□□ -1.66
SRP54-209ENST00000555746 IGFBP6P24592 240 aaPredicted RBP4.66□□□□□ -1.66
SRP54-209ENST00000555746 ID4P47928 161 aa4.66□□□□□ -1.66
SRP54-209ENST00000555746 PHC1P78364 1004 aa4.66□□□□□ -1.66
SRP54-209ENST00000555746 GRIN1Q05586 938 aa4.66□□□□□ -1.66
SRP54-209ENST00000555746 CACNB2Q08289 660 aaPredicted RBP4.66□□□□□ -1.66
SRP54-209ENST00000555746 TARBP2Q15633 366 aaKnown RBP4.66□□□□□ -1.66
SRP54-209ENST00000555746 MLANAQ16655 118 aa4.66□□□□□ -1.66
SRP54-209ENST00000555746 GPR158Q5T848 1215 aa4.66□□□□□ -1.66
SRP54-209ENST00000555746 MCTP1Q6DN14 999 aa4.66□□□□□ -1.66
SRP54-209ENST00000555746 TEPPQ6URK8 271 aa4.66□□□□□ -1.66
SRP54-209ENST00000555746 NECAB2Q7Z6G3 386 aa4.66□□□□□ -1.66
SRP54-209ENST00000555746 SPATS2Q86XZ4 545 aaKnown RBP4.66□□□□□ -1.66
SRP54-209ENST00000555746 ATL2Q8NHH9 583 aa4.66□□□□□ -1.66
SRP54-209ENST00000555746 GPR101Q96P66 508 aaPredicted RBP4.66□□□□□ -1.66
SRP54-209ENST00000555746 DIRC2Q96SL1 478 aa4.66□□□□□ -1.66
SRP54-209ENST00000555746 BCAS3Q9H6U6 928 aa4.66□□□□□ -1.66
SRP54-209ENST00000555746 GCM1Q9NP62 436 aa4.66□□□□□ -1.66
SRP54-209ENST00000555746 RIC8BQ9NVN3 520 aa4.66□□□□□ -1.66
SRP54-209ENST00000555746 SIRT5Q9NXA8 310 aa4.66□□□□□ -1.66
SRP54-209ENST00000555746 H2AFY2Q9P0M6 372 aaPredicted RBP4.66□□□□□ -1.66
SRP54-209ENST00000555746 RGS17Q9UGC6 210 aaPredicted RBP4.66□□□□□ -1.66
SRP54-209ENST00000555746 GLI2P10070 1586 aa4.65□□□□□ -1.66
SRP54-209ENST00000555746 MROH2BQ7Z745 1585 aa4.65□□□□□ -1.66
SRP54-209ENST00000555746 SHROOM2Q13796 1616 aa4.65□□□□□ -1.66
SRP54-209ENST00000555746 YEATS2Q9ULM3 1422 aa4.65□□□□□ -1.66
SRP54-209ENST00000555746 N4BP3O15049 544 aa4.65□□□□□ -1.67
SRP54-209ENST00000555746 ULK1O75385 1050 aa4.65□□□□□ -1.67
SRP54-209ENST00000555746 SLC9A1P19634 815 aa4.65□□□□□ -1.67
SRP54-209ENST00000555746 CDR1P51861 262 aa4.65□□□□□ -1.67
SRP54-209ENST00000555746 KIF11P52732 1056 aa4.65□□□□□ -1.67
SRP54-209ENST00000555746 SMAD3P84022 425 aaKnown RBP4.65□□□□□ -1.67
SRP54-209ENST00000555746 SMAD2Q15796 467 aaKnown RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms