RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 ATP6V0A1Q93050 837 aa11.08□□□□□ -0.64
TNFRSF1A-214ENST00000543048 AGO4Q9HCK5 861 aaKnown RBP11.08□□□□□ -0.64
TNFRSF1A-214ENST00000543048 JPH1Q9HDC5 661 aaPredicted RBP11.08□□□□□ -0.64
TNFRSF1A-214ENST00000543048 CXXC1Q9P0U4 656 aaPredicted RBP11.08□□□□□ -0.64
TNFRSF1A-214ENST00000543048 SLC9A2Q9UBY0 812 aa11.08□□□□□ -0.64
TNFRSF1A-214ENST00000543048 TPCN1Q9ULQ1 816 aa11.08□□□□□ -0.64
TNFRSF1A-214ENST00000543048 SLC4A7Q9Y6M7 1214 aa11.08□□□□□ -0.64
TNFRSF1A-214ENST00000543048 GRXCR1A8MXD5 290 aa11.07□□□□□ -0.64
TNFRSF1A-214ENST00000543048 FAM86B1E9PN63 330 aa11.07□□□□□ -0.64
TNFRSF1A-214ENST00000543048 TREHO43280 583 aa11.07□□□□□ -0.64
TNFRSF1A-214ENST00000543048 FAM86B2P0C5J1 330 aa11.07□□□□□ -0.64
TNFRSF1A-214ENST00000543048 HOXC8P31273 242 aa11.07□□□□□ -0.64
TNFRSF1A-214ENST00000543048 USP11P51784 963 aa11.07□□□□□ -0.64
TNFRSF1A-214ENST00000543048 NEK4P51957 841 aa11.07□□□□□ -0.64
TNFRSF1A-214ENST00000543048 AK2P54819 239 aa11.07□□□□□ -0.64
TNFRSF1A-214ENST00000543048 SCRN1Q12765 414 aa11.07□□□□□ -0.64
TNFRSF1A-214ENST00000543048 TRIM71Q2Q1W2 868 aaKnown RBP11.07□□□□□ -0.64
TNFRSF1A-214ENST00000543048 ZNF618Q5T7W0 954 aa11.07□□□□□ -0.64
TNFRSF1A-214ENST00000543048 GALNT17Q6IS24 598 aa11.07□□□□□ -0.64
TNFRSF1A-214ENST00000543048 LRRC8DQ7L1W4 858 aa11.07□□□□□ -0.64
TNFRSF1A-214ENST00000543048 SERINC5Q86VE9 423 aa11.07□□□□□ -0.64
TNFRSF1A-214ENST00000543048 GLG1Q92896 1179 aa11.07□□□□□ -0.64
TNFRSF1A-214ENST00000543048 TNPO1Q92973 898 aaKnown RBP11.07□□□□□ -0.64
TNFRSF1A-214ENST00000543048 SETD4Q9NVD3 440 aa11.07□□□□□ -0.64
TNFRSF1A-214ENST00000543048 ERAP1Q9NZ08 941 aa11.07□□□□□ -0.64
TNFRSF1A-214ENST00000543048 PCDHA4Q9UN74 947 aa11.07□□□□□ -0.64
TNFRSF1A-214ENST00000543048 TMEM265A0A087WTH1 108 aa11.06□□□□□ -0.64
TNFRSF1A-214ENST00000543048 ZBBXA8MT70 800 aa11.06□□□□□ -0.64
TNFRSF1A-214ENST00000543048 LGR5O75473 907 aa11.06□□□□□ -0.64
TNFRSF1A-214ENST00000543048 ATG7O95352 703 aa11.06□□□□□ -0.64
TNFRSF1A-214ENST00000543048 CIITAP33076 1130 aa11.06□□□□□ -0.64
TNFRSF1A-214ENST00000543048 THPOP40225 353 aa11.06□□□□□ -0.64
TNFRSF1A-214ENST00000543048 ACTR2P61160 394 aa11.06□□□□□ -0.64
TNFRSF1A-214ENST00000543048 ITGB3BPQ13352 177 aaPredicted RBP11.06□□□□□ -0.64
TNFRSF1A-214ENST00000543048 GPNMBQ14956 572 aa11.06□□□□□ -0.64
TNFRSF1A-214ENST00000543048 PLPPR4Q7Z2D5 763 aa11.06□□□□□ -0.64
TNFRSF1A-214ENST00000543048 TRIM50Q86XT4 487 aa11.06□□□□□ -0.64
TNFRSF1A-214ENST00000543048 BLIDQ8IZY5 108 aa11.06□□□□□ -0.64
TNFRSF1A-214ENST00000543048 RASGRP4Q8TDF6 673 aa11.06□□□□□ -0.64
TNFRSF1A-214ENST00000543048 FAM161BQ96MY7 647 aa11.06□□□□□ -0.64
TNFRSF1A-214ENST00000543048 C22orf23Q9BZE7 217 aa11.06□□□□□ -0.64
TNFRSF1A-214ENST00000543048 AZI2Q9H6S1 392 aa11.06□□□□□ -0.64
TNFRSF1A-214ENST00000543048 TBC1D22BQ9NU19 505 aa11.06□□□□□ -0.64
TNFRSF1A-214ENST00000543048 MSRAQ9UJ68 235 aa11.06□□□□□ -0.64
TNFRSF1A-214ENST00000543048 NRCAMQ92823 1304 aa11.06□□□□□ -0.64
TNFRSF1A-214ENST00000543048 PTPRSQ13332 1948 aa11.05□□□□□ -0.64
TNFRSF1A-214ENST00000543048 IGLV3-22A0A075B6J6 115 aa11.05□□□□□ -0.64
TNFRSF1A-214ENST00000543048 RSPH10B2B2RC85 870 aa11.05□□□□□ -0.64
TNFRSF1A-214ENST00000543048 IPO5O00410 1097 aaKnown RBP11.05□□□□□ -0.64
TNFRSF1A-214ENST00000543048 DHX15O43143 795 aaKnown RBP11.05□□□□□ -0.64
TNFRSF1A-214ENST00000543048 NBNO60934 754 aa11.05□□□□□ -0.64
TNFRSF1A-214ENST00000543048 CXCL10P02778 98 aa11.05□□□□□ -0.64
TNFRSF1A-214ENST00000543048 RSPH10BP0C881 870 aa11.05□□□□□ -0.64
TNFRSF1A-214ENST00000543048 DNAJB2P25686 324 aa11.05□□□□□ -0.64
TNFRSF1A-214ENST00000543048 STAT5BP51692 787 aa11.05□□□□□ -0.64
TNFRSF1A-214ENST00000543048 ADAM17P78536 824 aa11.05□□□□□ -0.64
TNFRSF1A-214ENST00000543048 SETQ01105 290 aaPredicted RBP11.05□□□□□ -0.64
TNFRSF1A-214ENST00000543048 RAB30Q15771 203 aa11.05□□□□□ -0.64
TNFRSF1A-214ENST00000543048 TRAF7Q6Q0C0 670 aa11.05□□□□□ -0.64
TNFRSF1A-214ENST00000543048 MICAL3Q7RTP6 2002 aa11.05□□□□□ -0.64
TNFRSF1A-214ENST00000543048 PHOSPHO2Q8TCD6 241 aa11.05□□□□□ -0.64
TNFRSF1A-214ENST00000543048 WNT8BQ93098 351 aa11.05□□□□□ -0.64
TNFRSF1A-214ENST00000543048 TIFAQ96CG3 184 aa11.05□□□□□ -0.64
TNFRSF1A-214ENST00000543048 PCYT2Q99447 389 aa11.05□□□□□ -0.64
TNFRSF1A-214ENST00000543048 ZNF577Q9BSK1 485 aa11.05□□□□□ -0.64
TNFRSF1A-214ENST00000543048 PBX4Q9BYU1 374 aa11.05□□□□□ -0.64
TNFRSF1A-214ENST00000543048 TTYH1Q9H313 450 aaPredicted RBP11.05□□□□□ -0.64
TNFRSF1A-214ENST00000543048 STXBP5LQ9Y2K9 1186 aa11.05□□□□□ -0.64
TNFRSF1A-214ENST00000543048 EMSYQ7Z589 1322 aa11.05□□□□□ -0.64
TNFRSF1A-214ENST00000543048 IGKV6D-21A0A0A0MT36 114 aa11.04□□□□□ -0.64
TNFRSF1A-214ENST00000543048 RRN3P2A6NIE6 340 aa11.04□□□□□ -0.64
TNFRSF1A-214ENST00000543048 DDX39AO00148 427 aaKnown RBP11.04□□□□□ -0.64
TNFRSF1A-214ENST00000543048 EDIL3O43854 480 aa11.04□□□□□ -0.64
TNFRSF1A-214ENST00000543048 CAND2O75155 1236 aa11.04□□□□□ -0.64
TNFRSF1A-214ENST00000543048 BAIAP3O94812 1187 aa11.04□□□□□ -0.64
TNFRSF1A-214ENST00000543048 ATP2A2P16615 1042 aaKnown RBP11.04□□□□□ -0.64
TNFRSF1A-214ENST00000543048 XBP1P17861 261 aa11.04□□□□□ -0.64
TNFRSF1A-214ENST00000543048 MARK3P27448 753 aa11.04□□□□□ -0.64
TNFRSF1A-214ENST00000543048 PBX2P40425 430 aa11.04□□□□□ -0.64
TNFRSF1A-214ENST00000543048 PPFIA1Q13136 1202 aa11.04□□□□□ -0.64
TNFRSF1A-214ENST00000543048 IKBKEQ14164 716 aa11.04□□□□□ -0.64
TNFRSF1A-214ENST00000543048 GRIK4Q16099 956 aa11.04□□□□□ -0.64
TNFRSF1A-214ENST00000543048 ME3Q16798 604 aa11.04□□□□□ -0.64
TNFRSF1A-214ENST00000543048 PRR16Q569H4 304 aa11.04□□□□□ -0.64
TNFRSF1A-214ENST00000543048 CNKSR3Q6P9H4 555 aa11.04□□□□□ -0.64
TNFRSF1A-214ENST00000543048 ABHD15Q6UXT9 468 aa11.04□□□□□ -0.64
TNFRSF1A-214ENST00000543048 NECAB1Q8N987 351 aa11.04□□□□□ -0.64
TNFRSF1A-214ENST00000543048 DAGLBQ8NCG7 672 aa11.04□□□□□ -0.64
TNFRSF1A-214ENST00000543048 LMBR1Q8WVP7 490 aa11.04□□□□□ -0.64
TNFRSF1A-214ENST00000543048 WASF1Q92558 559 aa11.04□□□□□ -0.64
TNFRSF1A-214ENST00000543048 AIFM3Q96NN9 605 aa11.04□□□□□ -0.64
TNFRSF1A-214ENST00000543048 GUCD1Q96NT3 240 aa11.04□□□□□ -0.64
TNFRSF1A-214ENST00000543048 UIMC1Q96RL1 719 aa11.04□□□□□ -0.64
TNFRSF1A-214ENST00000543048 CDX2Q99626 313 aaPredicted RBP11.04□□□□□ -0.64
TNFRSF1A-214ENST00000543048 ZNF576Q9H609 170 aa11.04□□□□□ -0.64
TNFRSF1A-214ENST00000543048 ORC3Q9UBD5 711 aaPredicted RBP11.04□□□□□ -0.64
TNFRSF1A-214ENST00000543048 COL6A3P12111 3177 aa11.04□□□□□ -0.64
TNFRSF1A-214ENST00000543048 STK36Q9NRP7 1315 aa11.04□□□□□ -0.64
TNFRSF1A-214ENST00000543048 CYP3A7-CYP3A51PA0A087WV96 503 aa11.03□□□□□ -0.64
TNFRSF1A-214ENST00000543048 ABHD14A-ACY1A0A1B0GW23 586 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms