RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 CDKL2Q92772 493 aa17.05■□□□□ 0.32
RBFOX1-212ENST00000550418 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.05■□□□□ 0.32
RBFOX1-212ENST00000550418 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.05■□□□□ 0.32
RBFOX1-212ENST00000550418 REREQ9P2R6 1566 aa17.05■□□□□ 0.32
RBFOX1-212ENST00000550418 MIF4GDA9UHW6 222 aaKnown RBP17.05■□□□□ 0.32
RBFOX1-212ENST00000550418 DIAPH2O60879 1101 aa17.05■□□□□ 0.32
RBFOX1-212ENST00000550418 SPAG7O75391 227 aa17.05■□□□□ 0.32
RBFOX1-212ENST00000550418 MRPS9P82933 396 aaKnown RBP17.05■□□□□ 0.32
RBFOX1-212ENST00000550418 NR1I3Q14994 352 aa17.05■□□□□ 0.32
RBFOX1-212ENST00000550418 KRT26Q7Z3Y9 468 aa17.05■□□□□ 0.32
RBFOX1-212ENST00000550418 LRRC47Q8N1G4 583 aaKnown RBP17.05■□□□□ 0.32
RBFOX1-212ENST00000550418 FLAD1Q8NFF5 587 aa17.05■□□□□ 0.32
RBFOX1-212ENST00000550418 MORC4Q8TE76 937 aa17.05■□□□□ 0.32
RBFOX1-212ENST00000550418 NUDCD1Q96RS6 583 aa17.05■□□□□ 0.32
RBFOX1-212ENST00000550418 EPS15L1Q9UBC2 864 aa17.05■□□□□ 0.32
RBFOX1-212ENST00000550418 TRPC6Q9Y210 931 aa17.05■□□□□ 0.32
RBFOX1-212ENST00000550418 ENO4A6NNW6 628 aa17.04■□□□□ 0.32
RBFOX1-212ENST00000550418 RPS8P62241 208 aaKnown RBP17.04■□□□□ 0.32
RBFOX1-212ENST00000550418 KRT81Q14533 505 aa17.04■□□□□ 0.32
RBFOX1-212ENST00000550418 FAM182BQ5T319 152 aa17.04■□□□□ 0.32
RBFOX1-212ENST00000550418 TTBK2Q6IQ55 1244 aa17.04■□□□□ 0.32
RBFOX1-212ENST00000550418 LRRC31Q6UY01 552 aa17.04■□□□□ 0.32
RBFOX1-212ENST00000550418 XAB2Q9HCS7 855 aaKnown RBP17.04■□□□□ 0.32
RBFOX1-212ENST00000550418 POLD4Q9HCU8 107 aa17.04■□□□□ 0.32
RBFOX1-212ENST00000550418 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.04■□□□□ 0.32
RBFOX1-212ENST00000550418 SYNGAP1Q96PV0 1343 aa17.04■□□□□ 0.32
RBFOX1-212ENST00000550418 BRAFP15056 766 aa17.04■□□□□ 0.32
RBFOX1-212ENST00000550418 GCFC2P16383 781 aaKnown RBP17.04■□□□□ 0.32
RBFOX1-212ENST00000550418 GAP43P17677 238 aa17.04■□□□□ 0.32
RBFOX1-212ENST00000550418 RWDD2BP57060 319 aa17.04■□□□□ 0.32
RBFOX1-212ENST00000550418 FAM83BQ5T0W9 1011 aa17.04■□□□□ 0.32
RBFOX1-212ENST00000550418 PPWD1Q96BP3 646 aaKnown RBP17.04■□□□□ 0.32
RBFOX1-212ENST00000550418 SLITRK6Q9H5Y7 841 aa17.04■□□□□ 0.32
RBFOX1-212ENST00000550418 RFX7Q2KHR2 1363 aa17.04■□□□□ 0.32
RBFOX1-212ENST00000550418 POLR2BP30876 1174 aaKnown RBP17.04■□□□□ 0.32
RBFOX1-212ENST00000550418 RANBP1P43487 201 aa17.04■□□□□ 0.32
RBFOX1-212ENST00000550418 YWHAEP62258 255 aaKnown RBP17.04■□□□□ 0.32
RBFOX1-212ENST00000550418 MMEL1Q495T6 779 aa17.04■□□□□ 0.32
RBFOX1-212ENST00000550418 RBM26Q5T8P6 1007 aaKnown RBP17.04■□□□□ 0.32
RBFOX1-212ENST00000550418 KRT80Q6KB66 452 aa17.04■□□□□ 0.32
RBFOX1-212ENST00000550418 BRINP3Q76B58 766 aa17.04■□□□□ 0.32
RBFOX1-212ENST00000550418 KRT27Q7Z3Y8 459 aa17.04■□□□□ 0.32
RBFOX1-212ENST00000550418 OXER1Q8TDS5 423 aa17.04■□□□□ 0.32
RBFOX1-212ENST00000550418 FUCA2Q9BTY2 467 aa17.04■□□□□ 0.32
RBFOX1-212ENST00000550418 ADD3Q9UEY8 706 aaKnown RBP17.04■□□□□ 0.32
RBFOX1-212ENST00000550418 LIMA1Q9UHB6 759 aaKnown RBP17.04■□□□□ 0.32
RBFOX1-212ENST00000550418 PTPRMP28827 1452 aa17.04■□□□□ 0.32
RBFOX1-212ENST00000550418 ARHGEF40Q8TER5 1519 aa17.04■□□□□ 0.32
RBFOX1-212ENST00000550418 PPP4R3CPQ6ZMV5 832 aa17.04■□□□□ 0.32
RBFOX1-212ENST00000550418 UNC13DQ70J99 1090 aa17.04■□□□□ 0.32
RBFOX1-212ENST00000550418 CEP70Q8NHQ1 597 aa17.04■□□□□ 0.32
RBFOX1-212ENST00000550418 TMEM51Q9NW97 253 aa17.04■□□□□ 0.32
RBFOX1-212ENST00000550418 ZFP69BQ9UJL9 534 aa17.04■□□□□ 0.32
RBFOX1-212ENST00000550418 GGA1Q9UJY5 639 aa17.04■□□□□ 0.32
RBFOX1-212ENST00000550418 KRT19P08727 400 aa17.03■□□□□ 0.32
RBFOX1-212ENST00000550418 SLC30A9Q6PML9 568 aa17.03■□□□□ 0.32
RBFOX1-212ENST00000550418 ARHGAP18Q8N392 663 aa17.03■□□□□ 0.32
RBFOX1-212ENST00000550418 MAML1Q92585 1016 aa17.03■□□□□ 0.32
RBFOX1-212ENST00000550418 STRBPQ96SI9 672 aaKnown RBP17.03■□□□□ 0.32
RBFOX1-212ENST00000550418 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.03■□□□□ 0.32
RBFOX1-212ENST00000550418 ZBTB1Q9Y2K1 713 aa17.03■□□□□ 0.32
RBFOX1-212ENST00000550418 CAMSAP1Q5T5Y3 1602 aa17.03■□□□□ 0.32
RBFOX1-212ENST00000550418 TTC36A6NLP5 189 aa17.03■□□□□ 0.32
RBFOX1-212ENST00000550418 PLEKHA8P1O95397 391 aa17.03■□□□□ 0.32
RBFOX1-212ENST00000550418 TBC1D10CQ8IV04 446 aa17.03■□□□□ 0.32
RBFOX1-212ENST00000550418 TEKT1Q969V4 418 aa17.03■□□□□ 0.32
RBFOX1-212ENST00000550418 SCINQ9Y6U3 715 aa17.03■□□□□ 0.32
RBFOX1-212ENST00000550418 WDR17Q8IZU2 1322 aa17.03■□□□□ 0.32
RBFOX1-212ENST00000550418 H7C0C1 242 aa17.03■□□□□ 0.32
RBFOX1-212ENST00000550418 KRT14P02533 472 aa17.03■□□□□ 0.32
RBFOX1-212ENST00000550418 ATP5OP48047 213 aa17.03■□□□□ 0.32
RBFOX1-212ENST00000550418 PPP2R5CQ13362 524 aa17.03■□□□□ 0.32
RBFOX1-212ENST00000550418 BYSLQ13895 437 aaKnown RBP17.03■□□□□ 0.32
RBFOX1-212ENST00000550418 CXorf38Q8TB03 319 aa17.03■□□□□ 0.32
RBFOX1-212ENST00000550418 CDC27P30260 824 aa17.02■□□□□ 0.32
RBFOX1-212ENST00000550418 CHRNDQ07001 517 aa17.02■□□□□ 0.32
RBFOX1-212ENST00000550418 FAM102BQ5T8I3 360 aa17.02■□□□□ 0.32
RBFOX1-212ENST00000550418 EPM2AIP1Q7L775 607 aaPredicted RBP17.02■□□□□ 0.32
RBFOX1-212ENST00000550418 PDZD8Q8NEN9 1154 aa17.02■□□□□ 0.32
RBFOX1-212ENST00000550418 LRGUKQ96M69 825 aa17.02■□□□□ 0.32
RBFOX1-212ENST00000550418 FGD4Q96M96 766 aa17.02■□□□□ 0.32
RBFOX1-212ENST00000550418 TGS1Q96RS0 853 aaKnown RBP17.02■□□□□ 0.32
RBFOX1-212ENST00000550418 IRAK4Q9NWZ3 460 aa17.02■□□□□ 0.32
RBFOX1-212ENST00000550418 PACSIN2Q9UNF0 486 aaPredicted RBP17.02■□□□□ 0.32
RBFOX1-212ENST00000550418 PCDHA1Q9Y5I3 950 aa17.02■□□□□ 0.32
RBFOX1-212ENST00000550418 GPC4O75487 556 aa17.02■□□□□ 0.32
RBFOX1-212ENST00000550418 NR1H3Q13133 447 aa17.02■□□□□ 0.32
RBFOX1-212ENST00000550418 LRRC14Q15048 493 aa17.02■□□□□ 0.32
RBFOX1-212ENST00000550418 SCYL2Q6P3W7 929 aa17.02■□□□□ 0.32
RBFOX1-212ENST00000550418 ITIH6Q6UXX5 1313 aa17.02■□□□□ 0.32
RBFOX1-212ENST00000550418 TRIML2Q8N7C3 387 aa17.02■□□□□ 0.32
RBFOX1-212ENST00000550418 L1RE1Q9UN81 338 aa17.02■□□□□ 0.32
RBFOX1-212ENST00000550418 UBN2Q6ZU65 1347 aa17.02■□□□□ 0.32
RBFOX1-212ENST00000550418 AP5Z1O43299 807 aa17.02■□□□□ 0.32
RBFOX1-212ENST00000550418 PLS3P13797 630 aa17.02■□□□□ 0.32
RBFOX1-212ENST00000550418 STMN1P16949 149 aa17.02■□□□□ 0.32
RBFOX1-212ENST00000550418 SEC24CP53992 1094 aa17.02■□□□□ 0.32
RBFOX1-212ENST00000550418 CDR2Q01850 454 aa17.02■□□□□ 0.32
RBFOX1-212ENST00000550418 EPHA10Q5JZY3 1008 aa17.02■□□□□ 0.32
RBFOX1-212ENST00000550418 CYB5R4Q7L1T6 521 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms