RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 NR2E3Q9Y5X4 410 aa15.84■□□□□ 0.13
VPS11-205ENST00000534551 IGSF9BQ9UPX0 1349 aa15.84■□□□□ 0.13
VPS11-205ENST00000534551 LAMA2P24043 3122 aaKnown RBP15.83■□□□□ 0.12
VPS11-205ENST00000534551 IGKV6D-21A0A0A0MT36 114 aa15.83■□□□□ 0.12
VPS11-205ENST00000534551 MAGEA10P43363 369 aaPredicted RBP15.83■□□□□ 0.12
VPS11-205ENST00000534551 CALCRLQ16602 461 aa15.83■□□□□ 0.12
VPS11-205ENST00000534551 MIS18BP1Q6P0N0 1132 aa15.83■□□□□ 0.12
VPS11-205ENST00000534551 LMBR1Q8WVP7 490 aa15.83■□□□□ 0.12
VPS11-205ENST00000534551 TOX2Q96NM4 488 aa15.83■□□□□ 0.12
VPS11-205ENST00000534551 RIT2Q99578 217 aa15.83■□□□□ 0.12
VPS11-205ENST00000534551 DISC1Q9NRI5 854 aa15.83■□□□□ 0.12
VPS11-205ENST00000534551 GABBR1Q9UBS5 961 aa15.83■□□□□ 0.12
VPS11-205ENST00000534551 TCEAL9Q9UHQ7 104 aa15.83■□□□□ 0.12
VPS11-205ENST00000534551 TMEM150BA6NC51 233 aa15.82■□□□□ 0.12
VPS11-205ENST00000534551 WDR64B1ANS9 1081 aa15.82■□□□□ 0.12
VPS11-205ENST00000534551 KIAA0355O15063 1070 aa15.82■□□□□ 0.12
VPS11-205ENST00000534551 TLR3O15455 904 aaKnown RBP15.82■□□□□ 0.12
VPS11-205ENST00000534551 ATP4AP20648 1035 aa15.82■□□□□ 0.12
VPS11-205ENST00000534551 CYP2C18P33260 490 aa15.82■□□□□ 0.12
VPS11-205ENST00000534551 IGBP1P78318 339 aa15.82■□□□□ 0.12
VPS11-205ENST00000534551 SPIRE1Q08AE8 756 aa15.82■□□□□ 0.12
VPS11-205ENST00000534551 PKP1Q13835 747 aa15.82■□□□□ 0.12
VPS11-205ENST00000534551 PLCB4Q15147 1175 aa15.82■□□□□ 0.12
VPS11-205ENST00000534551 PTGISQ16647 500 aa15.82■□□□□ 0.12
VPS11-205ENST00000534551 PRPF38BQ5VTL8 546 aaKnown RBP15.82■□□□□ 0.12
VPS11-205ENST00000534551 FOXD4L5Q5VV16 416 aaPredicted RBP15.82■□□□□ 0.12
VPS11-205ENST00000534551 NCAPH2Q6IBW4 605 aa15.82■□□□□ 0.12
VPS11-205ENST00000534551 SWSAP1Q6NVH7 229 aa15.82■□□□□ 0.12
VPS11-205ENST00000534551 FAM173BQ6P4H8 233 aa15.82■□□□□ 0.12
VPS11-205ENST00000534551 MIER3Q7Z3K6 550 aa15.82■□□□□ 0.12
VPS11-205ENST00000534551 BANK1Q8NDB2 785 aa15.82■□□□□ 0.12
VPS11-205ENST00000534551 FOXD4L4Q8WXT5 416 aaPredicted RBP15.82■□□□□ 0.12
VPS11-205ENST00000534551 BADQ92934 168 aa15.82■□□□□ 0.12
VPS11-205ENST00000534551 NOC4LQ9BVI4 516 aaKnown RBP15.82■□□□□ 0.12
VPS11-205ENST00000534551 WNT8AQ9H1J5 351 aa15.82■□□□□ 0.12
VPS11-205ENST00000534551 SMARCAD1Q9H4L7 1026 aa15.82■□□□□ 0.12
VPS11-205ENST00000534551 AZI2Q9H6S1 392 aa15.82■□□□□ 0.12
VPS11-205ENST00000534551 ZNF302Q9NR11 478 aa15.82■□□□□ 0.12
VPS11-205ENST00000534551 SETD4Q9NVD3 440 aa15.82■□□□□ 0.12
VPS11-205ENST00000534551 ERAP1Q9NZ08 941 aa15.82■□□□□ 0.12
VPS11-205ENST00000534551 NOL7Q9UMY1 257 aaKnown RBP15.82■□□□□ 0.12
VPS11-205ENST00000534551 MTMR6Q9Y217 621 aa15.82■□□□□ 0.12
VPS11-205ENST00000534551 PTPRSQ13332 1948 aa15.82■□□□□ 0.12
VPS11-205ENST00000534551 POTEMA6NI47 508 aa15.81■□□□□ 0.12
VPS11-205ENST00000534551 TREHO43280 583 aa15.81■□□□□ 0.12
VPS11-205ENST00000534551 ZNF862O60290 1169 aa15.81■□□□□ 0.12
VPS11-205ENST00000534551 HSP90AA1P07900 732 aaKnown RBP15.81■□□□□ 0.12
VPS11-205ENST00000534551 HOXC8P31273 242 aa15.81■□□□□ 0.12
VPS11-205ENST00000534551 TXKP42681 527 aa15.81■□□□□ 0.12
VPS11-205ENST00000534551 STAT5BP51692 787 aa15.81■□□□□ 0.12
VPS11-205ENST00000534551 RESTQ13127 1097 aa15.81■□□□□ 0.12
VPS11-205ENST00000534551 PPFIA1Q13136 1202 aa15.81■□□□□ 0.12
VPS11-205ENST00000534551 GRIK4Q16099 956 aa15.81■□□□□ 0.12
VPS11-205ENST00000534551 PDXDC2PQ6P474 469 aa15.81■□□□□ 0.12
VPS11-205ENST00000534551 CHRDL2Q6WN34 429 aa15.81■□□□□ 0.12
VPS11-205ENST00000534551 SMAP1Q8IYB5 467 aaPredicted RBP15.81■□□□□ 0.12
VPS11-205ENST00000534551 AFAP1L1Q8TED9 768 aa15.81■□□□□ 0.12
VPS11-205ENST00000534551 MTMR9Q96QG7 549 aa15.81■□□□□ 0.12
VPS11-205ENST00000534551 NAP1L4Q99733 375 aaKnown RBP15.81■□□□□ 0.12
VPS11-205ENST00000534551 FTOQ9C0B1 505 aaKnown RBP eCLIP15.81■□□□□ 0.12
VPS11-205ENST00000534551 HIPK3Q9H422 1215 aa15.81■□□□□ 0.12
VPS11-205ENST00000534551 PRKAG2Q9UGJ0 569 aa15.81■□□□□ 0.12
VPS11-205ENST00000534551 TRPC6Q9Y210 931 aa15.81■□□□□ 0.12
VPS11-205ENST00000534551 NOD1Q9Y239 953 aa15.81■□□□□ 0.12
VPS11-205ENST00000534551 GBF1Q92538 1859 aa15.8■□□□□ 0.12
VPS11-205ENST00000534551 C17orf102A2RUQ5 167 aa15.8■□□□□ 0.12
VPS11-205ENST00000534551 TBX3O15119 743 aa15.8■□□□□ 0.12
VPS11-205ENST00000534551 MARCH6O60337 910 aa15.8■□□□□ 0.12
VPS11-205ENST00000534551 PSAPP07602 524 aa15.8■□□□□ 0.12
VPS11-205ENST00000534551 OR52Z1P0C646 297 aa15.8■□□□□ 0.12
VPS11-205ENST00000534551 RAG1P15918 1043 aa15.8■□□□□ 0.12
VPS11-205ENST00000534551 EPHB4P54760 987 aa15.8■□□□□ 0.12
VPS11-205ENST00000534551 CCL23P55773 120 aa15.8■□□□□ 0.12
VPS11-205ENST00000534551 PRKCEQ02156 737 aa15.8■□□□□ 0.12
VPS11-205ENST00000534551 PTPN11Q06124 597 aaPredicted RBP15.8■□□□□ 0.12
VPS11-205ENST00000534551 PPP2R5CQ13362 524 aa15.8■□□□□ 0.12
VPS11-205ENST00000534551 RUFY4Q6ZNE9 571 aa15.8■□□□□ 0.12
VPS11-205ENST00000534551 ATP6V0A1Q93050 837 aa15.8■□□□□ 0.12
VPS11-205ENST00000534551 SCLYQ96I15 445 aa15.8■□□□□ 0.12
VPS11-205ENST00000534551 FAM20AQ96MK3 541 aa15.8■□□□□ 0.12
VPS11-205ENST00000534551 WRAP73Q9P2S5 460 aaPredicted RBP15.8■□□□□ 0.12
VPS11-205ENST00000534551 PCDHA10Q9Y5I2 948 aa15.8■□□□□ 0.12
VPS11-205ENST00000534551 LAMA3Q16787 3333 aa15.8■□□□□ 0.12
VPS11-205ENST00000534551 INSRRP14616 1297 aa15.79■□□□□ 0.12
VPS11-205ENST00000534551 TRAPPC10P48553 1259 aa15.79■□□□□ 0.12
VPS11-205ENST00000534551 JAK3P52333 1124 aa15.79■□□□□ 0.12
VPS11-205ENST00000534551 CYP4A11Q02928 519 aa15.79■□□□□ 0.12
VPS11-205ENST00000534551 TRIM71Q2Q1W2 868 aaKnown RBP15.79■□□□□ 0.12
VPS11-205ENST00000534551 FAM160B1Q5W0V3 765 aa15.79■□□□□ 0.12
VPS11-205ENST00000534551 PLPPR4Q7Z2D5 763 aa15.79■□□□□ 0.12
VPS11-205ENST00000534551 CKAP2LQ8IYA6 745 aa15.79■□□□□ 0.12
VPS11-205ENST00000534551 C4orf32Q8N8J7 132 aa15.79■□□□□ 0.12
VPS11-205ENST00000534551 SH2D3AQ9BRG2 576 aa15.79■□□□□ 0.12
VPS11-205ENST00000534551 TTC12Q9H892 705 aaPredicted RBP15.79■□□□□ 0.12
VPS11-205ENST00000534551 MAFBQ9Y5Q3 323 aaPredicted RBP15.79■□□□□ 0.12
VPS11-205ENST00000534551 POTEB3A0JP26 581 aa15.78■□□□□ 0.12
VPS11-205ENST00000534551 ZBTB42B2RXF5 422 aa15.78■□□□□ 0.12
VPS11-205ENST00000534551 STX6O43752 255 aa15.78■□□□□ 0.12
VPS11-205ENST00000534551 TIMP1P01033 207 aa15.78■□□□□ 0.12
VPS11-205ENST00000534551 CTSHP09668 335 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms