RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 MCOLN1Q9GZU1 580 aa9.1□□□□□ -0.95
DEPDC4-207ENST00000549249 UNC45AQ9H3U1 944 aa9.1□□□□□ -0.95
DEPDC4-207ENST00000549249 BLOC1S4Q9NUP1 217 aa9.1□□□□□ -0.95
DEPDC4-207ENST00000549249 PKD2L1Q9P0L9 805 aa9.1□□□□□ -0.95
DEPDC4-207ENST00000549249 ARID2Q68CP9 1835 aa9.1□□□□□ -0.95
DEPDC4-207ENST00000549249 A0A087WWV3 80 aa9.09□□□□□ -0.95
DEPDC4-207ENST00000549249 CTAGE5O15320 804 aa9.09□□□□□ -0.95
DEPDC4-207ENST00000549249 GAS7O60861 476 aa9.09□□□□□ -0.95
DEPDC4-207ENST00000549249 MED24O75448 989 aa9.09□□□□□ -0.95
DEPDC4-207ENST00000549249 STAM2O75886 525 aa9.09□□□□□ -0.95
DEPDC4-207ENST00000549249 SLFN14P0C7P3 912 aa9.09□□□□□ -0.95
DEPDC4-207ENST00000549249 SPATA31C1P0DKV0 1188 aa9.09□□□□□ -0.95
DEPDC4-207ENST00000549249 KCNA2P16389 499 aa9.09□□□□□ -0.95
DEPDC4-207ENST00000549249 CTGFP29279 349 aa9.09□□□□□ -0.95
DEPDC4-207ENST00000549249 MAPK4P31152 587 aa9.09□□□□□ -0.95
DEPDC4-207ENST00000549249 ICAM3P32942 547 aa9.09□□□□□ -0.95
DEPDC4-207ENST00000549249 TXLNAP40222 546 aa9.09□□□□□ -0.95
DEPDC4-207ENST00000549249 UBA7P41226 1012 aa9.09□□□□□ -0.95
DEPDC4-207ENST00000549249 STAT6P42226 847 aa9.09□□□□□ -0.95
DEPDC4-207ENST00000549249 PNOCQ13519 176 aa9.09□□□□□ -0.95
DEPDC4-207ENST00000549249 LRSAM1Q6UWE0 723 aa9.09□□□□□ -0.95
DEPDC4-207ENST00000549249 PLEKHH3Q7Z736 793 aa9.09□□□□□ -0.95
DEPDC4-207ENST00000549249 ELOA2Q8IYF1 753 aaPredicted RBP9.09□□□□□ -0.95
DEPDC4-207ENST00000549249 TTC13Q8NBP0 860 aa9.09□□□□□ -0.95
DEPDC4-207ENST00000549249 RIT2Q99578 217 aa9.09□□□□□ -0.95
DEPDC4-207ENST00000549249 BCAS3Q9H6U6 928 aa9.09□□□□□ -0.95
DEPDC4-207ENST00000549249 ZFYVE28Q9HCC9 887 aa9.09□□□□□ -0.95
DEPDC4-207ENST00000549249 ADD3Q9UEY8 706 aaKnown RBP9.09□□□□□ -0.95
DEPDC4-207ENST00000549249 USP25Q9UHP3 1055 aa9.09□□□□□ -0.95
DEPDC4-207ENST00000549249 SPATA31C2B4DYI2 1134 aa9.08□□□□□ -0.96
DEPDC4-207ENST00000549249 DDX39AO00148 427 aaKnown RBP9.08□□□□□ -0.96
DEPDC4-207ENST00000549249 CHMP2AO43633 222 aa9.08□□□□□ -0.96
DEPDC4-207ENST00000549249 STRNO43815 780 aa9.08□□□□□ -0.96
DEPDC4-207ENST00000549249 TRPA1O75762 1119 aa9.08□□□□□ -0.96
DEPDC4-207ENST00000549249 LETM1O95202 739 aaPredicted RBP9.08□□□□□ -0.96
DEPDC4-207ENST00000549249 CASP1P29466 404 aa9.08□□□□□ -0.96
DEPDC4-207ENST00000549249 CCT6AP40227 531 aaKnown RBP9.08□□□□□ -0.96
DEPDC4-207ENST00000549249 RGS19P49795 217 aa9.08□□□□□ -0.96
DEPDC4-207ENST00000549249 PDE4DQ08499 809 aa9.08□□□□□ -0.96
DEPDC4-207ENST00000549249 POSTNQ15063 836 aa9.08□□□□□ -0.96
DEPDC4-207ENST00000549249 ZRSR1Q15695 479 aaKnown RBP9.08□□□□□ -0.96
DEPDC4-207ENST00000549249 STXBP2Q15833 593 aa9.08□□□□□ -0.96
DEPDC4-207ENST00000549249 MORN1Q5T089 497 aa9.08□□□□□ -0.96
DEPDC4-207ENST00000549249 RRAGBQ5VZM2 374 aa9.08□□□□□ -0.96
DEPDC4-207ENST00000549249 KRT79Q5XKE5 535 aa9.08□□□□□ -0.96
DEPDC4-207ENST00000549249 NLRX1Q86UT6 975 aa9.08□□□□□ -0.96
DEPDC4-207ENST00000549249 IQUBQ8NA54 791 aa9.08□□□□□ -0.96
DEPDC4-207ENST00000549249 NPLOC4Q8TAT6 608 aa9.08□□□□□ -0.96
DEPDC4-207ENST00000549249 STAMQ92783 540 aa9.08□□□□□ -0.96
DEPDC4-207ENST00000549249 PAGE5Q96GU1 130 aa9.08□□□□□ -0.96
DEPDC4-207ENST00000549249 EIF2AK1Q9BQI3 630 aaKnown RBP9.08□□□□□ -0.96
DEPDC4-207ENST00000549249 SDF4Q9BRK5 362 aa9.08□□□□□ -0.96
DEPDC4-207ENST00000549249 PYM1Q9BRP8 204 aaKnown RBP9.08□□□□□ -0.96
DEPDC4-207ENST00000549249 TUBE1Q9UJT0 475 aa9.08□□□□□ -0.96
DEPDC4-207ENST00000549249 TELO2Q9Y4R8 837 aa9.08□□□□□ -0.96
DEPDC4-207ENST00000549249 MYH11P35749 1972 aa9.08□□□□□ -0.96
DEPDC4-207ENST00000549249 CASP8AP2Q9UKL3 1982 aa9.08□□□□□ -0.96
DEPDC4-207ENST00000549249 NFASCO94856 1347 aa9.07□□□□□ -0.96
DEPDC4-207ENST00000549249 KDM3AQ9Y4C1 1321 aa9.07□□□□□ -0.96
DEPDC4-207ENST00000549249 LOC102724159A0A0B4J2E5 919 aa9.07□□□□□ -0.96
DEPDC4-207ENST00000549249 FSD2A1L4K1 749 aa9.07□□□□□ -0.96
DEPDC4-207ENST00000549249 SLC15A5A6NIM6 579 aa9.07□□□□□ -0.96
DEPDC4-207ENST00000549249 TULP1O00294 542 aaPredicted RBP9.07□□□□□ -0.96
DEPDC4-207ENST00000549249 MAFGO15525 162 aa9.07□□□□□ -0.96
DEPDC4-207ENST00000549249 SLC26A4O43511 780 aa9.07□□□□□ -0.96
DEPDC4-207ENST00000549249 EIF3JO75822 258 aaKnown RBP9.07□□□□□ -0.96
DEPDC4-207ENST00000549249 ARIH2O95376 493 aa9.07□□□□□ -0.96
DEPDC4-207ENST00000549249 CCNE2O96020 404 aa9.07□□□□□ -0.96
DEPDC4-207ENST00000549249 RPA1P27694 616 aa9.07□□□□□ -0.96
DEPDC4-207ENST00000549249 AFMP43652 599 aa9.07□□□□□ -0.96
DEPDC4-207ENST00000549249 SARSP49591 514 aaKnown RBP9.07□□□□□ -0.96
DEPDC4-207ENST00000549249 CAP1Q01518 475 aa9.07□□□□□ -0.96
DEPDC4-207ENST00000549249 SP2Q02086 613 aa9.07□□□□□ -0.96
DEPDC4-207ENST00000549249 TYRO3Q06418 890 aa9.07□□□□□ -0.96
DEPDC4-207ENST00000549249 DPYDQ12882 1025 aa9.07□□□□□ -0.96
DEPDC4-207ENST00000549249 MCM6Q14566 821 aa9.07□□□□□ -0.96
DEPDC4-207ENST00000549249 PWP2Q15269 919 aaKnown RBP9.07□□□□□ -0.96
DEPDC4-207ENST00000549249 EPHA7Q15375 998 aa9.07□□□□□ -0.96
DEPDC4-207ENST00000549249 HAUS3Q68CZ6 603 aa9.07□□□□□ -0.96
DEPDC4-207ENST00000549249 ARMCX2Q7L311 632 aa9.07□□□□□ -0.96
DEPDC4-207ENST00000549249 EEPD1Q7L9B9 569 aa9.07□□□□□ -0.96
DEPDC4-207ENST00000549249 CATSPER3Q86XQ3 398 aa9.07□□□□□ -0.96
DEPDC4-207ENST00000549249 FBXO16Q8IX29 292 aaPredicted RBP9.07□□□□□ -0.96
DEPDC4-207ENST00000549249 CEP57L1Q8IYX8 460 aa9.07□□□□□ -0.96
DEPDC4-207ENST00000549249 RASSF8Q8NHQ8 419 aa9.07□□□□□ -0.96
DEPDC4-207ENST00000549249 SPATA20Q8TB22 786 aa9.07□□□□□ -0.96
DEPDC4-207ENST00000549249 RAD54LQ92698 747 aa9.07□□□□□ -0.96
DEPDC4-207ENST00000549249 USP6NLQ92738 828 aa9.07□□□□□ -0.96
DEPDC4-207ENST00000549249 CALML4Q96GE6 196 aa9.07□□□□□ -0.96
DEPDC4-207ENST00000549249 LRCH3Q96II8 777 aa9.07□□□□□ -0.96
DEPDC4-207ENST00000549249 DYDC2Q96IM9 177 aa9.07□□□□□ -0.96
DEPDC4-207ENST00000549249 MAML3Q96JK9 1138 aa9.07□□□□□ -0.96
DEPDC4-207ENST00000549249 POLR3CQ9BUI4 534 aaPredicted RBP9.07□□□□□ -0.96
DEPDC4-207ENST00000549249 KATNBL1Q9H079 304 aa9.07□□□□□ -0.96
DEPDC4-207ENST00000549249 TBC1D22BQ9NU19 505 aa9.07□□□□□ -0.96
DEPDC4-207ENST00000549249 KBTBD4Q9NVX7 518 aa9.07□□□□□ -0.96
DEPDC4-207ENST00000549249 RNF186Q9NXI6 227 aa9.07□□□□□ -0.96
DEPDC4-207ENST00000549249 RGL1Q9NZL6 768 aa9.07□□□□□ -0.96
DEPDC4-207ENST00000549249 WRAP73Q9P2S5 460 aaPredicted RBP9.07□□□□□ -0.96
DEPDC4-207ENST00000549249 STK17AQ9UEE5 414 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms