RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 PLEKHG4Q58EX7 1191 aa9.73□□□□□ -0.85
SFSWAP-202ENST00000535202 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.73□□□□□ -0.85
SFSWAP-202ENST00000535202 RUFY4Q6ZNE9 571 aa9.73□□□□□ -0.85
SFSWAP-202ENST00000535202 MTERF4Q7Z6M4 381 aaKnown RBP9.73□□□□□ -0.85
SFSWAP-202ENST00000535202 TEX2Q8IWB9 1127 aa9.73□□□□□ -0.85
SFSWAP-202ENST00000535202 MYOCDQ8IZQ8 938 aa9.73□□□□□ -0.85
SFSWAP-202ENST00000535202 CCDC12Q8WUD4 166 aaPredicted RBP9.73□□□□□ -0.85
SFSWAP-202ENST00000535202 SEPT8Q92599 483 aa9.73□□□□□ -0.85
SFSWAP-202ENST00000535202 SLC26A6Q9BXS9 759 aa9.73□□□□□ -0.85
SFSWAP-202ENST00000535202 AGXT2Q9BYV1 514 aa9.73□□□□□ -0.85
SFSWAP-202ENST00000535202 AZI2Q9H6S1 392 aa9.73□□□□□ -0.85
SFSWAP-202ENST00000535202 AGO4Q9HCK5 861 aaKnown RBP9.73□□□□□ -0.85
SFSWAP-202ENST00000535202 C6orf50Q9HD87 102 aa9.73□□□□□ -0.85
SFSWAP-202ENST00000535202 NFASCO94856 1347 aa9.73□□□□□ -0.85
SFSWAP-202ENST00000535202 ESYT2A0FGR8 921 aa9.72□□□□□ -0.85
SFSWAP-202ENST00000535202 ADAMTS3O15072 1205 aa9.72□□□□□ -0.85
SFSWAP-202ENST00000535202 GTPBP6O43824 516 aaPredicted RBP9.72□□□□□ -0.85
SFSWAP-202ENST00000535202 GJB5O95377 273 aa9.72□□□□□ -0.85
SFSWAP-202ENST00000535202 AMHP03971 560 aa9.72□□□□□ -0.85
SFSWAP-202ENST00000535202 ACTR2P61160 394 aa9.72□□□□□ -0.85
SFSWAP-202ENST00000535202 RBM10P98175 930 aaKnown RBP9.72□□□□□ -0.85
SFSWAP-202ENST00000535202 ITGB3BPQ13352 177 aaPredicted RBP9.72□□□□□ -0.85
SFSWAP-202ENST00000535202 PKN1Q16512 942 aa9.72□□□□□ -0.85
SFSWAP-202ENST00000535202 TAF2Q6P1X5 1199 aa9.72□□□□□ -0.85
SFSWAP-202ENST00000535202 RUFY3Q7L099 469 aa9.72□□□□□ -0.85
SFSWAP-202ENST00000535202 SPRED2Q7Z698 418 aa9.72□□□□□ -0.85
SFSWAP-202ENST00000535202 PLA2G4DQ86XP0 818 aa9.72□□□□□ -0.85
SFSWAP-202ENST00000535202 FBXL16Q8N461 479 aa9.72□□□□□ -0.85
SFSWAP-202ENST00000535202 UIMC1Q96RL1 719 aa9.72□□□□□ -0.85
SFSWAP-202ENST00000535202 PCYT2Q99447 389 aa9.72□□□□□ -0.85
SFSWAP-202ENST00000535202 OSBPL7Q9BZF2 842 aa9.72□□□□□ -0.85
SFSWAP-202ENST00000535202 ZMYND12Q9H0C1 365 aa9.72□□□□□ -0.85
SFSWAP-202ENST00000535202 NCOA5Q9HCD5 579 aaKnown RBP9.72□□□□□ -0.85
SFSWAP-202ENST00000535202 THEGQ9P2T0 379 aa9.72□□□□□ -0.85
SFSWAP-202ENST00000535202 TUBE1Q9UJT0 475 aa9.72□□□□□ -0.85
SFSWAP-202ENST00000535202 TRPC6Q9Y210 931 aa9.72□□□□□ -0.85
SFSWAP-202ENST00000535202 CYP46A1Q9Y6A2 500 aa9.72□□□□□ -0.85
SFSWAP-202ENST00000535202 EYSQ5T1H1 3165 aa9.71□□□□□ -0.85
SFSWAP-202ENST00000535202 FAM86B1E9PN63 330 aa9.71□□□□□ -0.86
SFSWAP-202ENST00000535202 MEIS1O00470 390 aa9.71□□□□□ -0.86
SFSWAP-202ENST00000535202 EPB41L2O43491 1005 aaKnown RBP9.71□□□□□ -0.86
SFSWAP-202ENST00000535202 FAM86B2P0C5J1 330 aa9.71□□□□□ -0.86
SFSWAP-202ENST00000535202 GHRP10912 638 aa9.71□□□□□ -0.86
SFSWAP-202ENST00000535202 INSRRP14616 1297 aa9.71□□□□□ -0.86
SFSWAP-202ENST00000535202 GNA11P29992 359 aa9.71□□□□□ -0.86
SFSWAP-202ENST00000535202 PDIA3P30101 505 aaKnown RBP9.71□□□□□ -0.86
SFSWAP-202ENST00000535202 TOB2Q14106 344 aaPredicted RBP9.71□□□□□ -0.86
SFSWAP-202ENST00000535202 SKIV2LQ15477 1246 aaKnown RBP9.71□□□□□ -0.86
SFSWAP-202ENST00000535202 NTRK3Q16288 839 aa9.71□□□□□ -0.86
SFSWAP-202ENST00000535202 FAM26DQ5JW98 314 aa9.71□□□□□ -0.86
SFSWAP-202ENST00000535202 KRT40Q6A162 431 aa9.71□□□□□ -0.86
SFSWAP-202ENST00000535202 RSPH3Q86UC2 560 aa9.71□□□□□ -0.86
SFSWAP-202ENST00000535202 REXO1Q8N1G1 1221 aaKnown RBP9.71□□□□□ -0.86
SFSWAP-202ENST00000535202 CCDC148Q8NFR7 591 aa9.71□□□□□ -0.86
SFSWAP-202ENST00000535202 RASGRP4Q8TDF6 673 aa9.71□□□□□ -0.86
SFSWAP-202ENST00000535202 DNAJB3Q8WWF6 145 aa9.71□□□□□ -0.86
SFSWAP-202ENST00000535202 ZBTB10Q96DT7 871 aa9.71□□□□□ -0.86
SFSWAP-202ENST00000535202 RAD9AQ99638 391 aa9.71□□□□□ -0.86
SFSWAP-202ENST00000535202 LARP6Q9BRS8 491 aaKnown RBP9.71□□□□□ -0.86
SFSWAP-202ENST00000535202 RNF26Q9BY78 433 aaPredicted RBP9.71□□□□□ -0.86
SFSWAP-202ENST00000535202 IFIH1Q9BYX4 1025 aaKnown RBP9.71□□□□□ -0.86
SFSWAP-202ENST00000535202 ZSWIM6Q9HCJ5 1215 aa9.71□□□□□ -0.86
SFSWAP-202ENST00000535202 VPS54Q9P1Q0 977 aa9.71□□□□□ -0.86
SFSWAP-202ENST00000535202 PRDM4Q9UKN5 801 aa9.71□□□□□ -0.86
SFSWAP-202ENST00000535202 MTUS1Q9ULD2 1270 aa9.71□□□□□ -0.86
SFSWAP-202ENST00000535202 MTCH2Q9Y6C9 303 aa9.71□□□□□ -0.86
SFSWAP-202ENST00000535202 MBLAC1A4D2B0 266 aaPredicted RBP9.7□□□□□ -0.86
SFSWAP-202ENST00000535202 LINC01553A4QN01 128 aa9.7□□□□□ -0.86
SFSWAP-202ENST00000535202 RRN3P2A6NIE6 340 aa9.7□□□□□ -0.86
SFSWAP-202ENST00000535202 BACH1O14867 736 aa9.7□□□□□ -0.86
SFSWAP-202ENST00000535202 UPP2O95045 317 aa9.7□□□□□ -0.86
SFSWAP-202ENST00000535202 CCNE2O96020 404 aa9.7□□□□□ -0.86
SFSWAP-202ENST00000535202 CHRNA1P02708 482 aa9.7□□□□□ -0.86
SFSWAP-202ENST00000535202 CYP3A4P08684 503 aa9.7□□□□□ -0.86
SFSWAP-202ENST00000535202 IFNAR1P17181 557 aa9.7□□□□□ -0.86
SFSWAP-202ENST00000535202 STAT5BP51692 787 aa9.7□□□□□ -0.86
SFSWAP-202ENST00000535202 EVCP57679 992 aa9.7□□□□□ -0.86
SFSWAP-202ENST00000535202 SETQ01105 290 aaPredicted RBP9.7□□□□□ -0.86
SFSWAP-202ENST00000535202 MGAT3Q09327 533 aa9.7□□□□□ -0.86
SFSWAP-202ENST00000535202 STK3Q13188 491 aa9.7□□□□□ -0.86
SFSWAP-202ENST00000535202 GRB10Q13322 594 aa9.7□□□□□ -0.86
SFSWAP-202ENST00000535202 MKRN4PQ13434 485 aaPredicted RBP9.7□□□□□ -0.86
SFSWAP-202ENST00000535202 PLCB4Q15147 1175 aa9.7□□□□□ -0.86
SFSWAP-202ENST00000535202 TJAP1Q5JTD0 557 aa9.7□□□□□ -0.86
SFSWAP-202ENST00000535202 MARCH8Q5T0T0 291 aa9.7□□□□□ -0.86
SFSWAP-202ENST00000535202 FAM160B1Q5W0V3 765 aa9.7□□□□□ -0.86
SFSWAP-202ENST00000535202 MCTP2Q6DN12 878 aa9.7□□□□□ -0.86
SFSWAP-202ENST00000535202 NIPA1Q7RTP0 329 aa9.7□□□□□ -0.86
SFSWAP-202ENST00000535202 PLPPR4Q7Z2D5 763 aa9.7□□□□□ -0.86
SFSWAP-202ENST00000535202 RPAINQ86UA6 219 aa9.7□□□□□ -0.86
SFSWAP-202ENST00000535202 SMAP1Q8IYB5 467 aaPredicted RBP9.7□□□□□ -0.86
SFSWAP-202ENST00000535202 TRIM22Q8IYM9 498 aa9.7□□□□□ -0.86
SFSWAP-202ENST00000535202 BICD2Q8TD16 824 aa9.7□□□□□ -0.86
SFSWAP-202ENST00000535202 GDPD5Q8WTR4 605 aa9.7□□□□□ -0.86
SFSWAP-202ENST00000535202 TRAPPC12Q8WVT3 735 aa9.7□□□□□ -0.86
SFSWAP-202ENST00000535202 SYMPKQ92797 1274 aaKnown RBP9.7□□□□□ -0.86
SFSWAP-202ENST00000535202 APBB2Q92870 758 aa9.7□□□□□ -0.86
SFSWAP-202ENST00000535202 TNPO1Q92973 898 aaKnown RBP9.7□□□□□ -0.86
SFSWAP-202ENST00000535202 TGS1Q96RS0 853 aaKnown RBP9.7□□□□□ -0.86
SFSWAP-202ENST00000535202 ZNF577Q9BSK1 485 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms