RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 WRNIP1Q96S55 665 aa4.46□□□□□ -1.7
SCFD1-213ENST00000554776 RBPJLQ9UBG7 517 aa4.46□□□□□ -1.7
SCFD1-213ENST00000554776 FAM90A27PA6NNH2 459 aa4.45□□□□□ -1.7
SCFD1-213ENST00000554776 B4E1Z4 1266 aa4.45□□□□□ -1.7
SCFD1-213ENST00000554776 OPA1O60313 960 aa4.45□□□□□ -1.7
SCFD1-213ENST00000554776 NOBOXO60393 691 aa4.45□□□□□ -1.7
SCFD1-213ENST00000554776 APPP05067 770 aa4.45□□□□□ -1.7
SCFD1-213ENST00000554776 PTPN1P18031 435 aaKnown RBP4.45□□□□□ -1.7
SCFD1-213ENST00000554776 NCLP19338 710 aaKnown RBP4.45□□□□□ -1.7
SCFD1-213ENST00000554776 POU3F2P20265 443 aaPredicted RBP4.45□□□□□ -1.7
SCFD1-213ENST00000554776 TM4SF20Q53R12 229 aa4.45□□□□□ -1.7
SCFD1-213ENST00000554776 TMEM177Q53S58 311 aa4.45□□□□□ -1.7
SCFD1-213ENST00000554776 FAM26FQ5R3K3 315 aa4.45□□□□□ -1.7
SCFD1-213ENST00000554776 BTBD8Q5XKL5 378 aa4.45□□□□□ -1.7
SCFD1-213ENST00000554776 CD276Q5ZPR3 534 aa4.45□□□□□ -1.7
SCFD1-213ENST00000554776 VASNQ6EMK4 673 aa4.45□□□□□ -1.7
SCFD1-213ENST00000554776 HHIPL2Q6UWX4 724 aa4.45□□□□□ -1.7
SCFD1-213ENST00000554776 FRMD5Q7Z6J6 570 aa4.45□□□□□ -1.7
SCFD1-213ENST00000554776 LRRTM3Q86VH5 581 aa4.45□□□□□ -1.7
SCFD1-213ENST00000554776 ZNF761Q86XN6 746 aaPredicted RBP4.45□□□□□ -1.7
SCFD1-213ENST00000554776 NOSTRINQ8IVI9 506 aa4.45□□□□□ -1.7
SCFD1-213ENST00000554776 DHX37Q8IY37 1157 aaKnown RBP4.45□□□□□ -1.7
SCFD1-213ENST00000554776 ADAMTS17Q8TE56 1095 aa4.45□□□□□ -1.7
SCFD1-213ENST00000554776 MFSD3Q96ES6 412 aa4.45□□□□□ -1.7
SCFD1-213ENST00000554776 ZSWIM3Q96MP5 696 aa4.45□□□□□ -1.7
SCFD1-213ENST00000554776 DLL4Q9NR61 685 aa4.45□□□□□ -1.7
SCFD1-213ENST00000554776 IFT57Q9NWB7 429 aa4.45□□□□□ -1.7
SCFD1-213ENST00000554776 RTEL1Q9NZ71 1219 aa4.45□□□□□ -1.7
SCFD1-213ENST00000554776 SAMD15Q9P1V8 674 aa4.45□□□□□ -1.7
SCFD1-213ENST00000554776 ATP23Q9Y6H3 246 aa4.45□□□□□ -1.7
SCFD1-213ENST00000554776 ZNF839A8K0R7 811 aa4.44□□□□□ -1.7
SCFD1-213ENST00000554776 M0R2C6 588 aa4.44□□□□□ -1.7
SCFD1-213ENST00000554776 KCNK3O14649 394 aa4.44□□□□□ -1.7
SCFD1-213ENST00000554776 CLASP2O75122 1294 aaKnown RBP4.44□□□□□ -1.7
SCFD1-213ENST00000554776 CYP7B1O75881 506 aa4.44□□□□□ -1.7
SCFD1-213ENST00000554776 JMJD7P0C870 316 aa4.44□□□□□ -1.7
SCFD1-213ENST00000554776 KRT15P19012 456 aa4.44□□□□□ -1.7
SCFD1-213ENST00000554776 GJA4P35212 333 aa4.44□□□□□ -1.7
SCFD1-213ENST00000554776 MLLT6P55198 1093 aaPredicted RBP4.44□□□□□ -1.7
SCFD1-213ENST00000554776 NT5DC1Q5TFE4 455 aa4.44□□□□□ -1.7
SCFD1-213ENST00000554776 OTOP1Q7RTM1 612 aa4.44□□□□□ -1.7
SCFD1-213ENST00000554776 DDX53Q86TM3 631 aaKnown RBP4.44□□□□□ -1.7
SCFD1-213ENST00000554776 ORAI3Q9BRQ5 295 aa4.44□□□□□ -1.7
SCFD1-213ENST00000554776 KRTAP4-7Q9BYR0 210 aa4.44□□□□□ -1.7
SCFD1-213ENST00000554776 A0A087X0B3 334 aa4.43□□□□□ -1.7
SCFD1-213ENST00000554776 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.43□□□□□ -1.7
SCFD1-213ENST00000554776 CBX4O00257 560 aa4.43□□□□□ -1.7
SCFD1-213ENST00000554776 TRAF5O00463 557 aa4.43□□□□□ -1.7
SCFD1-213ENST00000554776 DDX3XO00571 662 aaKnown RBP eCLIP4.43□□□□□ -1.72e-7■□□□□ 8.1
SCFD1-213ENST00000554776 C4BPAP04003 597 aaKnown RBP4.43□□□□□ -1.7
SCFD1-213ENST00000554776 ENO2P09104 434 aaPredicted RBP4.43□□□□□ -1.7
SCFD1-213ENST00000554776 COL6A1P12109 1028 aa4.43□□□□□ -1.7
SCFD1-213ENST00000554776 IL13P35225 146 aa4.43□□□□□ -1.7
SCFD1-213ENST00000554776 CTSWP56202 376 aa4.43□□□□□ -1.7
SCFD1-213ENST00000554776 GJA9P57773 515 aa4.43□□□□□ -1.7
SCFD1-213ENST00000554776 PFKPQ01813 784 aa4.43□□□□□ -1.7
SCFD1-213ENST00000554776 DBPQ10586 325 aaPredicted RBP4.43□□□□□ -1.7
SCFD1-213ENST00000554776 SEC23AQ15436 765 aa4.43□□□□□ -1.7
SCFD1-213ENST00000554776 PTPROQ16827 1216 aa4.43□□□□□ -1.7
SCFD1-213ENST00000554776 SKIDA1Q1XH10 827 aa4.43□□□□□ -1.7
SCFD1-213ENST00000554776 RNF187Q5TA31 235 aaPredicted RBP4.43□□□□□ -1.7
SCFD1-213ENST00000554776 PIK3R6Q5UE93 754 aa4.43□□□□□ -1.7
SCFD1-213ENST00000554776 PRAMEF18Q5VWM3 479 aa4.43□□□□□ -1.7
SCFD1-213ENST00000554776 LILRA6Q6PI73 481 aa4.43□□□□□ -1.7
SCFD1-213ENST00000554776 ZDHHC14Q8IZN3 488 aa4.43□□□□□ -1.7
SCFD1-213ENST00000554776 TXNDC5Q8NBS9 432 aaKnown RBP4.43□□□□□ -1.7
SCFD1-213ENST00000554776 CHST14Q8NCH0 376 aa4.43□□□□□ -1.7
SCFD1-213ENST00000554776 ZCCHC14Q8WYQ9 949 aaKnown RBP4.43□□□□□ -1.7
SCFD1-213ENST00000554776 DDX1Q92499 740 aaKnown RBP4.43□□□□□ -1.7
SCFD1-213ENST00000554776 YTHDC1Q96MU7 727 aaKnown RBP4.43□□□□□ -1.7
SCFD1-213ENST00000554776 TEPSINQ96N21 525 aa4.43□□□□□ -1.7
SCFD1-213ENST00000554776 TARS2Q9BW92 718 aaKnown RBP4.43□□□□□ -1.7
SCFD1-213ENST00000554776 SLKQ9H2G2 1235 aaPredicted RBP4.43□□□□□ -1.7
SCFD1-213ENST00000554776 RIC8BQ9NVN3 520 aa4.43□□□□□ -1.7
SCFD1-213ENST00000554776 CROTQ9UKG9 612 aa4.43□□□□□ -1.7
SCFD1-213ENST00000554776 C9orf118A6NHY6 69 aa4.42□□□□□ -1.7
SCFD1-213ENST00000554776 GSG1L2A8MUP6 293 aa4.42□□□□□ -1.7
SCFD1-213ENST00000554776 CHGBP05060 677 aa4.42□□□□□ -1.7
SCFD1-213ENST00000554776 ZBTB48P10074 688 aaPredicted RBP4.42□□□□□ -1.7
SCFD1-213ENST00000554776 FLT3P36888 993 aa4.42□□□□□ -1.7
SCFD1-213ENST00000554776 HERVK_113P62684 666 aa4.42□□□□□ -1.7
SCFD1-213ENST00000554776 NFIXQ14938 502 aa4.42□□□□□ -1.7
SCFD1-213ENST00000554776 RGL3Q3MIN7 710 aa4.42□□□□□ -1.7
SCFD1-213ENST00000554776 ZFYVE27Q5T4F4 411 aa4.42□□□□□ -1.7
SCFD1-213ENST00000554776 CDCA2Q69YH5 1023 aaPredicted RBP4.42□□□□□ -1.7
SCFD1-213ENST00000554776 MCTP2Q6DN12 878 aa4.42□□□□□ -1.7
SCFD1-213ENST00000554776 EP400NLQ6ZTU2 488 aa4.42□□□□□ -1.7
SCFD1-213ENST00000554776 IGDCC4Q8TDY8 1250 aa4.42□□□□□ -1.7
SCFD1-213ENST00000554776 MTFR1LQ9H019 292 aa4.42□□□□□ -1.7
SCFD1-213ENST00000554776 ADAM7Q9H2U9 754 aa4.42□□□□□ -1.7
SCFD1-213ENST00000554776 L2HGDHQ9H9P8 463 aa4.42□□□□□ -1.7
SCFD1-213ENST00000554776 KCND1Q9NSA2 647 aa4.42□□□□□ -1.7
SCFD1-213ENST00000554776 USP40Q9NVE5 1235 aa4.42□□□□□ -1.7
SCFD1-213ENST00000554776 B3GALT1Q9Y5Z6 326 aa4.42□□□□□ -1.7
SCFD1-213ENST00000554776 SLC12A8A0AV02 714 aa4.41□□□□□ -1.7
SCFD1-213ENST00000554776 MROH6A6NGR9 719 aa4.41□□□□□ -1.7
SCFD1-213ENST00000554776 KRTAP9-7A8MTY7 169 aa4.41□□□□□ -1.7
SCFD1-213ENST00000554776 PDE8AO60658 829 aa4.41□□□□□ -1.7
SCFD1-213ENST00000554776 KPNA6O60684 536 aa4.41□□□□□ -1.7
SCFD1-213ENST00000554776 DNAJC6O75061 913 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms